RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 ARHGAP9Q9BRR9 750 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 DCUN1D5Q9BTE7 237 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 PRR14Q9BWN1 585 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 SUV39H2Q9H5I1 410 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 B4GALT6Q9UBX8 382 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 C3orf18Q9UK00 162 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 GPR55Q9Y2T6 319 aaPredicted RBP7.39□□□□□ -1.23
CNOT4-201ENST00000315544 HEATR5AQ86XA9 2040 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 NCF1BA6NI72 391 aaPredicted RBP7.39□□□□□ -1.23
CNOT4-201ENST00000315544 NCF1CA8MVU1 366 aaPredicted RBP7.39□□□□□ -1.23
CNOT4-201ENST00000315544 LEFTY2O00292 366 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 ANGPTL1O95841 491 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 CD1AP06126 327 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 ESRRGP62508 458 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 EEF1A1P68104 462 aaKnown RBP7.39□□□□□ -1.23
CNOT4-201ENST00000315544 MC1RQ01726 317 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 SYT14P1Q58G82 188 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 ZDHHC20Q5W0Z9 365 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 MTSS1LQ765P7 747 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 COMMD6Q7Z4G1 85 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 MILR1Q7Z6M3 343 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 ZER1Q7Z7L7 766 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 TMEM25Q86YD3 366 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 HORMAD2Q8N7B1 307 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 OR6P1Q8NGX9 317 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 SETD6Q8TBK2 473 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 SLC7A13Q8TCU3 470 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 RNF138Q8WVD3 245 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 MAGEB10Q96LZ2 347 aaPredicted RBP7.39□□□□□ -1.23
CNOT4-201ENST00000315544 PRRX2Q99811 253 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 BRD9Q9H8M2 597 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 ZFP64Q9NPA5 681 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 TRMT6Q9UJA5 497 aaKnown RBP7.39□□□□□ -1.23
CNOT4-201ENST00000315544 NINQ8N4C6 2090 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 FAM227AF5H4B4 570 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 NPIPB9F8W1W9 429 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 MAN2B1O00754 1011 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 BHLHE40O14503 412 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 ULK1O75385 1050 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 SLC4A1P02730 911 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 FABP3P05413 133 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 PSKH1P11801 424 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 S1PR1P21453 382 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 ETV5P41161 510 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 ETV1P50549 477 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 EFNA3P52797 238 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 ZNF45Q02386 682 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 NCF4Q15080 339 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 ATAD3BQ5T9A4 648 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 FNDC7Q5VTL7 733 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 TXNDC8Q6A555 127 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 BRAT1Q6PJG6 821 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 ZNF367Q7RTV3 350 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 WDR5BQ86VZ2 330 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 RBM45Q8IUH3 476 aaKnown RBP7.38□□□□□ -1.23
CNOT4-201ENST00000315544 LGI4Q8N135 537 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 TTC29Q8NA56 475 aaPredicted RBP7.38□□□□□ -1.23
CNOT4-201ENST00000315544 OR9Q2Q8NGE9 314 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 ORAI3Q9BRQ5 295 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 LRFN3Q9BTN0 628 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 POLDIP3Q9BY77 421 aaKnown RBP7.38□□□□□ -1.23
CNOT4-201ENST00000315544 VPS29Q9UBQ0 182 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 NCKAP5O14513 1909 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 TMEM129A0AVI4 362 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 WASHC1A8K0Z3 465 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 TBL1XO60907 577 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 ETFAP13804 333 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 PLA2G5P39877 138 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 CCR3P51677 355 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 MAP7Q14244 749 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 NEDD8Q15843 81 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 ZRANB3Q5FWF4 1079 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 PAQR6Q6TCH4 344 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 LCTLQ6UWM7 567 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 TMEM64Q6YI46 380 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 CLDN22Q8N7P3 220 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 TMEM105Q8N8V8 129 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 NLGN4YQ8NFZ3 816 aaPredicted RBP7.38□□□□□ -1.23
CNOT4-201ENST00000315544 MS4A3Q96HJ5 214 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 ATF6BQ99941 703 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 MARVELD1Q9BSK0 173 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 SLC6A16Q9GZN6 736 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 DPEP2Q9H4A9 486 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 ADAM29Q9UKF5 820 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 LRFN2Q9ULH4 789 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.38□□□□□ -1.23
CNOT4-201ENST00000315544 RBMX2Q9Y388 322 aaKnown RBP7.38□□□□□ -1.23
CNOT4-201ENST00000315544 N6AMT1Q9Y5N5 214 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 PRKYO43930 277 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 PTP4A3O75365 173 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 DIRAS1O95057 198 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 CHRM4P08173 479 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 CHRNB1P11230 501 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 TNFRSF1BP20333 461 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 TRHRP34981 398 aaPredicted RBP7.38□□□□□ -1.23
CNOT4-201ENST00000315544 LRRC74AQ0VAA2 488 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 EXOC3L2Q2M3D2 409 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 FAM78AQ5JUQ0 283 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 SLC35F1Q5T1Q4 408 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 EGFLAMQ63HQ2 1017 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms