RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 SNRPD2P62316 118 aaKnown RBP17.25■□□□□ 0.35
COL5A3-201ENST00000264828 ALG10BQ5I7T1 473 aa17.25■□□□□ 0.35
COL5A3-201ENST00000264828 FAM72AQ5TYM5 149 aa17.25■□□□□ 0.35
COL5A3-201ENST00000264828 UBE2UQ5VVX9 321 aa17.25■□□□□ 0.35
COL5A3-201ENST00000264828 ATG9BQ674R7 924 aa17.25■□□□□ 0.35
COL5A3-201ENST00000264828 TMEM225Q6GV28 225 aa17.25■□□□□ 0.35
COL5A3-201ENST00000264828 FAM72DQ6L9T8 149 aa17.25■□□□□ 0.35
COL5A3-201ENST00000264828 FAM72BQ86X60 149 aa17.25■□□□□ 0.35
COL5A3-201ENST00000264828 ARL6Q9H0F7 186 aa17.25■□□□□ 0.35
COL5A3-201ENST00000264828 SRA1Q9HD15 236 aaKnown RBP17.25■□□□□ 0.35
COL5A3-201ENST00000264828 CLDND1Q9NY35 253 aa17.25■□□□□ 0.35
COL5A3-201ENST00000264828 HCRTR2O43614 444 aa17.25■□□□□ 0.35
COL5A3-201ENST00000264828 OR2B3O76000 313 aa17.25■□□□□ 0.35
COL5A3-201ENST00000264828 APOC3P02656 99 aa17.25■□□□□ 0.35
COL5A3-201ENST00000264828 CD9P21926 228 aa17.25■□□□□ 0.35
COL5A3-201ENST00000264828 MAGEA3P43357 314 aa17.25■□□□□ 0.35
COL5A3-201ENST00000264828 CLCA4Q14CN2 919 aa17.25■□□□□ 0.35
COL5A3-201ENST00000264828 GRASPQ7Z6J2 395 aaPredicted RBP17.25■□□□□ 0.35
COL5A3-201ENST00000264828 TMEM126BQ8IUX1 230 aa17.25■□□□□ 0.35
COL5A3-201ENST00000264828 PLEKHO2Q8TD55 490 aa17.25■□□□□ 0.35
COL5A3-201ENST00000264828 ZDHHC1Q8WTX9 485 aa17.25■□□□□ 0.35
COL5A3-201ENST00000264828 PPIL3Q9H2H8 161 aaKnown RBP17.25■□□□□ 0.35
COL5A3-201ENST00000264828 CD93Q9NPY3 652 aa17.25■□□□□ 0.35
COL5A3-201ENST00000264828 FEZF1A0PJY2 475 aa17.25■□□□□ 0.35
COL5A3-201ENST00000264828 LEFTY2O00292 366 aa17.25■□□□□ 0.35
COL5A3-201ENST00000264828 HS3ST5Q8IZT8 346 aa17.25■□□□□ 0.35
COL5A3-201ENST00000264828 THAP3Q8WTV1 239 aaPredicted RBP17.25■□□□□ 0.35
COL5A3-201ENST00000264828 TRIB2Q92519 343 aa17.25■□□□□ 0.35
COL5A3-201ENST00000264828 OARD1Q9Y530 152 aa17.25■□□□□ 0.35
COL5A3-201ENST00000264828 HNF1BP35680 557 aa17.25■□□□□ 0.35
COL5A3-201ENST00000264828 UGT2B10P36537 528 aa17.25■□□□□ 0.35
COL5A3-201ENST00000264828 GATMP50440 423 aa17.25■□□□□ 0.35
COL5A3-201ENST00000264828 SNIP1Q8TAD8 396 aaKnown RBP17.25■□□□□ 0.35
COL5A3-201ENST00000264828 CCM2LQ9NUG4 571 aaPredicted RBP17.25■□□□□ 0.35
COL5A3-201ENST00000264828 GJD2Q9UKL4 321 aa17.25■□□□□ 0.35
COL5A3-201ENST00000264828 AKR1C4P17516 323 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 AMY2BP19961 511 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 GPR4P46093 362 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 JAG1P78504 1218 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 KCNC3Q14003 757 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 TECRLQ5HYJ1 363 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 ELMOD2Q8IZ81 293 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 OR4C15Q8NGM1 316 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 TXNRD2Q9NNW7 524 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 FAM118AQ9NWS6 357 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 HOXD8P13378 290 aaPredicted RBP17.24■□□□□ 0.35
COL5A3-201ENST00000264828 SLC16A9Q7RTY1 509 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 KCNJ9Q92806 393 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 POPDC3Q9HBV1 291 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 TDP1Q9NUW8 608 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 ASB6Q9NWX5 421 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 NRXN3Q9Y4C0 1643 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 RAD51DO75771 328 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 S100PP25815 95 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 FRKP42685 505 aaPredicted RBP17.24■□□□□ 0.35
COL5A3-201ENST00000264828 CFAP77Q6ZQR2 320 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 LGALS12Q96DT0 336 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 TMEM68Q96MH6 324 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 HDHD5Q9BXW7 423 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 EEF1E1-BLOC1S5C9J1V9 151 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 FBP2O00757 339 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 TSPAN6O43657 245 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 HOXB2P14652 356 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 KRBOX4Q5JUW0 171 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 PLEKHS1Q5SXH7 462 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 CES4AQ5XG92 561 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 SHFQ7M4L6 423 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 GKN2Q86XP6 184 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 NPY6RQ99463 290 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 TMEM121BQ9BXQ6 578 aaPredicted RBP17.24■□□□□ 0.35
COL5A3-201ENST00000264828 POT1Q9NUX5 634 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 GPR83Q9NYM4 423 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 STUB1Q9UNE7 303 aa17.24■□□□□ 0.35
COL5A3-201ENST00000264828 TRBV2A0A0J9YWF9 115 aa17.23■□□□□ 0.35
COL5A3-201ENST00000264828 DCKP27707 260 aa17.23■□□□□ 0.35
COL5A3-201ENST00000264828 UNC50Q53HI1 259 aa17.23■□□□□ 0.35
COL5A3-201ENST00000264828 ZFAND2BQ8WV99 257 aa17.23■□□□□ 0.35
COL5A3-201ENST00000264828 PRR11Q96HE9 360 aaPredicted RBP17.23■□□□□ 0.35
COL5A3-201ENST00000264828 OR2B2Q9GZK3 357 aa17.23■□□□□ 0.35
COL5A3-201ENST00000264828 SAV1Q9H4B6 383 aaPredicted RBP17.23■□□□□ 0.35
COL5A3-201ENST00000264828 IL21RQ9HBE5 538 aa17.23■□□□□ 0.35
COL5A3-201ENST00000264828 PRTFDC1Q9NRG1 225 aa17.23■□□□□ 0.35
COL5A3-201ENST00000264828 ERVK-19Q9WJR5 959 aa17.23■□□□□ 0.35
COL5A3-201ENST00000264828 CDKN2DP55273 166 aa17.23■□□□□ 0.35
COL5A3-201ENST00000264828 ZNF423Q2M1K9 1284 aa17.23■□□□□ 0.35
COL5A3-201ENST00000264828 ZNF792Q3KQV3 632 aa17.23■□□□□ 0.35
COL5A3-201ENST00000264828 LIPJQ5W064 366 aa17.23■□□□□ 0.35
COL5A3-201ENST00000264828 SFRP4Q6FHJ7 346 aaPredicted RBP17.23■□□□□ 0.35
COL5A3-201ENST00000264828 Q6ZVL8 140 aa17.23■□□□□ 0.35
COL5A3-201ENST00000264828 OR5P2Q8WZ92 322 aa17.23■□□□□ 0.35
COL5A3-201ENST00000264828 ACSL6Q9UKU0 697 aa17.23■□□□□ 0.35
COL5A3-201ENST00000264828 HPRP00739 348 aa17.23■□□□□ 0.35
COL5A3-201ENST00000264828 ALDOAP04075 364 aaKnown RBP17.23■□□□□ 0.35
COL5A3-201ENST00000264828 SLAMF1Q13291 335 aa17.23■□□□□ 0.35
COL5A3-201ENST00000264828 PLEKHG7Q6ZR37 379 aa17.23■□□□□ 0.35
COL5A3-201ENST00000264828 CYP4V2Q6ZWL3 525 aaPredicted RBP17.23■□□□□ 0.35
COL5A3-201ENST00000264828 ZNF550Q7Z398 422 aa17.23■□□□□ 0.35
COL5A3-201ENST00000264828 GPR88Q9GZN0 384 aa17.23■□□□□ 0.35
COL5A3-201ENST00000264828 TRIM64BA6NI03 449 aa17.23■□□□□ 0.35
COL5A3-201ENST00000264828 B8ZZF3 427 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms