RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 LOC105369274A0A096LPK9 316 aa15.7■□□□□ 0.1
CCDC40-201ENST00000269318 LOC102723532A0A0G2JNH3 316 aa15.7■□□□□ 0.1
CCDC40-201ENST00000269318 PRAMEF27A3QJZ7 478 aa15.7■□□□□ 0.1
CCDC40-201ENST00000269318 METTL12A8MUP2 240 aa15.7■□□□□ 0.1
CCDC40-201ENST00000269318 VILLO15195 856 aa15.7■□□□□ 0.1
CCDC40-201ENST00000269318 PVRP15151 417 aa15.7■□□□□ 0.1
CCDC40-201ENST00000269318 JUNDP17535 347 aa15.7■□□□□ 0.1
CCDC40-201ENST00000269318 CD27P26842 260 aa15.7■□□□□ 0.1
CCDC40-201ENST00000269318 ELK4P28324 431 aa15.7■□□□□ 0.1
CCDC40-201ENST00000269318 RNF44Q7L0R7 432 aa15.7■□□□□ 0.1
CCDC40-201ENST00000269318 CCDC116Q8IYX3 515 aa15.7■□□□□ 0.1
CCDC40-201ENST00000269318 OR4N4Q8N0Y3 316 aa15.7■□□□□ 0.1
CCDC40-201ENST00000269318 SFXN5Q8TD22 340 aa15.7■□□□□ 0.1
CCDC40-201ENST00000269318 ZDHHC1Q8WTX9 485 aa15.7■□□□□ 0.1
CCDC40-201ENST00000269318 APOBEC4Q8WW27 367 aaKnown RBP15.7■□□□□ 0.1
CCDC40-201ENST00000269318 SLC35G5Q96KT7 338 aa15.7■□□□□ 0.1
CCDC40-201ENST00000269318 C10orf90Q96M02 699 aa15.7■□□□□ 0.1
CCDC40-201ENST00000269318 ZFYVE21Q9BQ24 234 aa15.7■□□□□ 0.1
CCDC40-201ENST00000269318 RSPO3Q9BXY4 272 aaPredicted RBP15.7■□□□□ 0.1
CCDC40-201ENST00000269318 ROGDIQ9GZN7 287 aa15.7■□□□□ 0.1
CCDC40-201ENST00000269318 KCMF1Q9P0J7 381 aa15.7■□□□□ 0.1
CCDC40-201ENST00000269318 ENTPD4Q9Y227 616 aa15.7■□□□□ 0.1
CCDC40-201ENST00000269318 LYVE1Q9Y5Y7 322 aa15.7■□□□□ 0.1
CCDC40-201ENST00000269318 A0A0J9YY10 115 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 A0A1W2PR77 199 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 C5orf58C9J3I9 102 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 SH3BP5O60239 455 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 JRKO75564 520 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 CSNK2A2P19784 350 aaPredicted RBP15.69■□□□□ 0.1
CCDC40-201ENST00000269318 PTGER1P34995 402 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 MAGEA8P43361 318 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 PXNP49023 591 aaPredicted RBP15.69■□□□□ 0.1
CCDC40-201ENST00000269318 HHEXQ03014 270 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 SUZ12Q15022 739 aaKnown RBP15.69■□□□□ 0.1
CCDC40-201ENST00000269318 GPR19Q15760 415 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 DUSP7Q16829 419 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 CYP27C1Q4G0S4 372 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 ZNF691Q5VV52 312 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 BORAQ6PGQ7 559 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 GALNT5Q7Z7M9 940 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 RBM12BQ8IXT5 1001 aaKnown RBP15.69■□□□□ 0.1
CCDC40-201ENST00000269318 CAMKVQ8NCB2 501 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 FAM46DQ8NEK8 389 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 OR4C15Q8NGM1 316 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 SERINC2Q96SA4 455 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 OR51I1Q9H343 314 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 RUBCNLQ9H714 662 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 SEMA3GQ9NS98 782 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 WNT16Q9UBV4 365 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 OR5K3A6NET4 321 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 H0YGG7 62 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 ADAMDEC1O15204 470 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 MFN2O95140 757 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 C8orf89P0DMQ9 161 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 NR2F6P10588 404 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 CD247P20963 164 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 FEN1P39748 380 aaKnown RBP15.69■□□□□ 0.1
CCDC40-201ENST00000269318 XCR1P46094 333 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 ARF3P61204 181 aaPredicted RBP15.69■□□□□ 0.1
CCDC40-201ENST00000269318 ISL1P61371 349 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 PPP1CAP62136 330 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 TNFRSF17Q02223 184 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 IL18R1Q13478 541 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 RBM44Q6ZP01 1051 aaKnown RBP15.69■□□□□ 0.1
CCDC40-201ENST00000269318 ZNF761Q86XN6 746 aaPredicted RBP15.69■□□□□ 0.1
CCDC40-201ENST00000269318 DEFB119Q8N690 84 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 ZCCHC10Q8TBK6 192 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 RSC1A1Q92681 617 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 DGCR14Q96DF8 476 aaKnown RBP15.69■□□□□ 0.1
CCDC40-201ENST00000269318 THEGQ9P2T0 379 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 ZNF451Q9Y4E5 1061 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 TESMINQ9Y4I5 508 aa15.69■□□□□ 0.1
CCDC40-201ENST00000269318 DNAJB5O75953 348 aa15.68■□□□□ 0.1
CCDC40-201ENST00000269318 CSF2P04141 144 aa15.68■□□□□ 0.1
CCDC40-201ENST00000269318 OR12D1P0DN82 309 aa15.68■□□□□ 0.1
CCDC40-201ENST00000269318 ALPPL2P10696 532 aa15.68■□□□□ 0.1
CCDC40-201ENST00000269318 ITGA2P17301 1181 aa15.68■□□□□ 0.1
CCDC40-201ENST00000269318 HLCSP50747 726 aa15.68■□□□□ 0.1
CCDC40-201ENST00000269318 RUNX2Q13950 521 aa15.68■□□□□ 0.1
CCDC40-201ENST00000269318 PUM1Q14671 1186 aaKnown RBP eCLIP15.68■□□□□ 0.1
CCDC40-201ENST00000269318 DEFB134Q4QY38 66 aa15.68■□□□□ 0.1
CCDC40-201ENST00000269318 LAIR2Q6ISS4 152 aa15.68■□□□□ 0.1
CCDC40-201ENST00000269318 CHDHQ8NE62 594 aaPredicted RBP15.68■□□□□ 0.1
CCDC40-201ENST00000269318 CADM4Q8NFZ8 388 aa15.68■□□□□ 0.1
CCDC40-201ENST00000269318 OR5D16Q8NGK9 328 aa15.68■□□□□ 0.1
CCDC40-201ENST00000269318 FBLIM1Q8WUP2 373 aa15.68■□□□□ 0.1
CCDC40-201ENST00000269318 ING2Q9H160 280 aa15.68■□□□□ 0.1
CCDC40-201ENST00000269318 PCED1AQ9H1Q7 454 aa15.68■□□□□ 0.1
CCDC40-201ENST00000269318 SH3GLB1Q9Y371 365 aa15.68■□□□□ 0.1
CCDC40-201ENST00000269318 URADA6NGE7 173 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 E9PQ18 207 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 TNFRSF11BO00300 401 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 BCKDKO14874 412 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 NDUFS2O75306 463 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 NME1P15531 152 aaKnown RBP15.67■□□□□ 0.1
CCDC40-201ENST00000269318 MATN1P21941 496 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 MPIP34949 423 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 YAP1P46937 504 aaKnown RBP15.67■□□□□ 0.1
CCDC40-201ENST00000269318 LIM2P55344 173 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 CD47Q08722 323 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms