RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 SUN3Q8TAQ9 357 aa6.57□□□□□ -1.36
PTCD2-201ENST00000308077 OR5P2Q8WZ92 322 aa6.57□□□□□ -1.36
PTCD2-201ENST00000308077 FAM120BQ96EK7 910 aaKnown RBP6.57□□□□□ -1.36
PTCD2-201ENST00000308077 SLC41A2Q96JW4 573 aa6.57□□□□□ -1.36
PTCD2-201ENST00000308077 AMDHD1Q96NU7 426 aa6.57□□□□□ -1.36
PTCD2-201ENST00000308077 DPH2Q9BQC3 489 aaPredicted RBP6.57□□□□□ -1.36
PTCD2-201ENST00000308077 SLC35A5Q9BS91 424 aa6.57□□□□□ -1.36
PTCD2-201ENST00000308077 MUC13Q9H3R2 512 aa6.57□□□□□ -1.36
PTCD2-201ENST00000308077 EPS8L2Q9H6S3 715 aa6.57□□□□□ -1.36
PTCD2-201ENST00000308077 RPF2Q9H7B2 306 aaKnown RBP6.57□□□□□ -1.36
PTCD2-201ENST00000308077 LYRM4Q9HD34 91 aa6.57□□□□□ -1.36
PTCD2-201ENST00000308077 ACSS1Q9NUB1 689 aaPredicted RBP6.57□□□□□ -1.36
PTCD2-201ENST00000308077 STX18Q9P2W9 335 aaKnown RBP6.57□□□□□ -1.36
PTCD2-201ENST00000308077 PHF11Q9UIL8 331 aa6.57□□□□□ -1.36
PTCD2-201ENST00000308077 PCDHGA5Q9Y5G8 931 aa6.57□□□□□ -1.36
PTCD2-201ENST00000308077 RALGAPA1Q6GYQ0 2036 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 COL27A1Q8IZC6 1860 aaPredicted RBP6.56□□□□□ -1.36
PTCD2-201ENST00000308077 A0A0A6YYC8 382 aaPredicted RBP6.56□□□□□ -1.36
PTCD2-201ENST00000308077 LNP1A1A4G5 178 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 ELOVL7A1L3X0 281 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 FITM1A5D6W6 292 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 EVPLLA8MZ36 301 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 MYO1GB0I1T2 1018 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 I3L1I5 382 aaPredicted RBP6.56□□□□□ -1.36
PTCD2-201ENST00000308077 CYR61O00622 381 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 KHNYNO15037 678 aaKnown RBP6.56□□□□□ -1.36
PTCD2-201ENST00000308077 GPR37O15354 613 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 NUDT7P0C024 238 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 CKMT1AP12532 417 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 ANPEPP15144 967 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 FOLR1P15328 257 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 ZNF10P21506 573 aaPredicted RBP6.56□□□□□ -1.36
PTCD2-201ENST00000308077 UQCRC2P22695 453 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 SOAT1P35610 550 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 FEN1P39748 380 aaKnown RBP6.56□□□□□ -1.36
PTCD2-201ENST00000308077 BUD31P41223 144 aaPredicted RBP6.56□□□□□ -1.36
PTCD2-201ENST00000308077 CASP9P55211 416 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 HSD11B2P80365 405 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 SIM1P81133 766 aaPredicted RBP6.56□□□□□ -1.36
PTCD2-201ENST00000308077 RHDQ02161 417 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 C16orf72Q14CZ0 275 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 MLC1Q15049 377 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 RGNQ15493 299 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 CEBPEQ15744 281 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 ADRM1Q16186 407 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 INAVAQ3KP66 663 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.56□□□□□ -1.36
PTCD2-201ENST00000308077 GLYATQ6IB77 296 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 TMEM71Q6P5X7 295 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 PRR23CQ6ZRP0 262 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 PTOV1Q86YD1 416 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 ZZZ3Q8IYH5 903 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 NATD1Q8N6N6 113 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 PSMA8Q8TAA3 256 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 IFI44Q8TCB0 444 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 SLCO4A1Q96BD0 722 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 ZBED6CLQ96FA7 236 aaPredicted RBP6.56□□□□□ -1.36
PTCD2-201ENST00000308077 REXO5Q96IC2 774 aaKnown RBP6.56□□□□□ -1.36
PTCD2-201ENST00000308077 ZNF681Q96N22 645 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 ZNF768Q9H5H4 540 aaKnown RBP6.56□□□□□ -1.36
PTCD2-201ENST00000308077 ANKHQ9HCJ1 492 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 PCDHGB4Q9UN71 923 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 AP3M1Q9Y2T2 418 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 TMEM184BQ9Y519 407 aaPredicted RBP6.56□□□□□ -1.36
PTCD2-201ENST00000308077 CREBBPQ92793 2442 aa6.56□□□□□ -1.36
PTCD2-201ENST00000308077 RNF103-CHMP3A0A140T963 221 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 HYKKA2RU49 373 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 AQP12BA6NM10 295 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 TMEM150CB9EJG8 249 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 FAM227AF5H4B4 570 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 TXNDC9O14530 226 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 KCNK5O95279 499 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 ETFAP13804 333 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 DDX5P17844 614 aaKnown RBP6.55□□□□□ -1.36
PTCD2-201ENST00000308077 NELFEP18615 380 aaKnown RBP6.55□□□□□ -1.36
PTCD2-201ENST00000308077 NTSP30990 170 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 GCGRP47871 477 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 NCBP2P52298 156 aaKnown RBP eCLIP6.55□□□□□ -1.36
PTCD2-201ENST00000308077 RAB38P57729 211 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 SESN3P58005 492 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 AP2B1P63010 937 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 TCTE1Q5JU00 501 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 PRAMEF17Q5VTA0 474 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 SAXO2Q658L1 398 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 CPZQ66K79 652 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 OR52E8Q6IFG1 317 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 DBX2Q6ZNG2 339 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 SERPINA11Q86U17 422 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 OR4N5Q8IXE1 308 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 AQP12AQ8IXF9 295 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 CCDC116Q8IYX3 515 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 TRIML2Q8N7C3 387 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 OR1L3Q8NH93 324 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 CANT1Q8WVQ1 401 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 FIG4Q92562 907 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 NAT6Q93015 286 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 DUS3LQ96G46 650 aaKnown RBP6.55□□□□□ -1.36
PTCD2-201ENST00000308077 RSRC1Q96IZ7 334 aaKnown RBP6.55□□□□□ -1.36
PTCD2-201ENST00000308077 LRGUKQ96M69 825 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 UBL7Q96S82 380 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms