RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 PCNX1Q96RV3 2341 aa6.77□□□□□ -1.33
DEPDC1B-201ENST00000265036 NINQ8N4C6 2090 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 GOLGA8QA0A0J9YX86 632 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 GOLGA8OA6NCC3 632 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 GOLGA8NF8WBI6 632 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 LSM1O15116 133 aaKnown RBP6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 CTNSO60931 367 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 SERPINA7P05543 415 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 ERVK-8P63133 956 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 ZNF763Q0D2J5 394 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 NNATQ16517 81 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 PLAG1Q6DJT9 500 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 OR52E8Q6IFG1 317 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 FAM47EQ6ZV65 393 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 CLYBLQ8N0X4 340 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 APCDD1LQ8NCL9 501 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 DNAJB14Q8TBM8 379 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 C16orf78Q8WTQ4 265 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 TUBGCP3Q96CW5 907 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 C19orf60Q96EN9 201 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 THOC1Q96FV9 657 aaKnown RBP6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 DGAT2Q96PD7 388 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 GAL3ST4Q96RP7 486 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 NPAS2Q99743 824 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 ADAP2Q9NPF8 381 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 NMRK1Q9NWW6 199 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 MS4A12Q9NXJ0 267 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 ZNF223Q9UK11 482 aaPredicted RBP6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 UTS2RQ9UKP6 389 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 ERVK-19Q9WJR5 959 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 UTP20O75691 2785 aaKnown RBP6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 BAHCC1Q9P281 2608 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 HMGB1P1B2RPK0 211 aaPredicted RBP6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 TMEM114B3SHH9 223 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 RGS14O43566 566 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 CEACAM4O75871 244 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 RSL1D1O76021 490 aaKnown RBP6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 CT62P0C5K7 136 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 SDC1P18827 310 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 PIK3R1P27986 724 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 SSTR4P31391 388 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 HK2P52789 917 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 PLIN5Q00G26 463 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 SF3A3Q12874 501 aaKnown RBP eCLIP6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 ZNF267Q14586 743 aaPredicted RBP6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 ELAVL1Q15717 326 aaKnown RBP6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 PRSS53Q2L4Q9 553 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 PRR30Q53SZ7 412 aaPredicted RBP6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 AGAP7PQ5VUJ5 663 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 NOXRED1Q6NXP6 359 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 TRIM46Q7Z4K8 759 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 BEST3Q8N1M1 668 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 TMEM132CQ8N3T6 1108 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 FNDC5Q8NAU1 212 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 B3GNT7Q8NFL0 401 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 SLC2A12Q8TD20 617 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 PTPMT1Q8WUK0 201 aaPredicted RBP6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 C11orf24Q96F05 449 aaPredicted RBP6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 CNRIP1Q96F85 164 aaPredicted RBP6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 MARK4Q96L34 752 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 AGAP4Q96P64 663 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 MANSC1Q9H8J5 431 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 MIEF1Q9NQG6 463 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 C1orf109Q9NX04 203 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 MCM8Q9UJA3 840 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 ADAM29Q9UKF5 820 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 G3BP2Q9UN86 482 aaKnown RBP6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 RAP2CQ9Y3L5 183 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 SHANK1Q9Y566 2161 aa6.76□□□□□ -1.33
DEPDC1B-201ENST00000265036 C9JVG2 144 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 H3BQF6 201 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 GPR75O95800 540 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 ALPPP05187 535 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 NT5EP21589 574 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 GRK2P25098 689 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 XKP51811 444 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 MLLT10P55197 1068 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 NME5P56597 212 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 NAA20P61599 178 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 PPP2R2AP63151 447 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 C2orf80Q0P641 193 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 ESPL1Q14674 2120 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 KIAA0040Q15053 153 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 ATP6AP1LQ52LC2 224 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 XKR7Q5GH72 579 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 TCTN3Q6NUS6 607 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 SLC48A1Q6P1K1 146 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 TICAM1Q8IUC6 712 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 CRLF3Q8IUI8 442 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 ZNF843Q8N446 348 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 TEX19Q8NA77 164 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 CATSPER1Q8NEC5 780 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 NFAM1Q8NET5 270 aaPredicted RBP6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 NACC2Q96BF6 587 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 RBM18Q96H35 190 aaKnown RBP6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 VPS50Q96JG6 964 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 BRINP2Q9C0B6 783 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 ILKAPQ9H0C8 392 aaPredicted RBP6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 CLK4Q9HAZ1 481 aaKnown RBP6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 INTS9Q9NV88 658 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms