RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 NLNQ9BYT8 704 aa11.82□□□□□ -0.52
BEST3-201ENST00000266661 UCK2Q9BZX2 261 aa11.82□□□□□ -0.52
BEST3-201ENST00000266661 DYRK4Q9NR20 520 aa11.82□□□□□ -0.52
BEST3-201ENST00000266661 ITGB1BP2Q9UKP3 347 aa11.82□□□□□ -0.52
BEST3-201ENST00000266661 MGAT4BQ9UQ53 548 aa11.82□□□□□ -0.52
BEST3-201ENST00000266661 CAB39Q9Y376 341 aaPredicted RBP11.82□□□□□ -0.52
BEST3-201ENST00000266661 KIAA1549LQ6ZVL6 1849 aa11.82□□□□□ -0.52
BEST3-201ENST00000266661 C2orf16Q68DN1 1984 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 COL4A3Q01955 1670 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 TMEM265A0A087WTH1 108 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 PRAMEF27A3QJZ7 478 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 TLR4O00206 839 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 IGFBP1P08833 259 aaPredicted RBP11.81□□□□□ -0.52
BEST3-201ENST00000266661 KCNJ5P48544 419 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 DGKGP49619 791 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 TPTEP56180 551 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 CYP4F2P78329 520 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 NFE2L1Q14494 772 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 NCF4Q15080 339 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 DHCR24Q15392 516 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 TIMM50Q3ZCQ8 353 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 LEXMQ3ZCV2 418 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 TCEAL5Q5H9L2 206 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 ATAD3BQ5T9A4 648 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 KHDRBS2Q5VWX1 349 aaKnown RBP11.81□□□□□ -0.52
BEST3-201ENST00000266661 MEDAGQ5VYS4 303 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 DESI1Q6ICB0 168 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.81□□□□□ -0.52
BEST3-201ENST00000266661 C12orf40Q86WS4 652 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 TRAPPC5Q8IUR0 188 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 NATD1Q8N6N6 113 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 ANKRD53Q8N9V6 530 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 TMEM19Q96HH6 336 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 CTRCQ99895 268 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 MENTQ9BUN1 341 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 BARHL1Q9BZE3 327 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 ZCCHC2Q9C0B9 1178 aaKnown RBP11.81□□□□□ -0.52
BEST3-201ENST00000266661 KLHL25Q9H0H3 589 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 ABCG4Q9H172 646 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 SERHL2Q9H4I8 314 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 SIAEQ9HAT2 523 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 WASH6PQ9NQA3 447 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 CFL2Q9Y281 166 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 SLC27A6Q9Y2P4 619 aa11.81□□□□□ -0.52
BEST3-201ENST00000266661 NUP210Q8TEM1 1887 aaPredicted RBP11.81□□□□□ -0.52
BEST3-201ENST00000266661 HEPACAM2A8MVW5 462 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 LOC110117498-PIK3R3F6TDL0 507 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 HMGN4O00479 90 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 CTDSP2O14595 271 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 CYP17A1P05093 508 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 FOSL2P15408 326 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 ITGB7P26010 798 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 CSTF2P33240 577 aaKnown RBP eCLIP11.8□□□□□ -0.52
BEST3-201ENST00000266661 S100A5P33763 92 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 CRYBB2P43320 205 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 RPS26P62854 115 aaKnown RBP11.8□□□□□ -0.52
BEST3-201ENST00000266661 EFNB1P98172 346 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 MESP2Q0VG99 397 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 OCLNQ16625 522 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 ARHGAP15Q53QZ3 475 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 FAM180BQ6P0A1 224 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 PGBD2Q6P3X8 592 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 GDPGP1Q6ZNW5 385 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 FAM92BQ6ZTR7 304 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 HEATR4Q86WZ0 1026 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 SCAIQ8N9R8 606 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 GALNT6Q8NCL4 622 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 TMIEQ8NEW7 156 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 IL17RDQ8NFM7 739 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 WFIKKN2Q8TEU8 576 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 PIK3R3Q92569 461 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 NUS1Q96E22 293 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 GAS2L1Q99501 681 aaPredicted RBP11.8□□□□□ -0.52
BEST3-201ENST00000266661 PELI2Q9HAT8 420 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 C3orf14Q9HBI5 128 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 SLC35F4A4IF30 521 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 KPNA3O00505 521 aaPredicted RBP11.8□□□□□ -0.52
BEST3-201ENST00000266661 FAAHO00519 579 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 VEGFDO43915 354 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 MMP20O60882 483 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 MED26O95402 600 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 BCHEP06276 602 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 HSMCR30P0CW71 290 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 C6P13671 934 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 KELP23276 732 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 HOXD12P35452 270 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 NTHL1P78549 312 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 ALDH6A1Q02252 535 aaKnown RBP11.8□□□□□ -0.52
BEST3-201ENST00000266661 UBE3AQ05086 875 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 DLX2Q07687 328 aaPredicted RBP11.8□□□□□ -0.52
BEST3-201ENST00000266661 TSTA3Q13630 321 aaPredicted RBP11.8□□□□□ -0.52
BEST3-201ENST00000266661 MED22Q15528 200 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 TMEM52BQ4KMG9 183 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 SLC25A30Q5SVS4 291 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 C9orf64Q5T6V5 341 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 TNFAIP8L2Q6P589 184 aaPredicted RBP11.8□□□□□ -0.52
BEST3-201ENST00000266661 CD300LDQ6UXZ3 194 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 RTL10Q7L3V2 364 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 TRMT11Q7Z4G4 463 aaKnown RBP11.8□□□□□ -0.52
BEST3-201ENST00000266661 C6orf120Q7Z4R8 191 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms