RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 RNF175Q8N4F7 328 aa8.56□□□□□ -1.04
CNOT9-202ENST00000295701 NKAPQ8N5F7 415 aaKnown RBP8.56□□□□□ -1.04
CNOT9-202ENST00000295701 MORN4Q8NDC4 146 aa8.56□□□□□ -1.04
CNOT9-202ENST00000295701 ACTRT1Q8TDG2 376 aa8.56□□□□□ -1.04
CNOT9-202ENST00000295701 ZNF721Q8TF20 911 aa8.56□□□□□ -1.04
CNOT9-202ENST00000295701 DAZLQ92904 295 aaKnown RBP8.56□□□□□ -1.04
CNOT9-202ENST00000295701 PPWD1Q96BP3 646 aaKnown RBP8.56□□□□□ -1.04
CNOT9-202ENST00000295701 RUNDC3BQ96NL0 473 aa8.56□□□□□ -1.04
CNOT9-202ENST00000295701 SERINC2Q96SA4 455 aa8.56□□□□□ -1.04
CNOT9-202ENST00000295701 NAT9Q9BTE0 207 aa8.56□□□□□ -1.04
CNOT9-202ENST00000295701 SORBS1Q9BX66 1292 aaKnown RBP8.56□□□□□ -1.04
CNOT9-202ENST00000295701 POLDIP3Q9BY77 421 aaKnown RBP8.56□□□□□ -1.04
CNOT9-202ENST00000295701 CXXC4Q9H2H0 198 aa8.56□□□□□ -1.04
CNOT9-202ENST00000295701 EXO5Q9H790 373 aa8.56□□□□□ -1.04
CNOT9-202ENST00000295701 NT5DC2Q9H857 520 aa8.56□□□□□ -1.04
CNOT9-202ENST00000295701 CAB39LQ9H9S4 337 aa8.56□□□□□ -1.04
CNOT9-202ENST00000295701 SMYD2Q9NRG4 433 aa8.56□□□□□ -1.04
CNOT9-202ENST00000295701 SACM1LQ9NTJ5 587 aa8.56□□□□□ -1.04
CNOT9-202ENST00000295701 CRIM1Q9NZV1 1036 aa8.56□□□□□ -1.04
CNOT9-202ENST00000295701 ST6GALNAC2Q9UJ37 374 aa8.56□□□□□ -1.04
CNOT9-202ENST00000295701 CORO1CQ9ULV4 474 aaPredicted RBP8.56□□□□□ -1.04
CNOT9-202ENST00000295701 MTO1Q9Y2Z2 717 aaKnown RBP8.56□□□□□ -1.04
CNOT9-202ENST00000295701 ANKHD1Q8IWZ3 2542 aaKnown RBP8.56□□□□□ -1.04
CNOT9-202ENST00000295701 TRGV5A0A0B4J1U4 118 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 OR14I1A6ND48 311 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 SAP18O00422 153 aaKnown RBP8.55□□□□□ -1.04
CNOT9-202ENST00000295701 CLGNO14967 610 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 PROM1O43490 865 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 FGF17O60258 216 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 PRKRAO75569 313 aaKnown RBP8.55□□□□□ -1.04
CNOT9-202ENST00000295701 WISP3O95389 354 aaPredicted RBP8.55□□□□□ -1.04
CNOT9-202ENST00000295701 TGFB1P01137 390 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 P04436 131 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 ATP5A1P25705 553 aaKnown RBP8.55□□□□□ -1.04
CNOT9-202ENST00000295701 KCNC1P48547 511 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 TRPC1P48995 793 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 HNMTP50135 292 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 MGAT5Q09328 741 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 FOXD4Q12950 439 aaPredicted RBP8.55□□□□□ -1.04
CNOT9-202ENST00000295701 TGFBIQ15582 683 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 OR4D1Q15615 310 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 HYAL4Q2M3T9 481 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 ZNF791Q3KP31 576 aaPredicted RBP8.55□□□□□ -1.04
CNOT9-202ENST00000295701 NKAPLQ5M9Q1 402 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 WLSQ5T9L3 541 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 NDUFAF5Q5TEU4 345 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 RGS9BPQ6ZS82 235 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 CAPN12Q6ZSI9 719 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 C9orf40Q8IXQ3 194 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 KRT78Q8N1N4 520 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 ACOT4Q8N9L9 421 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 SNX31Q8N9S9 440 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 RELL2Q8NC24 303 aaPredicted RBP8.55□□□□□ -1.04
CNOT9-202ENST00000295701 TTLQ8NG68 377 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 OR14A16Q8NHC5 309 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 KIAA1191Q96A73 305 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 SENP5Q96HI0 755 aaPredicted RBP8.55□□□□□ -1.04
CNOT9-202ENST00000295701 NAP1L3Q99457 506 aaPredicted RBP8.55□□□□□ -1.04
CNOT9-202ENST00000295701 FOXC2Q99958 501 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 SLC6A15Q9H2J7 730 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 COPS7BQ9H9Q2 264 aaPredicted RBP8.55□□□□□ -1.04
CNOT9-202ENST00000295701 SH2D2AQ9NP31 389 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 DNAJC11Q9NVH1 559 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 WWOXQ9NZC7 414 aa8.55□□□□□ -1.04
CNOT9-202ENST00000295701 MRPS33Q9Y291 106 aaKnown RBP8.55□□□□□ -1.04
CNOT9-202ENST00000295701 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.55□□□□□ -1.04
CNOT9-202ENST00000295701 MED12LQ86YW9 2145 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 EXPH5Q8NEV8 1989 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 A0A088AWK7 358 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 GOLGA6L10A0A0M3HER8 536 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 FAM221AA4D161 298 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 LRRC3CA6NJW4 275 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 CXorf49A8MYA2 514 aaPredicted RBP8.54□□□□□ -1.04
CNOT9-202ENST00000295701 TP73O15350 636 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 PHGDHO43175 533 aaKnown RBP8.54□□□□□ -1.04
CNOT9-202ENST00000295701 SUSD5O60279 629 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 WDR1O75083 606 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 SASH3O75995 380 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 CCDC166P0CW27 439 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 ZNF10P21506 573 aaPredicted RBP8.54□□□□□ -1.04
CNOT9-202ENST00000295701 UQCRC1P31930 480 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 KIR2DL3P43628 341 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 FOLH1Q04609 750 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 EFTUD2Q15029 972 aaKnown RBP eCLIP8.54□□□□□ -1.042e-6■■■■■ 47
CNOT9-202ENST00000295701 SLC22A10Q63ZE4 541 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 OPN5Q6U736 354 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 TMEM64Q6YI46 380 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 ADAMTSL2Q86TH1 951 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 KLHL7Q8IXQ5 586 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 PDIK1LQ8N165 341 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 GOLM1Q8NBJ4 401 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 NAXEQ8NCW5 288 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 FBXO36Q8NEA4 188 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 TNIP2Q8NFZ5 429 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 OR10G3Q8NGC4 313 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 OR5L2Q8NGL0 311 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 OR8K3Q8NH51 312 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 ANKRD7Q92527 254 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 UCN3Q969E3 161 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 SARAFQ96BY9 339 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms