RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 FAM109AQ8N4B1 249 aa18.47■□□□□ 0.55
USP48-201ENST00000308271 COQ8AQ8NI60 647 aa18.47■□□□□ 0.55
USP48-201ENST00000308271 BRI3BPQ8WY22 251 aa18.47■□□□□ 0.55
USP48-201ENST00000308271 CTRCQ99895 268 aa18.47■□□□□ 0.55
USP48-201ENST00000308271 RSPH9Q9H1X1 276 aaPredicted RBP18.47■□□□□ 0.55
USP48-201ENST00000308271 DDX60LQ5H9U9 1706 aaKnown RBP18.46■□□□□ 0.55
USP48-201ENST00000308271 DNAJC25-GNG10A0A024R161 153 aa18.46■□□□□ 0.55
USP48-201ENST00000308271 ZNF806P0C7X5 589 aa18.46■□□□□ 0.55
USP48-201ENST00000308271 CD9P21926 228 aa18.46■□□□□ 0.55
USP48-201ENST00000308271 FAM83FQ8NEG4 500 aaPredicted RBP18.46■□□□□ 0.55
USP48-201ENST00000308271 METTL2AQ96IZ6 378 aaKnown RBP18.46■□□□□ 0.55
USP48-201ENST00000308271 ZNF354BQ96LW1 612 aa18.46■□□□□ 0.55
USP48-201ENST00000308271 TUBB1Q9H4B7 451 aa18.46■□□□□ 0.55
USP48-201ENST00000308271 TEX13CA0A0J9YWL9 993 aa18.46■□□□□ 0.55
USP48-201ENST00000308271 A0A1B0GVI7 797 aa18.46■□□□□ 0.55
USP48-201ENST00000308271 MEIS3P2A8K0S8 358 aa18.46■□□□□ 0.55
USP48-201ENST00000308271 ANKRD28O15084 1053 aa18.46■□□□□ 0.55
USP48-201ENST00000308271 BMP1P13497 986 aa18.46■□□□□ 0.55
USP48-201ENST00000308271 HRASLS5Q96KN8 279 aa18.46■□□□□ 0.55
USP48-201ENST00000308271 CORINQ9Y5Q5 1042 aa18.46■□□□□ 0.55
USP48-201ENST00000308271 ITPKBP27987 946 aa18.46■□□□□ 0.55
USP48-201ENST00000308271 ZXDBP98169 803 aa18.46■□□□□ 0.55
USP48-201ENST00000308271 MEF2AQ02078 507 aaPredicted RBP18.46■□□□□ 0.55
USP48-201ENST00000308271 TMEM115Q12893 351 aaPredicted RBP18.46■□□□□ 0.55
USP48-201ENST00000308271 SLC35F1Q5T1Q4 408 aa18.46■□□□□ 0.55
USP48-201ENST00000308271 COMMD7Q86VX2 200 aa18.46■□□□□ 0.55
USP48-201ENST00000308271 ADAMTS19Q8TE59 1207 aa18.46■□□□□ 0.55
USP48-201ENST00000308271 FCAMRQ8WWV6 532 aa18.46■□□□□ 0.55
USP48-201ENST00000308271 MOAP1Q96BY2 351 aa18.46■□□□□ 0.55
USP48-201ENST00000308271 PDE4DIPQ5VU43 2346 aa18.46■□□□□ 0.55
USP48-201ENST00000308271 M0QZQ0 153 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 ALG11Q2TAA5 492 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 PROKR2Q8NFJ6 384 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 TMEM19Q96HH6 336 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 C11orf84Q9BUA3 381 aaPredicted RBP18.45■□□□□ 0.54
USP48-201ENST00000308271 SIAEQ9HAT2 523 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 LYARQ9NX58 379 aaKnown RBP18.45■□□□□ 0.54
USP48-201ENST00000308271 LRRC72A6NJI9 287 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 TATDN3Q17R31 274 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 SPATC1Q76KD6 591 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 DCUN1D3Q8IWE4 304 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 SDR16C5Q8N3Y7 309 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 LCN9Q8WX39 176 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 NT5DC2Q9H857 520 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 TRPV4Q9HBA0 871 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 MRTO4Q9UKD2 239 aaKnown RBP18.45■□□□□ 0.54
USP48-201ENST00000308271 DRGXA6NNA5 263 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 TSPAN6O43657 245 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 GPR37L1O60883 481 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 OAZ2O95190 189 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 LHCGRP22888 699 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 SLC22A10Q63ZE4 541 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 GRHL2Q6ISB3 625 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 TMEM17Q86X19 198 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 ZNF280BQ86YH2 543 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 SCAMP4Q969E2 229 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 TAF1P21675 1872 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 RNASET2O00584 256 aaKnown RBP18.45■□□□□ 0.54
USP48-201ENST00000308271 B3GALT2O43825 422 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 ARNTP27540 789 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 CMTM8Q8IZV2 173 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 TMEM175Q9BSA9 504 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 MTG2Q9H4K7 406 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 RANGRFQ9HD47 186 aaPredicted RBP18.45■□□□□ 0.54
USP48-201ENST00000308271 HSFX1Q9UBD0 423 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 RABL2AQ9UBK7 228 aaPredicted RBP18.45■□□□□ 0.54
USP48-201ENST00000308271 IL36AQ9UHA7 158 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 RABL2BQ9UNT1 228 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 WDR45Q9Y484 360 aa18.45■□□□□ 0.54
USP48-201ENST00000308271 LRRTM2O43300 516 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 SLC35A2P78381 396 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 PYHIN1Q6K0P9 492 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 CELF2-AS1Q8N7Q2 184 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 Q8N9G6 341 aaPredicted RBP18.44■□□□□ 0.54
USP48-201ENST00000308271 OR10H5Q8NGA6 315 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 OR8K5Q8NH50 307 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 SUN3Q8TAQ9 357 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 ZCCHC10Q8TBK6 192 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 SH3RF2Q8TEC5 729 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 EXO5Q9H790 373 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 MGAT4CQ9UBM8 478 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 ECM29Q5VYK3 1845 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 C2orf78A6NCI8 922 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 ANHXE9PGG2 379 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 M0R129 80 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 MAPK3P27361 379 aaPredicted RBP18.44■□□□□ 0.54
USP48-201ENST00000308271 GCGRP47871 477 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 OR12D2P58182 307 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 ACTC1P68032 377 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 ACTA1P68133 377 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 VLDLRP98155 873 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 MLLT11Q13015 90 aaPredicted RBP18.44■□□□□ 0.54
USP48-201ENST00000308271 MFSD6LQ8IWD5 586 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 NXPE2Q96DL1 559 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 TEX37Q96LM6 180 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 BRF2Q9HAW0 419 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 IL26Q9NPH9 171 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 PLCL2Q9UPR0 1127 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 ALG5Q9Y673 324 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 A0A075B6Q4 140 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms