RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 HOXC13P31276 330 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 LEPRP48357 1165 aaKnown RBP6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 BNIP3Q12983 259 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 COL9A2Q14055 689 aaPredicted RBP6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 TRIM61Q5EBN2 209 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 DPPA4Q7L190 304 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 LRRTM3Q86VH5 581 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 AQP12AQ8IXF9 295 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 C9orf43Q8TAL5 461 aaPredicted RBP6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 THAP4Q8WY91 577 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 PPP1R14BQ96C90 147 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 KCTD7Q96MP8 289 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 ZNF559Q9BR84 538 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 ALOXE3Q9BYJ1 711 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 PDLIM7Q9NR12 457 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 MALT1Q9UDY8 824 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 MGAT4BQ9UQ53 548 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 RPH3AQ9Y2J0 694 aaPredicted RBP6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 PEX16Q9Y5Y5 336 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 NSG1A0A0A6YYJ2 146 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 FABP12A6NFH5 140 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 E7ENX8 843 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 TLX2O43763 284 aaPredicted RBP6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 SOX14O95416 240 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 ZNF806P0C7X5 589 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 CD1DP15813 335 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 GSTT1P30711 240 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 TAS2R43P59537 309 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 DNAJB13P59910 316 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 DOC2AQ14183 400 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 ASB18Q6ZVZ8 466 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 IQCKQ8N0W5 287 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 C15orf40Q8WUR7 153 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 HS6ST2Q96MM7 605 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 PCDHAC1Q9H158 963 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 GAREM1Q9H706 876 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 ANKRA2Q9H9E1 313 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 ATXN7L1Q9ULK2 861 aaPredicted RBP6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 ADAMTS5Q9UNA0 930 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 ZNF99A8MXY4 864 aaPredicted RBP6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 C17orf105B2RV13 164 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 TMEM189-UBE2V1I3L0A0 370 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 FESP07332 822 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 PRKCAP17252 672 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 POU3F2P20265 443 aaPredicted RBP6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 TNFSF4P23510 183 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 GJA4P35212 333 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 ZNF33BQ06732 778 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 DAG1Q14118 895 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 CDK10Q15131 360 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 SHHQ15465 462 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 C4orf46Q504U0 113 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 PKDCCQ504Y2 493 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 SHISA6Q6ZSJ9 500 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 MSANTD1Q6ZTZ1 278 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 FRMD7Q6ZUT3 714 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 CARM1Q86X55 608 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 SLITRK4Q8IW52 837 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.62□□□□□ -1.353e-7■■■■■ 243.7
GAPVD1-202ENST00000297933 CREB3L4Q8TEY5 395 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 TCEAL3Q969E4 200 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 SGTBQ96EQ0 304 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 PITX2Q99697 317 aa6.62□□□□□ -1.35
GAPVD1-202ENST00000297933 LOC102723532A0A0G2JNH3 316 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 SLC9B1P1A6NJY1 282 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 H3BML4 177 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 SLC33A1O00400 549 aaPredicted RBP6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 CCRL2O00421 344 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 ZNF888P0CJ79 500 aaPredicted RBP6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 ZNF43P17038 809 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 MAGP20916 626 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 MLLT10P55197 1068 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 SLC7A9P82251 487 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 DSG2Q14126 1118 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 EFR3AQ14156 821 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 SEC23BQ15437 767 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 RPL13AP3Q6NVV1 102 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 TMEM53Q6P2H8 277 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 PNCKQ6P2M8 343 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 PGM2L1Q6PCE3 622 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 RAB11FIP2Q7L804 512 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 TMEM139Q8IV31 216 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 LAS2Q8IYD9 372 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 CNEP1R1Q8N9A8 125 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 AGBL5Q8NDL9 886 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 SHKBP1Q8TBC3 707 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 ELP5Q8TE02 316 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 MYLIPQ8WY64 445 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 MSLNLQ96KJ4 702 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 TTTY10Q9BZA0 68 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 COQ10BQ9H8M1 238 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 STARD5Q9NSY2 213 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 TEX13DA0A0J9YY54 714 aaPredicted RBP6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 A0A1B0GTW7 788 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 AQP9O43315 295 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 H6PDO95479 791 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 CD79AP11912 226 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 BMP4P12644 408 aa6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 AZGP1P25311 298 aaKnown RBP6.61□□□□□ -1.35
GAPVD1-202ENST00000297933 HMGCLP35914 325 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms