RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 ZIC2O95409 532 aaPredicted RBP5.17□□□□□ -1.58
VPS50-202ENST00000305866 POP4O95707 220 aaKnown RBP5.17□□□□□ -1.58
VPS50-202ENST00000305866 IGHA1P01876 353 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 HMBSP08397 361 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 CISD3P0C7P0 127 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 ARAFP10398 606 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 HOXD10P28358 340 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 SERPINA4P29622 427 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 VIPR1P32241 457 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 CNR2P34972 360 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 PCBP4P57723 403 aaKnown RBP5.17□□□□□ -1.58
VPS50-202ENST00000305866 RHOAP61586 193 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 FABP5Q01469 135 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 PLAURQ03405 335 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 TLE2Q04725 743 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 RPS6KA2Q15349 733 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 FAM214AQ32MH5 1076 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 STPG1Q5TH74 334 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 PGBD2Q6P3X8 592 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 C22orf39Q6P5X5 142 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 SLCO4C1Q6ZQN7 724 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 IDO2Q6ZQW0 420 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 TRIM69Q86WT6 500 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 GPALPP1Q8IXQ4 340 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 YIPF7Q8N8F6 280 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 OR4K1Q8NGD4 311 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 OR8D4Q8NGM9 314 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 SETD7Q8WTS6 366 aaKnown RBP5.17□□□□□ -1.58
VPS50-202ENST00000305866 HGDQ93099 445 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 RMDN1Q96DB5 314 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 PDXPQ96GD0 296 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 SEPT5Q99719 369 aaPredicted RBP5.17□□□□□ -1.58
VPS50-202ENST00000305866 SUV39H2Q9H5I1 410 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 MVB12BQ9H7P6 319 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 AMBNQ9NP70 447 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 DNAJC11Q9NVH1 559 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 STUB1Q9UNE7 303 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 ALG5Q9Y673 324 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 TMEM131Q92545 1883 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 MAGEB17A8MXT2 336 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 KDM4EB2RXH2 506 aaPredicted RBP5.16□□□□□ -1.58
VPS50-202ENST00000305866 PRKYO43930 277 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 CYP7B1O75881 506 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 CLDN7O95471 211 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 CRYZL1O95825 349 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 GUSBP08236 651 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 NAT1P18440 290 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 PTBP1P26599 531 aaKnown RBP eCLIP5.16□□□□□ -1.586e-18■■■■■ 65.1
VPS50-202ENST00000305866 ACADLP28330 430 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 PRIM2P49643 509 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 SNRPD1P62314 119 aaKnown RBP5.16□□□□□ -1.58
VPS50-202ENST00000305866 SP3Q02447 781 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 LEXMQ3ZCV2 418 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 PRAMEF8Q5VWM4 474 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 PRAMEF7Q5VXH5 474 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 KIAA1211LQ6NV74 962 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 USP45Q70EL2 814 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 CREB3L2Q70SY1 520 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 GAREM2Q75VX8 874 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 SLC51BQ86UW2 128 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 MMP21Q8N119 569 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 GHDCQ8N2G8 530 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 SYT14Q8NB59 555 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 C9orf43Q8TAL5 461 aaPredicted RBP5.16□□□□□ -1.58
VPS50-202ENST00000305866 KISS1RQ969F8 398 aaPredicted RBP5.16□□□□□ -1.58
VPS50-202ENST00000305866 NACC2Q96BF6 587 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 PHOX2BQ99453 314 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 KCNS3Q9BQ31 491 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 ZSCAN5AQ9BUG6 496 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 ASPNQ9BXN1 380 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 ASB8Q9H765 288 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 SYNPO2LQ9H987 977 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 NMNAT1Q9HAN9 279 aaPredicted RBP5.16□□□□□ -1.58
VPS50-202ENST00000305866 ABCB9Q9NP78 766 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 ADAM29Q9UKF5 820 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 FZD4Q9ULV1 537 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 CFL2Q9Y281 166 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 SAMHD1Q9Y3Z3 626 aaKnown RBP5.16□□□□□ -1.58
VPS50-202ENST00000305866 PCDHB9Q9Y5E1 797 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 ABHD14A-ACY1A0A1B0GW23 586 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 NT5C1B-RDH14C9J2C7 533 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 E5RI56 91 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 E7EQ34 232 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 CHP2O43745 196 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 EFCAB14O75071 495 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 HOXD4P09016 255 aaPredicted RBP5.16□□□□□ -1.58
VPS50-202ENST00000305866 OR56A5P0C7T3 313 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 ETFAP13804 333 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 CTRB1P17538 263 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 LAG3P18627 525 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 RPL3P39023 403 aaKnown RBP5.16□□□□□ -1.58
VPS50-202ENST00000305866 RPIAP49247 311 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 EVX1P49640 407 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 GATMP50440 423 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 PER3P56645 1201 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 GNG2P59768 71 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 ZNF77Q15935 545 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 DUSP6Q16828 381 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 SYT14P1Q58G82 188 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 TOR2AQ5JU69 321 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms