RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 NLNQ9BYT8 704 aa20.19■□□□□ 0.82
SOX17-201ENST00000297316 ADPRHL2Q9NX46 363 aa20.19■□□□□ 0.82
SOX17-201ENST00000297316 MRPS2Q9Y399 296 aaKnown RBP20.19■□□□□ 0.82
SOX17-201ENST00000297316 ENTPD2Q9Y5L3 495 aa20.19■□□□□ 0.82
SOX17-201ENST00000297316 CCDC160A6NGH7 325 aa20.18■□□□□ 0.82
SOX17-201ENST00000297316 TRIM64A6NGJ6 449 aa20.18■□□□□ 0.82
SOX17-201ENST00000297316 KRT75O95678 551 aa20.18■□□□□ 0.82
SOX17-201ENST00000297316 CTSBP07858 339 aa20.18■□□□□ 0.82
SOX17-201ENST00000297316 ARAFP10398 606 aa20.18■□□□□ 0.82
SOX17-201ENST00000297316 ELK4P28324 431 aa20.18■□□□□ 0.82
SOX17-201ENST00000297316 STXBP1P61764 594 aaKnown RBP20.18■□□□□ 0.82
SOX17-201ENST00000297316 OOSP2Q86WS3 158 aa20.18■□□□□ 0.82
SOX17-201ENST00000297316 GKN2Q86XP6 184 aa20.18■□□□□ 0.82
SOX17-201ENST00000297316 ARL10Q8N8L6 244 aa20.18■□□□□ 0.82
SOX17-201ENST00000297316 BAHD1Q8TBE0 780 aaPredicted RBP20.18■□□□□ 0.82
SOX17-201ENST00000297316 UTP15Q8TED0 518 aaKnown RBP20.18■□□□□ 0.82
SOX17-201ENST00000297316 TMIGD2Q96BF3 282 aa20.18■□□□□ 0.82
SOX17-201ENST00000297316 MAPKAP1Q9BPZ7 522 aa20.18■□□□□ 0.82
SOX17-201ENST00000297316 TMEM74BQ9NUR3 256 aa20.18■□□□□ 0.82
SOX17-201ENST00000297316 PTTG2Q9NZH5 202 aa20.18■□□□□ 0.82
SOX17-201ENST00000297316 PI4KAP42356 2102 aa20.18■□□□□ 0.82
SOX17-201ENST00000297316 A0A0J9YY10 115 aa20.18■□□□□ 0.82
SOX17-201ENST00000297316 FAM221BA6H8Z2 402 aa20.18■□□□□ 0.82
SOX17-201ENST00000297316 AQP9O43315 295 aa20.18■□□□□ 0.82
SOX17-201ENST00000297316 ITGA1P56199 1179 aa20.18■□□□□ 0.82
SOX17-201ENST00000297316 SELENOWP63302 87 aa20.18■□□□□ 0.82
SOX17-201ENST00000297316 RBBP4Q09028 425 aa20.18■□□□□ 0.82
SOX17-201ENST00000297316 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.18■□□□□ 0.82
SOX17-201ENST00000297316 TNFAIP8L2Q6P589 184 aaPredicted RBP20.18■□□□□ 0.82
SOX17-201ENST00000297316 PIWIL3Q7Z3Z3 882 aaKnown RBP20.18■□□□□ 0.82
SOX17-201ENST00000297316 ZFP28Q8NHY6 868 aa20.18■□□□□ 0.82
SOX17-201ENST00000297316 DNASE2BQ8WZ79 361 aa20.18■□□□□ 0.82
SOX17-201ENST00000297316 NEURL3Q96EH8 262 aa20.18■□□□□ 0.82
SOX17-201ENST00000297316 RDH12Q96NR8 316 aa20.18■□□□□ 0.82
SOX17-201ENST00000297316 RBM38Q9H0Z9 239 aaKnown RBP20.18■□□□□ 0.82
SOX17-201ENST00000297316 IL21RQ9HBE5 538 aa20.18■□□□□ 0.82
SOX17-201ENST00000297316 FAM60AQ9NP50 221 aa20.18■□□□□ 0.82
SOX17-201ENST00000297316 ASXL3Q9C0F0 2248 aa20.17■□□□□ 0.82
SOX17-201ENST00000297316 H0YGG7 62 aa20.17■□□□□ 0.82
SOX17-201ENST00000297316 M0QX08 132 aa20.17■□□□□ 0.82
SOX17-201ENST00000297316 AIFM1O95831 613 aa20.17■□□□□ 0.82
SOX17-201ENST00000297316 SLC35G6P0C7Q6 338 aa20.17■□□□□ 0.82
SOX17-201ENST00000297316 ST6GAL1P15907 406 aa20.17■□□□□ 0.82
SOX17-201ENST00000297316 DAPP51397 102 aa20.17■□□□□ 0.82
SOX17-201ENST00000297316 NR1H2P55055 460 aa20.17■□□□□ 0.82
SOX17-201ENST00000297316 DSTNP60981 165 aa20.17■□□□□ 0.82
SOX17-201ENST00000297316 ARF3P61204 181 aaPredicted RBP20.17■□□□□ 0.82
SOX17-201ENST00000297316 RGS1Q08116 209 aa20.17■□□□□ 0.82
SOX17-201ENST00000297316 DEFB110Q30KQ9 67 aa20.17■□□□□ 0.82
SOX17-201ENST00000297316 GALNT5Q7Z7M9 940 aa20.17■□□□□ 0.82
SOX17-201ENST00000297316 ZFYVE21Q9BQ24 234 aa20.17■□□□□ 0.82
SOX17-201ENST00000297316 GABARAPL1Q9H0R8 117 aa20.17■□□□□ 0.82
SOX17-201ENST00000297316 STARD5Q9NSY2 213 aa20.17■□□□□ 0.82
SOX17-201ENST00000297316 IFT80Q9P2H3 777 aaPredicted RBP20.17■□□□□ 0.82
SOX17-201ENST00000297316 FRYLO94915 3013 aa20.17■□□□□ 0.82
SOX17-201ENST00000297316 CCDC88CQ9P219 2028 aa20.16■□□□□ 0.82
SOX17-201ENST00000297316 BCAT2O15382 392 aaPredicted RBP20.16■□□□□ 0.82
SOX17-201ENST00000297316 ALPPL2P10696 532 aa20.16■□□□□ 0.82
SOX17-201ENST00000297316 OR1E2P47887 323 aa20.16■□□□□ 0.82
SOX17-201ENST00000297316 TRA2BP62995 288 aaKnown RBP20.16■□□□□ 0.82
SOX17-201ENST00000297316 DUSP2Q05923 314 aa20.16■□□□□ 0.82
SOX17-201ENST00000297316 DEFB134Q4QY38 66 aa20.16■□□□□ 0.82
SOX17-201ENST00000297316 CEACAM20Q6UY09 585 aa20.16■□□□□ 0.82
SOX17-201ENST00000297316 CCDC80Q76M96 950 aa20.16■□□□□ 0.82
SOX17-201ENST00000297316 NT5CQ8TCD5 201 aa20.16■□□□□ 0.82
SOX17-201ENST00000297316 GLIPR2Q9H4G4 154 aa20.16■□□□□ 0.82
SOX17-201ENST00000297316 SERHL2Q9H4I8 314 aa20.16■□□□□ 0.82
SOX17-201ENST00000297316 SAMHD1Q9Y3Z3 626 aaKnown RBP20.16■□□□□ 0.82
SOX17-201ENST00000297316 ZDBF2Q9HCK1 2354 aa20.16■□□□□ 0.82
SOX17-201ENST00000297316 TECTAO75443 2155 aa20.16■□□□□ 0.82
SOX17-201ENST00000297316 A0A1B0GVT2 93 aa20.16■□□□□ 0.82
SOX17-201ENST00000297316 B4GAT1O43505 415 aa20.16■□□□□ 0.82
SOX17-201ENST00000297316 ERAL1O75616 437 aaKnown RBP20.16■□□□□ 0.82
SOX17-201ENST00000297316 C8orf89P0DMQ9 161 aa20.16■□□□□ 0.82
SOX17-201ENST00000297316 RPS6KA3P51812 740 aa20.16■□□□□ 0.82
SOX17-201ENST00000297316 PCBP3P57721 371 aaKnown RBP20.16■□□□□ 0.82
SOX17-201ENST00000297316 ZNF630Q2M218 657 aaPredicted RBP20.16■□□□□ 0.82
SOX17-201ENST00000297316 RPS26P11Q5JNZ5 115 aaPredicted RBP20.16■□□□□ 0.82
SOX17-201ENST00000297316 PRSS41Q7RTY9 318 aa20.16■□□□□ 0.82
SOX17-201ENST00000297316 SPPL2AQ8TCT8 520 aa20.16■□□□□ 0.82
SOX17-201ENST00000297316 GAL3ST3Q96A11 431 aa20.16■□□□□ 0.82
SOX17-201ENST00000297316 ZNF764Q96H86 408 aaPredicted RBP20.16■□□□□ 0.82
SOX17-201ENST00000297316 DUSP15Q9H1R2 295 aaPredicted RBP20.16■□□□□ 0.82
SOX17-201ENST00000297316 OCEL1Q9H607 264 aa20.16■□□□□ 0.82
SOX17-201ENST00000297316 ARID1BQ8NFD5 2236 aaPredicted RBP20.16■□□□□ 0.82
SOX17-201ENST00000297316 UBXN7O94888 489 aa20.15■□□□□ 0.82
SOX17-201ENST00000297316 FPR1P21462 350 aa20.15■□□□□ 0.82
SOX17-201ENST00000297316 DNAJA1P31689 397 aaKnown RBP20.15■□□□□ 0.82
SOX17-201ENST00000297316 ALDH3B2P48448 385 aa20.15■□□□□ 0.82
SOX17-201ENST00000297316 HNRNPKP61978 463 aaKnown RBP eCLIP20.15■□□□□ 0.82
SOX17-201ENST00000297316 OLR1P78380 273 aa20.15■□□□□ 0.82
SOX17-201ENST00000297316 ZXDAP98168 799 aa20.15■□□□□ 0.82
SOX17-201ENST00000297316 B3GNT6Q6ZMB0 384 aa20.15■□□□□ 0.82
SOX17-201ENST00000297316 C6orf120Q7Z4R8 191 aa20.15■□□□□ 0.82
SOX17-201ENST00000297316 SMYD1Q8NB12 490 aa20.15■□□□□ 0.82
SOX17-201ENST00000297316 RAB8BQ92930 207 aa20.15■□□□□ 0.82
SOX17-201ENST00000297316 ZBED6CLQ96FA7 236 aaPredicted RBP20.15■□□□□ 0.82
SOX17-201ENST00000297316 RSPO3Q9BXY4 272 aaPredicted RBP20.15■□□□□ 0.82
SOX17-201ENST00000297316 NEUROD4Q9HD90 331 aa20.15■□□□□ 0.82
SOX17-201ENST00000297316 TAS2R7Q9NYW3 318 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms