RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 CENPLQ8N0S6 344 aaPredicted RBP12.18□□□□□ -0.46
SYCN-201ENST00000318438 TNIP2Q8NFZ5 429 aa12.18□□□□□ -0.46
SYCN-201ENST00000318438 TTLQ8NG68 377 aa12.18□□□□□ -0.46
SYCN-201ENST00000318438 SLC44A1Q8WWI5 657 aa12.18□□□□□ -0.46
SYCN-201ENST00000318438 MRRFQ96E11 262 aaKnown RBP12.18□□□□□ -0.46
SYCN-201ENST00000318438 OR1F2PQ96R84 312 aa12.18□□□□□ -0.46
SYCN-201ENST00000318438 ATOH8Q96SQ7 321 aa12.18□□□□□ -0.46
SYCN-201ENST00000318438 PITHD1Q9GZP4 211 aaPredicted RBP12.18□□□□□ -0.46
SYCN-201ENST00000318438 SNX15Q9NRS6 342 aa12.18□□□□□ -0.46
SYCN-201ENST00000318438 SPRR3Q9UBC9 169 aa12.18□□□□□ -0.46
SYCN-201ENST00000318438 ADGRE2Q9UHX3 823 aa12.18□□□□□ -0.46
SYCN-201ENST00000318438 PTBP2Q9UKA9 531 aaKnown RBP12.18□□□□□ -0.46
SYCN-201ENST00000318438 ERVK-11Q9UQG0 969 aa12.18□□□□□ -0.46
SYCN-201ENST00000318438 ACOT9Q9Y305 439 aa12.18□□□□□ -0.46
SYCN-201ENST00000318438 TRBV11-1A0A0K0K1C0 115 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 ATP6AP2A0A1C7CYW4 349 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 SAGE2PA6NJ88 616 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 SYCE1LA8MT33 242 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 SUPT3HB4E1H0 165 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 GALR3O60755 368 aaPredicted RBP12.17□□□□□ -0.46
SYCN-201ENST00000318438 H2AFYO75367 372 aaKnown RBP12.17□□□□□ -0.46
SYCN-201ENST00000318438 SUPT3HO75486 399 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 ATP6AP2O75787 350 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 ALDOAP04075 364 aaKnown RBP12.17□□□□□ -0.46
SYCN-201ENST00000318438 SERPIND1P05546 499 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 C2P06681 752 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 SERPINA6P08185 405 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 INHBAP08476 426 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 GABRA1P14867 456 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 ENDOUP21128 410 aaKnown RBP12.17□□□□□ -0.46
SYCN-201ENST00000318438 SLBPQ14493 270 aaKnown RBP eCLIP12.17□□□□□ -0.46
SYCN-201ENST00000318438 RBBP5Q15291 538 aaKnown RBP12.17□□□□□ -0.46
SYCN-201ENST00000318438 PDK4Q16654 411 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 FAM83EQ2M2I3 478 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 KRTAP24-1Q3LI83 254 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 DEFB134Q4QY38 66 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 TMIGD1Q6UXZ0 262 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 LRRC70Q7Z2Q7 622 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 IFT20Q8IY31 132 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.17□□□□□ -0.46
SYCN-201ENST00000318438 KRT78Q8N1N4 520 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 FAM109AQ8N4B1 249 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 MAPK1IP1LQ8NDC0 245 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 NFAM1Q8NET5 270 aaPredicted RBP12.17□□□□□ -0.46
SYCN-201ENST00000318438 OR5T3Q8NGG3 340 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 RHEBL1Q8TAI7 183 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 UBTD2Q8WUN7 234 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 KCTD4Q8WVF5 259 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 EXT2Q93063 718 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 ISL2Q96A47 359 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 SARAFQ96BY9 339 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 NXNL1Q96CM4 212 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 PAFAH2Q99487 392 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 CCL19Q99731 98 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 LDAHQ9H6V9 325 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 EXO5Q9H790 373 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 NT5DC2Q9H857 520 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 NPFFR2Q9Y5X5 522 aa12.17□□□□□ -0.46
SYCN-201ENST00000318438 A0A096LPK6 155 aa12.16□□□□□ -0.46
SYCN-201ENST00000318438 A8MUA0 341 aa12.16□□□□□ -0.46
SYCN-201ENST00000318438 CLGNO14967 610 aa12.16□□□□□ -0.46
SYCN-201ENST00000318438 SUSD5O60279 629 aa12.16□□□□□ -0.46
SYCN-201ENST00000318438 ZNF888P0CJ79 500 aaPredicted RBP12.16□□□□□ -0.46
SYCN-201ENST00000318438 TYK2P29597 1187 aa12.16□□□□□ -0.46
SYCN-201ENST00000318438 KCNC1P48547 511 aa12.16□□□□□ -0.46
SYCN-201ENST00000318438 SERPINB9P50453 376 aa12.16□□□□□ -0.46
SYCN-201ENST00000318438 AGFG1P52594 562 aaKnown RBP12.16□□□□□ -0.46
SYCN-201ENST00000318438 STXBP1P61764 594 aaKnown RBP12.16□□□□□ -0.46
SYCN-201ENST00000318438 SORDQ00796 357 aa12.16□□□□□ -0.46
SYCN-201ENST00000318438 IRF9Q00978 393 aa12.16□□□□□ -0.46
SYCN-201ENST00000318438 RUNX1T1Q06455 604 aa12.16□□□□□ -0.46
SYCN-201ENST00000318438 HYAL2Q12891 473 aa12.16□□□□□ -0.46
SYCN-201ENST00000318438 FBXO48Q5FWF7 155 aa12.16□□□□□ -0.46
SYCN-201ENST00000318438 HEPHL1Q6MZM0 1159 aa12.16□□□□□ -0.46
SYCN-201ENST00000318438 KLC3Q6P597 504 aa12.16□□□□□ -0.46
SYCN-201ENST00000318438 SNX31Q8N9S9 440 aa12.16□□□□□ -0.46
SYCN-201ENST00000318438 PPP1R14CQ8TAE6 165 aa12.16□□□□□ -0.46
SYCN-201ENST00000318438 UTP15Q8TED0 518 aaKnown RBP12.16□□□□□ -0.46
SYCN-201ENST00000318438 SMPDL3BQ92485 455 aa12.16□□□□□ -0.46
SYCN-201ENST00000318438 ESAMQ96AP7 390 aa12.16□□□□□ -0.46
SYCN-201ENST00000318438 TBC1D20Q96BZ9 403 aa12.16□□□□□ -0.46
SYCN-201ENST00000318438 WDR34Q96EX3 536 aa12.16□□□□□ -0.46
SYCN-201ENST00000318438 PTCD3Q96EY7 689 aaKnown RBP12.16□□□□□ -0.46
SYCN-201ENST00000318438 CD244Q9BZW8 370 aa12.16□□□□□ -0.46
SYCN-201ENST00000318438 CLK4Q9HAZ1 481 aaKnown RBP12.16□□□□□ -0.46
SYCN-201ENST00000318438 ZNF180Q9UJW8 692 aa12.16□□□□□ -0.46
SYCN-201ENST00000318438 FBXW2Q9UKT8 454 aa12.16□□□□□ -0.46
SYCN-201ENST00000318438 NFU1Q9UMS0 254 aa12.16□□□□□ -0.46
SYCN-201ENST00000318438 IKBKGQ9Y6K9 419 aa12.16□□□□□ -0.46
SYCN-201ENST00000318438 A0A087WUV0 522 aaPredicted RBP12.15□□□□□ -0.46
SYCN-201ENST00000318438 EEF1E1-BLOC1S5C9J1V9 151 aa12.15□□□□□ -0.46
SYCN-201ENST00000318438 UBXN8O00124 270 aa12.15□□□□□ -0.46
SYCN-201ENST00000318438 EEF1E1O43324 174 aaKnown RBP12.15□□□□□ -0.46
SYCN-201ENST00000318438 CHST10O43529 356 aa12.15□□□□□ -0.46
SYCN-201ENST00000318438 CCNT2O60583 730 aaKnown RBP12.15□□□□□ -0.46
SYCN-201ENST00000318438 KLHL2O95198 593 aa12.15□□□□□ -0.46
SYCN-201ENST00000318438 FHP07954 510 aa12.15□□□□□ -0.46
SYCN-201ENST00000318438 ABHD2P08910 425 aa12.15□□□□□ -0.46
SYCN-201ENST00000318438 SMIM10L1P0DMW3 83 aa12.15□□□□□ -0.46
SYCN-201ENST00000318438 MTHFD2P13995 350 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms