RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 POLR2JP52435 117 aaKnown RBP8.89□□□□□ -0.99
RFX3-201ENST00000302303 DNASE1L3Q13609 305 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 RPS6KA2Q15349 733 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 SPRED3Q2MJR0 410 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 PAGE3Q5JUK9 113 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 OR52E8Q6IFG1 317 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 LANCL3Q6ZV70 420 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 CLECL1Q8IZS7 167 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 GLB1L3Q8NCI6 653 aaPredicted RBP8.89□□□□□ -0.99
RFX3-201ENST00000302303 OR4K14Q8NGD5 310 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 OR2Y1Q8NGV0 311 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 ADAMTS17Q8TE56 1095 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 EXOSC8Q96B26 276 aaKnown RBP8.89□□□□□ -0.99
RFX3-201ENST00000302303 PPWD1Q96BP3 646 aaKnown RBP8.89□□□□□ -0.99
RFX3-201ENST00000302303 PPCDCQ96CD2 204 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 CTHRC1Q96CG8 243 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 PTCHD1Q96NR3 888 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 AMDHD1Q96NU7 426 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 FAIM2Q9BWQ8 316 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 ALOXE3Q9BYJ1 711 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 BHLHE41Q9C0J9 482 aaPredicted RBP8.89□□□□□ -0.99
RFX3-201ENST00000302303 GLIPR2Q9H4G4 154 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 SIRT3Q9NTG7 399 aaPredicted RBP8.89□□□□□ -0.99
RFX3-201ENST00000302303 ARL8BQ9NVJ2 186 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 C14orf105Q9NVL8 296 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 SH3BP4Q9P0V3 963 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 SLAMF8Q9P0V8 285 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 MMACHCQ9Y4U1 282 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 LOC102723996A0A087X1L8 192 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 A0A1W2PQ72 361 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 BLACEA4D250 179 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 C21orf140B9A014 251 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 HRKO00198 91 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 SOCS6O14544 535 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 SLC22A2O15244 555 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 ERAL1O75616 437 aaKnown RBP8.88□□□□□ -0.99
RFX3-201ENST00000302303 CLPSP04118 112 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 ATP1B1P05026 303 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 CT62P0C5K7 136 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 CPMP14384 443 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 COX7A2P14406 83 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 LIFP15018 202 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 TLX1P31314 330 aaPredicted RBP8.88□□□□□ -0.99
RFX3-201ENST00000302303 DLSTP36957 453 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 CDKN2CP42773 168 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 GPR143P51810 404 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 EMP2P54851 167 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 OCA2Q04671 838 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 SRSF11Q05519 484 aaKnown RBP8.88□□□□□ -0.99
RFX3-201ENST00000302303 ACTN3Q08043 901 aaPredicted RBP8.88□□□□□ -0.99
RFX3-201ENST00000302303 IL10RAQ13651 578 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 MLC1Q15049 377 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 LTB4RQ15722 352 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 PRICKLE4Q2TBC4 344 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 PGS1Q32NB8 556 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 VPS26BQ4G0F5 336 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 CPTPQ5TA50 214 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 ZNF551Q7Z340 670 aaPredicted RBP8.88□□□□□ -0.99
RFX3-201ENST00000302303 ANKRD37Q7Z713 158 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 CCDC116Q8IYX3 515 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 FAM9CQ8IZT9 166 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 NFAM1Q8NET5 270 aaPredicted RBP8.88□□□□□ -0.99
RFX3-201ENST00000302303 PSMA8Q8TAA3 256 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 DOK4Q8TEW6 326 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 PTPMT1Q8WUK0 201 aaPredicted RBP8.88□□□□□ -0.99
RFX3-201ENST00000302303 GTF2H4Q92759 462 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 FGF11Q92914 225 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 SPDL1Q96EA4 605 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 LRRC37BQ96QE4 947 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 INPP5KQ9BT40 448 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 DUSP26Q9BV47 211 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 GPR87Q9BY21 358 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 FAM117AQ9C073 453 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 MIEF1Q9NQG6 463 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 ZNF639Q9UID6 485 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 C3orf18Q9UK00 162 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 PTRH2Q9Y3E5 179 aaKnown RBP8.88□□□□□ -0.99
RFX3-201ENST00000302303 HS3ST3B1Q9Y662 390 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 LAMA5O15230 3695 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 NCOR2Q9Y618 2525 aa8.88□□□□□ -0.99
RFX3-201ENST00000302303 CEP295Q9C0D2 2601 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 TRBV5-3A0A0A0MS03 114 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 IGHV3-20A0A0C4DH32 117 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 LOC100653049A0A140TA62 436 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 PRSS51A0A1B0GVH4 220 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 A0A1W2PP18 115 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 C9J4A7 227 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 TAF4O00268 1085 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 RNASET2O00584 256 aaKnown RBP8.87□□□□□ -0.99
RFX3-201ENST00000302303 CLDN4O14493 209 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 ALOX12BO75342 701 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 DCTN3O75935 186 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 KRT34O76011 436 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 IL6P05231 212 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 CYC1P08574 325 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 SNRPB2P08579 225 aaKnown RBP8.87□□□□□ -0.99
RFX3-201ENST00000302303 SLC35E2P0CK97 266 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 PORP16435 677 aaPredicted RBP8.87□□□□□ -0.99
RFX3-201ENST00000302303 HPCAL1P37235 193 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 KIR3DL1P43629 444 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms