RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 GIMAP4Q9NUV9 329 aa22.92■■□□□ 1.26
HOXC9-201ENST00000303450 EXO1Q9UQ84 846 aaKnown RBP22.92■■□□□ 1.26
HOXC9-201ENST00000303450 A0A0G2JND7 137 aa22.91■■□□□ 1.26
HOXC9-201ENST00000303450 OR10H2O60403 315 aa22.91■■□□□ 1.26
HOXC9-201ENST00000303450 HPP00738 406 aa22.91■■□□□ 1.26
HOXC9-201ENST00000303450 ALDOCP09972 364 aaKnown RBP22.91■■□□□ 1.26
HOXC9-201ENST00000303450 COX7A2P14406 83 aa22.91■■□□□ 1.26
HOXC9-201ENST00000303450 TNNI3P19429 210 aa22.91■■□□□ 1.26
HOXC9-201ENST00000303450 HPCAL1P37235 193 aa22.91■■□□□ 1.26
HOXC9-201ENST00000303450 STT3AP46977 705 aa22.91■■□□□ 1.26
HOXC9-201ENST00000303450 ELAVL1Q15717 326 aaKnown RBP22.91■■□□□ 1.26
HOXC9-201ENST00000303450 DCAF10Q5QP82 559 aa22.91■■□□□ 1.26
HOXC9-201ENST00000303450 C19orf48Q6RUI8 117 aa22.91■■□□□ 1.26
HOXC9-201ENST00000303450 R3HCC1LQ7Z5L2 792 aaKnown RBP22.91■■□□□ 1.26
HOXC9-201ENST00000303450 ST13P4Q8IZP2 240 aaPredicted RBP22.91■■□□□ 1.26
HOXC9-201ENST00000303450 PELOQ9BRX2 385 aaKnown RBP22.91■■□□□ 1.26
HOXC9-201ENST00000303450 CCDC28BQ9BUN5 200 aa22.91■■□□□ 1.26
HOXC9-201ENST00000303450 ZNF160Q9HCG1 818 aa22.91■■□□□ 1.26
HOXC9-201ENST00000303450 ENTPD4Q9Y227 616 aa22.91■■□□□ 1.26
HOXC9-201ENST00000303450 PCSK5Q92824 1860 aa22.91■■□□□ 1.26
HOXC9-201ENST00000303450 UBDO15205 165 aa22.9■■□□□ 1.26
HOXC9-201ENST00000303450 SLC35E2P0CK97 266 aa22.9■■□□□ 1.26
HOXC9-201ENST00000303450 CPMP14384 443 aa22.9■■□□□ 1.26
HOXC9-201ENST00000303450 PORP16435 677 aaPredicted RBP22.9■■□□□ 1.26
HOXC9-201ENST00000303450 LSP1P33241 339 aa22.9■■□□□ 1.26
HOXC9-201ENST00000303450 RPL3P39023 403 aaKnown RBP22.9■■□□□ 1.26
HOXC9-201ENST00000303450 FEN1P39748 380 aaKnown RBP22.9■■□□□ 1.26
HOXC9-201ENST00000303450 GNGT1P63211 74 aa22.9■■□□□ 1.26
HOXC9-201ENST00000303450 FAM180BQ6P0A1 224 aa22.9■■□□□ 1.26
HOXC9-201ENST00000303450 SAMD14Q8IZD0 417 aaPredicted RBP22.9■■□□□ 1.26
HOXC9-201ENST00000303450 CLEC1AQ8NC01 280 aa22.9■■□□□ 1.26
HOXC9-201ENST00000303450 CRELD1Q96HD1 420 aa22.9■■□□□ 1.26
HOXC9-201ENST00000303450 WDR77Q9BQA1 342 aaPredicted RBP22.9■■□□□ 1.26
HOXC9-201ENST00000303450 SLC35C2Q9NQQ7 365 aa22.9■■□□□ 1.26
HOXC9-201ENST00000303450 CLCA3PQ9Y6N3 262 aa22.9■■□□□ 1.26
HOXC9-201ENST00000303450 A0A1W2PS29 197 aa22.89■■□□□ 1.26
HOXC9-201ENST00000303450 PCSK2P16519 638 aa22.89■■□□□ 1.26
HOXC9-201ENST00000303450 CSNK2A2P19784 350 aaPredicted RBP22.89■■□□□ 1.26
HOXC9-201ENST00000303450 PRPS1L1P21108 318 aa22.89■■□□□ 1.26
HOXC9-201ENST00000303450 CLDN8P56748 225 aa22.89■■□□□ 1.26
HOXC9-201ENST00000303450 RPS6KA2Q15349 733 aa22.89■■□□□ 1.26
HOXC9-201ENST00000303450 ZNF750Q32MQ0 723 aa22.89■■□□□ 1.26
HOXC9-201ENST00000303450 TMEM198Q66K66 360 aa22.89■■□□□ 1.26
HOXC9-201ENST00000303450 PPWD1Q96BP3 646 aaKnown RBP22.89■■□□□ 1.26
HOXC9-201ENST00000303450 PPCDCQ96CD2 204 aa22.89■■□□□ 1.26
HOXC9-201ENST00000303450 MTERF3Q96E29 417 aa22.89■■□□□ 1.26
HOXC9-201ENST00000303450 CNRIP1Q96F85 164 aaPredicted RBP22.89■■□□□ 1.26
HOXC9-201ENST00000303450 RILPQ96NA2 401 aa22.89■■□□□ 1.26
HOXC9-201ENST00000303450 ING2Q9H160 280 aa22.89■■□□□ 1.26
HOXC9-201ENST00000303450 ATP13A2Q9NQ11 1180 aa22.89■■□□□ 1.26
HOXC9-201ENST00000303450 AIG1Q9NVV5 245 aa22.89■■□□□ 1.26
HOXC9-201ENST00000303450 TAS2R7Q9NYW3 318 aa22.89■■□□□ 1.26
HOXC9-201ENST00000303450 SH3BP4Q9P0V3 963 aa22.89■■□□□ 1.26
HOXC9-201ENST00000303450 G3BP2Q9UN86 482 aaKnown RBP22.89■■□□□ 1.26
HOXC9-201ENST00000303450 KCNMB2Q9Y691 235 aa22.89■■□□□ 1.26
HOXC9-201ENST00000303450 ZZEF1O43149 2961 aa22.89■■□□□ 1.25
HOXC9-201ENST00000303450 SAGE2PA6NJ88 616 aa22.88■■□□□ 1.25
HOXC9-201ENST00000303450 E9PBE3 544 aa22.88■■□□□ 1.25
HOXC9-201ENST00000303450 MASP2O00187 686 aa22.88■■□□□ 1.25
HOXC9-201ENST00000303450 KLHL41O60662 606 aa22.88■■□□□ 1.25
HOXC9-201ENST00000303450 IDO1P14902 403 aa22.88■■□□□ 1.25
HOXC9-201ENST00000303450 DDX5P17844 614 aaKnown RBP22.88■■□□□ 1.25
HOXC9-201ENST00000303450 TERF2Q15554 542 aa22.88■■□□□ 1.25
HOXC9-201ENST00000303450 ANKRD26P1Q6NSI1 321 aa22.88■■□□□ 1.25
HOXC9-201ENST00000303450 CGB2Q6NT52 195 aa22.88■■□□□ 1.25
HOXC9-201ENST00000303450 GPR155Q7Z3F1 870 aa22.88■■□□□ 1.25
HOXC9-201ENST00000303450 KRTCAP2Q8N6L1 136 aa22.88■■□□□ 1.25
HOXC9-201ENST00000303450 STON2Q8WXE9 905 aa22.88■■□□□ 1.25
HOXC9-201ENST00000303450 DAZLQ92904 295 aaKnown RBP22.88■■□□□ 1.25
HOXC9-201ENST00000303450 MARK4Q96L34 752 aa22.88■■□□□ 1.25
HOXC9-201ENST00000303450 IMMP1LQ96LU5 166 aa22.88■■□□□ 1.25
HOXC9-201ENST00000303450 DPY30Q9C005 99 aa22.88■■□□□ 1.25
HOXC9-201ENST00000303450 PRORYQ9H606 182 aa22.88■■□□□ 1.25
HOXC9-201ENST00000303450 KCNK13Q9HB14 408 aa22.88■■□□□ 1.25
HOXC9-201ENST00000303450 MAPRE3Q9UPY8 281 aa22.88■■□□□ 1.25
HOXC9-201ENST00000303450 USP24Q9UPU5 2620 aa22.88■■□□□ 1.25
HOXC9-201ENST00000303450 PKD1L2Q7Z442 2459 aa22.88■■□□□ 1.25
HOXC9-201ENST00000303450 GABRR3A8MPY1 467 aa22.87■■□□□ 1.25
HOXC9-201ENST00000303450 C17orf105B2RV13 164 aa22.87■■□□□ 1.25
HOXC9-201ENST00000303450 SCAMP2O15127 329 aaKnown RBP22.87■■□□□ 1.25
HOXC9-201ENST00000303450 DYRK3O43781 588 aa22.87■■□□□ 1.25
HOXC9-201ENST00000303450 ICAM2P13598 275 aa22.87■■□□□ 1.25
HOXC9-201ENST00000303450 SF3A3Q12874 501 aaKnown RBP eCLIP22.87■■□□□ 1.25
HOXC9-201ENST00000303450 CHAF1BQ13112 559 aa22.87■■□□□ 1.25
HOXC9-201ENST00000303450 PDE7AQ13946 482 aa22.87■■□□□ 1.25
HOXC9-201ENST00000303450 EXT1Q16394 746 aa22.87■■□□□ 1.25
HOXC9-201ENST00000303450 GSTA3Q16772 222 aa22.87■■□□□ 1.25
HOXC9-201ENST00000303450 CPZQ66K79 652 aa22.87■■□□□ 1.25
HOXC9-201ENST00000303450 LRRC25Q8N386 305 aaPredicted RBP22.87■■□□□ 1.25
HOXC9-201ENST00000303450 OR14A16Q8NHC5 309 aa22.87■■□□□ 1.25
HOXC9-201ENST00000303450 APOBEC4Q8WW27 367 aaKnown RBP22.87■■□□□ 1.25
HOXC9-201ENST00000303450 ZNF764Q96H86 408 aaPredicted RBP22.87■■□□□ 1.25
HOXC9-201ENST00000303450 ZNF681Q96N22 645 aa22.87■■□□□ 1.25
HOXC9-201ENST00000303450 BBS4Q96RK4 519 aa22.87■■□□□ 1.25
HOXC9-201ENST00000303450 PRPF18Q99633 342 aaKnown RBP22.87■■□□□ 1.25
HOXC9-201ENST00000303450 DSPP15924 2871 aaKnown RBP22.87■■□□□ 1.25
HOXC9-201ENST00000303450 MED13Q9UHV7 2174 aa22.87■■□□□ 1.25
HOXC9-201ENST00000303450 TBX19O60806 448 aa22.87■■□□□ 1.25
HOXC9-201ENST00000303450 SEC24CP53992 1094 aa22.87■■□□□ 1.25
HOXC9-201ENST00000303450 NME5P56597 212 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms