RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 SPRTNQ9H040 489 aaPredicted RBP13.29□□□□□ -0.28
SS18-201ENST00000269137 LRRN3Q9H3W5 708 aa13.29□□□□□ -0.28
SS18-201ENST00000269137 TMEM38AQ9H6F2 299 aa13.29□□□□□ -0.28
SS18-201ENST00000269137 SEMA3GQ9NS98 782 aa13.29□□□□□ -0.28
SS18-201ENST00000269137 ANAPC2Q9UJX6 822 aa13.29□□□□□ -0.28
SS18-201ENST00000269137 RAB23Q9ULC3 237 aa13.29□□□□□ -0.28
SS18-201ENST00000269137 A0A1W2PQM1 296 aa13.29□□□□□ -0.28
SS18-201ENST00000269137 CASQ2O14958 399 aaPredicted RBP13.29□□□□□ -0.28
SS18-201ENST00000269137 CHST10O43529 356 aa13.29□□□□□ -0.28
SS18-201ENST00000269137 RDH16O75452 317 aa13.29□□□□□ -0.28
SS18-201ENST00000269137 MED26O95402 600 aa13.29□□□□□ -0.28
SS18-201ENST00000269137 IL10P22301 178 aa13.29□□□□□ -0.28
SS18-201ENST00000269137 FEN1P39748 380 aaKnown RBP13.29□□□□□ -0.28
SS18-201ENST00000269137 CRATP43155 626 aa13.29□□□□□ -0.28
SS18-201ENST00000269137 CCL7P80098 99 aa13.29□□□□□ -0.28
SS18-201ENST00000269137 SIM1P81133 766 aaPredicted RBP13.29□□□□□ -0.28
SS18-201ENST00000269137 DUSP2Q05923 314 aa13.29□□□□□ -0.28
SS18-201ENST00000269137 RBBP4Q09028 425 aa13.29□□□□□ -0.28
SS18-201ENST00000269137 KCNAB1Q14722 419 aa13.29□□□□□ -0.28
SS18-201ENST00000269137 FAM214AQ32MH5 1076 aa13.29□□□□□ -0.28
SS18-201ENST00000269137 SNAP47Q5SQN1 464 aa13.29□□□□□ -0.28
SS18-201ENST00000269137 ZNF574Q6ZN55 896 aaPredicted RBP13.29□□□□□ -0.28
SS18-201ENST00000269137 DBX2Q6ZNG2 339 aa13.29□□□□□ -0.28
SS18-201ENST00000269137 C6orf120Q7Z4R8 191 aa13.29□□□□□ -0.28
SS18-201ENST00000269137 C11orf65Q8NCR3 313 aa13.29□□□□□ -0.28
SS18-201ENST00000269137 OR4D9Q8NGE8 314 aa13.29□□□□□ -0.28
SS18-201ENST00000269137 FAM162AQ96A26 154 aa13.29□□□□□ -0.28
SS18-201ENST00000269137 MOAP1Q96BY2 351 aa13.29□□□□□ -0.28
SS18-201ENST00000269137 SMOC1Q9H4F8 434 aa13.29□□□□□ -0.28
SS18-201ENST00000269137 C11orf16Q9NQ32 467 aa13.29□□□□□ -0.28
SS18-201ENST00000269137 DCAF13Q9NV06 445 aaKnown RBP13.29□□□□□ -0.28
SS18-201ENST00000269137 OLAHQ9NV23 265 aa13.29□□□□□ -0.28
SS18-201ENST00000269137 RIMS3Q9UJD0 308 aa13.29□□□□□ -0.28
SS18-201ENST00000269137 R4GN57 208 aa13.29□□□□□ -0.28
SS18-201ENST00000269137 A0A0A6YYC8 382 aaPredicted RBP13.28□□□□□ -0.28
SS18-201ENST00000269137 BLACEA4D250 179 aa13.28□□□□□ -0.28
SS18-201ENST00000269137 FAM86C2PA6NEL3 165 aa13.28□□□□□ -0.28
SS18-201ENST00000269137 H0YIG0 161 aa13.28□□□□□ -0.28
SS18-201ENST00000269137 I3L1I5 382 aaPredicted RBP13.28□□□□□ -0.28
SS18-201ENST00000269137 CASC3O15234 703 aaKnown RBP13.28□□□□□ -0.28
SS18-201ENST00000269137 B4GALT2O60909 372 aa13.28□□□□□ -0.28
SS18-201ENST00000269137 OR2B3O76000 313 aa13.28□□□□□ -0.28
SS18-201ENST00000269137 RPLP0P05388 317 aaKnown RBP13.28□□□□□ -0.28
SS18-201ENST00000269137 NUDT7P0C024 238 aa13.28□□□□□ -0.28
SS18-201ENST00000269137 ETFAP13804 333 aa13.28□□□□□ -0.28
SS18-201ENST00000269137 GPC1P35052 558 aa13.28□□□□□ -0.28
SS18-201ENST00000269137 PCGF2P35227 344 aa13.28□□□□□ -0.28
SS18-201ENST00000269137 VHLP40337 213 aa13.28□□□□□ -0.28
SS18-201ENST00000269137 GCGRP47871 477 aa13.28□□□□□ -0.28
SS18-201ENST00000269137 XKP51811 444 aa13.28□□□□□ -0.28
SS18-201ENST00000269137 SHC2P98077 582 aa13.28□□□□□ -0.28
SS18-201ENST00000269137 C16orf72Q14CZ0 275 aa13.28□□□□□ -0.28
SS18-201ENST00000269137 ZNF750Q32MQ0 723 aa13.28□□□□□ -0.28
SS18-201ENST00000269137 SPDYE7PQ495Y7 208 aa13.28□□□□□ -0.28
SS18-201ENST00000269137 GCNT6Q5T4J0 391 aa13.28□□□□□ -0.28
SS18-201ENST00000269137 ANGPTL8Q6UXH0 198 aa13.28□□□□□ -0.28
SS18-201ENST00000269137 ARHGAP22Q7Z5H3 698 aa13.28□□□□□ -0.28
SS18-201ENST00000269137 EID3Q8N140 333 aa13.28□□□□□ -0.28
SS18-201ENST00000269137 LILRA2Q8N149 483 aa13.28□□□□□ -0.28
SS18-201ENST00000269137 LRRC25Q8N386 305 aaPredicted RBP13.28□□□□□ -0.28
SS18-201ENST00000269137 NETO1Q8TDF5 533 aa13.28□□□□□ -0.28
SS18-201ENST00000269137 ADAMTS18Q8TE60 1221 aa13.28□□□□□ -0.28
SS18-201ENST00000269137 NCLNQ969V3 563 aa13.28□□□□□ -0.28
SS18-201ENST00000269137 IRAK4Q9NWZ3 460 aa13.28□□□□□ -0.28
SS18-201ENST00000269137 RAPGEFL1Q9UHV5 662 aa13.28□□□□□ -0.28
SS18-201ENST00000269137 ATXN7L1Q9ULK2 861 aaPredicted RBP13.28□□□□□ -0.28
SS18-201ENST00000269137 FAF1Q9UNN5 650 aaPredicted RBP13.28□□□□□ -0.28
SS18-201ENST00000269137 MAP4K5Q9Y4K4 846 aa13.28□□□□□ -0.28
SS18-201ENST00000269137 A0A1W2PS29 197 aa13.27□□□□□ -0.28
SS18-201ENST00000269137 A8MU76 341 aa13.27□□□□□ -0.28
SS18-201ENST00000269137 TMEM150CB9EJG8 249 aa13.27□□□□□ -0.28
SS18-201ENST00000269137 HNRNPRO43390 633 aaKnown RBP13.27□□□□□ -0.28
SS18-201ENST00000269137 GPR75O95800 540 aa13.27□□□□□ -0.28
SS18-201ENST00000269137 C8orf89P0DMQ9 161 aa13.27□□□□□ -0.28
SS18-201ENST00000269137 RNH1P13489 461 aaKnown RBP13.27□□□□□ -0.28
SS18-201ENST00000269137 CPMP14384 443 aa13.27□□□□□ -0.28
SS18-201ENST00000269137 FOLR1P15328 257 aa13.27□□□□□ -0.28
SS18-201ENST00000269137 HOXB6P17509 224 aaKnown RBP13.27□□□□□ -0.28
SS18-201ENST00000269137 GRK6P43250 576 aa13.27□□□□□ -0.28
SS18-201ENST00000269137 AVPR1BP47901 424 aa13.27□□□□□ -0.28
SS18-201ENST00000269137 DAB2P98082 770 aa13.27□□□□□ -0.28
SS18-201ENST00000269137 EEF1A2Q05639 463 aaKnown RBP13.27□□□□□ -0.28
SS18-201ENST00000269137 GPR19Q15760 415 aa13.27□□□□□ -0.28
SS18-201ENST00000269137 LAIR1Q6GTX8 287 aa13.27□□□□□ -0.28
SS18-201ENST00000269137 TCEAL6Q6IPX3 200 aa13.27□□□□□ -0.28
SS18-201ENST00000269137 TLDC1Q6P9B6 456 aa13.27□□□□□ -0.28
SS18-201ENST00000269137 BHLHB9Q6PI77 547 aa13.27□□□□□ -0.28
SS18-201ENST00000269137 TMPRSS9Q7Z410 1059 aa13.27□□□□□ -0.28
SS18-201ENST00000269137 IFI44Q8TCB0 444 aa13.27□□□□□ -0.28
SS18-201ENST00000269137 TCEAL3Q969E4 200 aa13.27□□□□□ -0.28
SS18-201ENST00000269137 MVB12AQ96EY5 273 aa13.27□□□□□ -0.28
SS18-201ENST00000269137 TACO1Q9BSH4 297 aaKnown RBP13.27□□□□□ -0.28
SS18-201ENST00000269137 UGT2B28Q9BY64 529 aa13.27□□□□□ -0.28
SS18-201ENST00000269137 NTMQ9P121 344 aa13.27□□□□□ -0.28
SS18-201ENST00000269137 AURKCQ9UQB9 309 aa13.27□□□□□ -0.28
SS18-201ENST00000269137 ASCC3Q8N3C0 2202 aaKnown RBP13.27□□□□□ -0.29
SS18-201ENST00000269137 CAPNS1P04632 268 aa13.27□□□□□ -0.29
SS18-201ENST00000269137 PORP16435 677 aaPredicted RBP13.27□□□□□ -0.29
SS18-201ENST00000269137 KDELR2P33947 212 aa13.27□□□□□ -0.29
SS18-201ENST00000269137 PRIM2P49643 509 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms