RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 BADQ92934 168 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 GTPBP3Q969Y2 492 aaKnown RBP9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 TMEM80Q96HE8 168 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 CAMK1GQ96NX5 476 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 MGLLQ99685 303 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 TIMM29Q9BSF4 260 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 FUZQ9BT04 418 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 CDADC1Q9BWV3 514 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 RMI1Q9H9A7 625 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 SEMA3GQ9NS98 782 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 REV1Q9UBZ9 1251 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 DOLKQ9UPQ8 538 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 GPC6Q9Y625 555 aaPredicted RBP9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 TCF20Q9UGU0 1960 aaKnown RBP9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 CEP350Q5VT06 3117 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 ATG2AQ2TAZ0 1938 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 SNTNA6NMZ2 147 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 PRRT4C9JH25 899 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 HMGN4O00479 90 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 COQ9O75208 318 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 UGT2B17O75795 530 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 GASTP01350 101 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 CNR2P34972 360 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 TIE1P35590 1138 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 CCT3P49368 545 aaKnown RBP9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 NTHL1P78549 312 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 ABATP80404 500 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 CDK3Q00526 305 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 IFITM3Q01628 133 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 C1DQ13901 141 aaKnown RBP9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 ZNF234Q14588 700 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 PRSS53Q2L4Q9 553 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 TCEAL5Q5H9L2 206 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 C1QTNF12Q5T7M4 302 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 HEATR4Q86WZ0 1026 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 LYSMD2Q8IV50 215 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 ZNF366Q8N895 744 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 EFHD2Q96C19 240 aaPredicted RBP9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 SLC35G5Q96KT7 338 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 TEX101Q9BY14 249 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 ALOXE3Q9BYJ1 711 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 SIRT3Q9NTG7 399 aaPredicted RBP9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 CXXC1Q9P0U4 656 aaPredicted RBP9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 ANKMY1Q9P2S6 941 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 SEC14L3Q9UDX4 400 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 TRAPPC4Q9Y296 219 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 WDR37Q9Y2I8 494 aa9.5□□□□□ -0.89
TNFRSF11B-201ENST00000297350 A0A0A6YYD5 115 aa9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 J3KTA2 159 aa9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 HAT1O14929 419 aa9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 AQP9O43315 295 aa9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 ACADMP11310 421 aa9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 CD72P21854 359 aa9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 P2RY2P41231 377 aa9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 GSSP48637 474 aa9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 XKP51811 444 aa9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 LBX1P52954 281 aa9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 NUDT6P53370 316 aa9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 CRISP3P54108 245 aa9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 LIM2P55344 173 aa9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 DUSP7Q16829 419 aa9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 GAB4Q2WGN9 574 aa9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 MFSD4BQ5TF39 518 aa9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 KIAA1161Q6NSJ0 714 aa9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 TCTN3Q6NUS6 607 aa9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 FAM26EQ8N5C1 309 aa9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 ANKRD53Q8N9V6 530 aa9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 SRFBP1Q8NEF9 429 aaKnown RBP9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 ST13P5Q8NFI4 369 aaPredicted RBP9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 PROKR2Q8NFJ6 384 aa9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 GPR32P1Q8NGA4 272 aa9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 SETD6Q8TBK2 473 aa9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 SMARCD2Q92925 531 aa9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 F2RL3Q96RI0 385 aa9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 MENTQ9BUN1 341 aa9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 POLDIP3Q9BY77 421 aaKnown RBP9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 PRRG3Q9BZD7 231 aa9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 C6orf62Q9GZU0 229 aaPredicted RBP9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 POLR2J3Q9H1A7 115 aaKnown RBP9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 TRPV4Q9HBA0 871 aa9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 SLAMF7Q9NQ25 335 aa9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 SCHIP1Q9P0W5 487 aaPredicted RBP9.49□□□□□ -0.89
TNFRSF11B-201ENST00000297350 TRBV4-1A0A0J9YWV2 114 aa9.48□□□□□ -0.89
TNFRSF11B-201ENST00000297350 SYT5O00445 386 aa9.48□□□□□ -0.89
TNFRSF11B-201ENST00000297350 FFAR1O14842 300 aa9.48□□□□□ -0.89
TNFRSF11B-201ENST00000297350 DSCR3O14972 297 aa9.48□□□□□ -0.89
TNFRSF11B-201ENST00000297350 SLC28A2O43868 658 aa9.48□□□□□ -0.89
TNFRSF11B-201ENST00000297350 TBX6O95947 436 aaPredicted RBP9.48□□□□□ -0.89
TNFRSF11B-201ENST00000297350 DBTP11182 482 aaKnown RBP9.48□□□□□ -0.89
TNFRSF11B-201ENST00000297350 IFNGR2P38484 337 aa9.48□□□□□ -0.89
TNFRSF11B-201ENST00000297350 GANABQ14697 944 aaKnown RBP9.48□□□□□ -0.89
TNFRSF11B-201ENST00000297350 TMEM44Q2T9K0 475 aa9.48□□□□□ -0.89
TNFRSF11B-201ENST00000297350 OR4C11Q6IEV9 310 aa9.48□□□□□ -0.89
TNFRSF11B-201ENST00000297350 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.48□□□□□ -0.89
TNFRSF11B-201ENST00000297350 PRR23CQ6ZRP0 262 aa9.48□□□□□ -0.89
TNFRSF11B-201ENST00000297350 SLC22A16Q86VW1 577 aa9.48□□□□□ -0.89
TNFRSF11B-201ENST00000297350 ATCAYQ86WG3 371 aa9.48□□□□□ -0.89
TNFRSF11B-201ENST00000297350 OR56A1Q8NGH5 318 aa9.48□□□□□ -0.89
TNFRSF11B-201ENST00000297350 WDR36Q8NI36 951 aaKnown RBP9.48□□□□□ -0.89
TNFRSF11B-201ENST00000297350 SUN3Q8TAQ9 357 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms