RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 BNC1Q01954 994 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 TUBB3Q13509 450 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 NKAIN2Q5VXU1 208 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 FAM219BQ5XKK7 198 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 LCN8Q6JVE9 175 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 ENPP6Q6UWR7 440 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 VTCN1Q7Z7D3 282 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 ZCCHC7Q8N3Z6 543 aaKnown RBP13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 ARL14Q8N4G2 192 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 FAM98AQ8NCA5 519 aaKnown RBP13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 OR9A4Q8NGU2 314 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 ZDBF2Q9HCK1 2354 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 EFEMP2O95967 443 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 FPR1P21462 350 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 ATP5A1P25705 553 aaKnown RBP13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 TPP2P29144 1249 aaPredicted RBP13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 MC3RP41968 323 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 NETO1Q8TDF5 533 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 MRPL48Q96GC5 212 aaKnown RBP13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 TMEM19Q96HH6 336 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 SMURF2Q9HAU4 748 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 METTL12A8MUP2 240 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 SCDO00767 359 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 VASPP50552 380 aaPredicted RBP13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 ACY1Q03154 408 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 KCNC4Q03721 635 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 ZNF527Q8NB42 609 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 PHOSPHO1Q8TCT1 267 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 THAP3Q8WTV1 239 aaPredicted RBP13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 C5orf34Q96MH7 638 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 PRODH2Q9UF12 536 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 MKLN1Q9UL63 735 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 FAM86C2PA6NEL3 165 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 CPSF4LA6NMK7 179 aaKnown RBP13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 ANHXE9PGG2 379 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 KHNYNO15037 678 aaKnown RBP13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 ADAM23O75077 832 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 IMPDH2P12268 514 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 BMP8BP34820 402 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 HBA1P69905 142 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 FLYWCH1Q4VC44 716 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 CRB2Q5IJ48 1285 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 ADNP2Q6IQ32 1131 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 FIGNL1Q6PIW4 674 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 ZC3H14Q6PJT7 736 aaKnown RBP13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 KIAA0907Q7Z7F0 614 aaPredicted RBP13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 APLFQ8IW19 511 aaPredicted RBP13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 ALOXE3Q9BYJ1 711 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 S1PR5Q9H228 398 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 MBD1Q9UIS9 605 aaPredicted RBP13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 HCN2Q9UL51 889 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 LIPT1Q9Y234 373 aa13.73□□□□□ -0.21
PDLIM2-201ENST00000265810 RGS5O15539 181 aa13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 MAN1A2O60476 641 aa13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 CER1O95813 267 aa13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 B3GALT4O96024 378 aa13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 CPOXP36551 454 aa13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 BCL6P41182 706 aa13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 OC90Q02509 493 aaPredicted RBP13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 CARM1Q86X55 608 aa13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 BBS10Q8TAM1 723 aa13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 RSC1A1Q92681 617 aa13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 NAT6Q93015 286 aa13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 ALPK1Q96QP1 1244 aa13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 TM9SF3Q9HD45 589 aa13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 TBC1D23Q9NUY8 699 aa13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 TEX10Q9NXF1 929 aaPredicted RBP13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 C19orf25Q9UFG5 118 aaPredicted RBP13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 ERGIC3Q9Y282 383 aa13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 YY2O15391 372 aa13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 PCDHGA12O60330 932 aa13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 TSPAN19P0C672 248 aa13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 ARSFP54793 590 aa13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 SMARCD3Q6STE5 483 aa13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 PARP8Q8N3A8 854 aa13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 C19orf47Q8N9M1 422 aaKnown RBP13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 DAZLQ92904 295 aaKnown RBP13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 SLC24A3Q9HC58 644 aa13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 TMPRSS11EQ9UL52 423 aa13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 ICKQ9UPZ9 632 aa13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 HYKKA2RU49 373 aa13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 KIAA1614Q5VZ46 1190 aa13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 SGPP1Q9BX95 441 aa13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 MRPS26Q9BYN8 205 aaKnown RBP13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 PAPOLBQ9NRJ5 636 aaKnown RBP13.72□□□□□ -0.21
PDLIM2-201ENST00000265810 PTNP21246 168 aa13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 XCR1P46094 333 aa13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 TMEM151AQ8N4L1 468 aa13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 PACRGLQ8N7B6 248 aa13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 AMBNQ9NP70 447 aa13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 TVP23BQ9NYZ1 205 aa13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 MAP10Q9P2G4 905 aa13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 SPTY2D1-AS1A0A0U1RR47 76 aa13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 MCIDASD6RGH6 385 aa13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 CDK9P50750 372 aaKnown RBP13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 TMED1Q13445 227 aa13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 SELPLGQ14242 412 aa13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 UGT8Q16880 541 aa13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 ZNF547Q8IVP9 402 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms