RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 LCKP06239 509 aa20.83■□□□□ 0.92
TPM4-201ENST00000300933 HOXB2P14652 356 aa20.83■□□□□ 0.92
TPM4-201ENST00000300933 CD36P16671 472 aa20.83■□□□□ 0.92
TPM4-201ENST00000300933 NTSR1P30989 418 aa20.83■□□□□ 0.92
TPM4-201ENST00000300933 MANFP55145 182 aaKnown RBP20.83■□□□□ 0.92
TPM4-201ENST00000300933 DESI1Q6ICB0 168 aa20.83■□□□□ 0.92
TPM4-201ENST00000300933 LINC00299Q6ZSB3 139 aa20.83■□□□□ 0.92
TPM4-201ENST00000300933 OLIG3Q7RTU3 272 aa20.83■□□□□ 0.92
TPM4-201ENST00000300933 DGLUCYQ7Z3D6 616 aa20.83■□□□□ 0.92
TPM4-201ENST00000300933 UBE3DQ7Z6J8 389 aa20.83■□□□□ 0.92
TPM4-201ENST00000300933 TMEM145Q8NBT3 493 aa20.83■□□□□ 0.92
TPM4-201ENST00000300933 OR2A1Q8NGT9 310 aa20.83■□□□□ 0.92
TPM4-201ENST00000300933 DOHHQ9BU89 302 aa20.83■□□□□ 0.92
TPM4-201ENST00000300933 RHCGQ9UBD6 479 aa20.83■□□□□ 0.92
TPM4-201ENST00000300933 PCDHGB1Q9Y5G3 927 aa20.83■□□□□ 0.92
TPM4-201ENST00000300933 TICRRQ7Z2Z1 1910 aa20.83■□□□□ 0.92
TPM4-201ENST00000300933 EFCAB9A8MZ26 197 aa20.82■□□□□ 0.92
TPM4-201ENST00000300933 NARSO43776 548 aaKnown RBP20.82■□□□□ 0.92
TPM4-201ENST00000300933 PCSK2P16519 638 aa20.82■□□□□ 0.92
TPM4-201ENST00000300933 RYKP34925 604 aa20.82■□□□□ 0.92
TPM4-201ENST00000300933 PCGF2P35227 344 aa20.82■□□□□ 0.92
TPM4-201ENST00000300933 SLC35A2P78381 396 aa20.82■□□□□ 0.92
TPM4-201ENST00000300933 NDUFA5Q16718 116 aa20.82■□□□□ 0.92
TPM4-201ENST00000300933 HMGN2P46Q86SG4 172 aa20.82■□□□□ 0.92
TPM4-201ENST00000300933 CCDC103Q8IW40 242 aa20.82■□□□□ 0.92
TPM4-201ENST00000300933 PGBD3Q8N328 593 aa20.82■□□□□ 0.92
TPM4-201ENST00000300933 FRMD1Q8N878 549 aa20.82■□□□□ 0.92
TPM4-201ENST00000300933 OR52N2Q8NGI0 321 aa20.82■□□□□ 0.92
TPM4-201ENST00000300933 OR52E1Q8NGJ3 308 aa20.82■□□□□ 0.92
TPM4-201ENST00000300933 CDCA3Q99618 268 aaPredicted RBP20.82■□□□□ 0.92
TPM4-201ENST00000300933 NEK6Q9HC98 313 aa20.82■□□□□ 0.92
TPM4-201ENST00000300933 CLDND1Q9NY35 253 aa20.82■□□□□ 0.92
TPM4-201ENST00000300933 NDUFAF4Q9P032 175 aa20.82■□□□□ 0.92
TPM4-201ENST00000300933 CAB39Q9Y376 341 aaPredicted RBP20.82■□□□□ 0.92
TPM4-201ENST00000300933 ACVR2AP27037 513 aa20.82■□□□□ 0.92
TPM4-201ENST00000300933 GRK3P35626 688 aa20.82■□□□□ 0.92
TPM4-201ENST00000300933 DGKEP52429 567 aa20.82■□□□□ 0.92
TPM4-201ENST00000300933 SELENOWP63302 87 aa20.82■□□□□ 0.92
TPM4-201ENST00000300933 CDK6Q00534 326 aa20.82■□□□□ 0.92
TPM4-201ENST00000300933 CDC20Q12834 499 aa20.82■□□□□ 0.92
TPM4-201ENST00000300933 TPRG1LQ5T0D9 272 aa20.82■□□□□ 0.92
TPM4-201ENST00000300933 FBXL6Q8N531 539 aa20.82■□□□□ 0.92
TPM4-201ENST00000300933 GOT1L1Q8NHS2 421 aaPredicted RBP20.82■□□□□ 0.92
TPM4-201ENST00000300933 FCRL4Q96PJ5 515 aa20.82■□□□□ 0.92
TPM4-201ENST00000300933 TEFMQ96QE5 360 aaKnown RBP20.82■□□□□ 0.92
TPM4-201ENST00000300933 APOOQ9BUR5 198 aa20.82■□□□□ 0.92
TPM4-201ENST00000300933 SP140LQ9H930 580 aa20.82■□□□□ 0.92
TPM4-201ENST00000300933 RLIMQ9NVW2 624 aa20.82■□□□□ 0.92
TPM4-201ENST00000300933 ACSL5Q9ULC5 683 aa20.82■□□□□ 0.92
TPM4-201ENST00000300933 TPRKBQ9Y3C4 175 aa20.82■□□□□ 0.92
TPM4-201ENST00000300933 ANKRD34BA5PLL1 514 aa20.81■□□□□ 0.92
TPM4-201ENST00000300933 FPR1P21462 350 aa20.81■□□□□ 0.92
TPM4-201ENST00000300933 CLK1P49759 484 aaKnown RBP20.81■□□□□ 0.92
TPM4-201ENST00000300933 KDM4DQ6B0I6 523 aa20.81■□□□□ 0.92
TPM4-201ENST00000300933 CXorf40BQ96DE9 158 aa20.81■□□□□ 0.92
TPM4-201ENST00000300933 S1PR5Q9H228 398 aa20.81■□□□□ 0.92
TPM4-201ENST00000300933 DCSTAMPQ9H295 470 aa20.81■□□□□ 0.92
TPM4-201ENST00000300933 KRT84Q9NSB2 600 aa20.81■□□□□ 0.92
TPM4-201ENST00000300933 SCN3BQ9NY72 215 aa20.81■□□□□ 0.92
TPM4-201ENST00000300933 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.81■□□□□ 0.92
TPM4-201ENST00000300933 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.81■□□□□ 0.92
TPM4-201ENST00000300933 C4orf51C9J302 202 aa20.81■□□□□ 0.92
TPM4-201ENST00000300933 SH3BP5O60239 455 aa20.81■□□□□ 0.92
TPM4-201ENST00000300933 B4GALT2O60909 372 aa20.81■□□□□ 0.92
TPM4-201ENST00000300933 POU2F1P14859 743 aa20.81■□□□□ 0.92
TPM4-201ENST00000300933 CD72P21854 359 aa20.81■□□□□ 0.92
TPM4-201ENST00000300933 PPIBP23284 216 aaKnown RBP20.81■□□□□ 0.92
TPM4-201ENST00000300933 GANABQ14697 944 aaKnown RBP20.81■□□□□ 0.92
TPM4-201ENST00000300933 ARHGAP19Q14CB8 494 aa20.81■□□□□ 0.92
TPM4-201ENST00000300933 ZNF750Q32MQ0 723 aa20.81■□□□□ 0.92
TPM4-201ENST00000300933 SYT6Q5T7P8 510 aaPredicted RBP20.81■□□□□ 0.92
TPM4-201ENST00000300933 SPATC1Q76KD6 591 aa20.81■□□□□ 0.92
TPM4-201ENST00000300933 TTC29Q8NA56 475 aaPredicted RBP20.81■□□□□ 0.92
TPM4-201ENST00000300933 PDXPQ96GD0 296 aa20.81■□□□□ 0.92
TPM4-201ENST00000300933 RHBGQ9H310 441 aa20.81■□□□□ 0.92
TPM4-201ENST00000300933 ACOT13Q9NPJ3 140 aa20.81■□□□□ 0.92
TPM4-201ENST00000300933 WASH6PQ9NQA3 447 aa20.81■□□□□ 0.92
TPM4-201ENST00000300933 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.81■□□□□ 0.926e-14■□□□□ 10.6
TPM4-201ENST00000300933 SLC16A6O15403 523 aa20.81■□□□□ 0.92
TPM4-201ENST00000300933 PRAMEF10O60809 474 aa20.81■□□□□ 0.92
TPM4-201ENST00000300933 DDCP20711 480 aa20.81■□□□□ 0.92
TPM4-201ENST00000300933 RSBN1Q5VWQ0 802 aaPredicted RBP20.81■□□□□ 0.92
TPM4-201ENST00000300933 GPR153Q6NV75 609 aa20.81■□□□□ 0.92
TPM4-201ENST00000300933 CEACAM20Q6UY09 585 aa20.81■□□□□ 0.92
TPM4-201ENST00000300933 SVOPQ8N4V2 548 aa20.81■□□□□ 0.92
TPM4-201ENST00000300933 TSACCQ96A04 125 aaPredicted RBP20.81■□□□□ 0.92
TPM4-201ENST00000300933 KCNC2Q96PR1 638 aa20.81■□□□□ 0.92
TPM4-201ENST00000300933 LMAN2LQ9H0V9 348 aa20.81■□□□□ 0.92
TPM4-201ENST00000300933 AHSPQ9NZD4 102 aa20.81■□□□□ 0.92
TPM4-201ENST00000300933 CORO2BQ9UQ03 480 aa20.81■□□□□ 0.92
TPM4-201ENST00000300933 MDC1Q14676 2089 aaKnown RBP20.8■□□□□ 0.92
TPM4-201ENST00000300933 NDUFS4O43181 175 aa20.8■□□□□ 0.92
TPM4-201ENST00000300933 PLRG1O43660 514 aaKnown RBP20.8■□□□□ 0.92
TPM4-201ENST00000300933 FAM20BO75063 409 aa20.8■□□□□ 0.92
TPM4-201ENST00000300933 NME6O75414 186 aaPredicted RBP20.8■□□□□ 0.92
TPM4-201ENST00000300933 DBTP11182 482 aaKnown RBP20.8■□□□□ 0.92
TPM4-201ENST00000300933 RAB28P51157 221 aa20.8■□□□□ 0.92
TPM4-201ENST00000300933 CDH12P55289 794 aa20.8■□□□□ 0.92
TPM4-201ENST00000300933 REEP5Q00765 189 aa20.8■□□□□ 0.92
TPM4-201ENST00000300933 PRDX1Q06830 199 aaKnown RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms