RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 LCA5Q86VQ0 697 aa14.9□□□□□ -0.02
USE1-201ENST00000263897 CHERPQ8IWX8 916 aaKnown RBP14.9□□□□□ -0.02
USE1-201ENST00000263897 PSD4Q8NDX1 1056 aa14.9□□□□□ -0.02
USE1-201ENST00000263897 ITLN2Q8WWU7 325 aaPredicted RBP14.9□□□□□ -0.02
USE1-201ENST00000263897 UCN3Q969E3 161 aa14.9□□□□□ -0.02
USE1-201ENST00000263897 CCDC120Q96HB5 630 aa14.9□□□□□ -0.02
USE1-201ENST00000263897 ART5Q96L15 291 aa14.9□□□□□ -0.02
USE1-201ENST00000263897 PELOQ9BRX2 385 aaKnown RBP14.9□□□□□ -0.02
USE1-201ENST00000263897 EPB41L4BQ9H329 900 aa14.9□□□□□ -0.02
USE1-201ENST00000263897 DEPPQ9NTK1 212 aa14.9□□□□□ -0.02
USE1-201ENST00000263897 TINAGQ9UJW2 476 aa14.9□□□□□ -0.02
USE1-201ENST00000263897 ADAM29Q9UKF5 820 aa14.9□□□□□ -0.02
USE1-201ENST00000263897 DNAJC13O75165 2243 aa14.89□□□□□ -0.03
USE1-201ENST00000263897 ZNF407Q9C0G0 2248 aa14.89□□□□□ -0.03
USE1-201ENST00000263897 IQANK1A0A1B0GTG1 560 aa14.89□□□□□ -0.03
USE1-201ENST00000263897 HRKO00198 91 aa14.89□□□□□ -0.03
USE1-201ENST00000263897 PGRMC2O15173 223 aa14.89□□□□□ -0.03
USE1-201ENST00000263897 ZNF354AO60765 605 aaPredicted RBP14.89□□□□□ -0.03
USE1-201ENST00000263897 AIFM1O95831 613 aa14.89□□□□□ -0.03
USE1-201ENST00000263897 KLK1P06870 262 aa14.89□□□□□ -0.03
USE1-201ENST00000263897 SLC35E2P0CK97 266 aa14.89□□□□□ -0.03
USE1-201ENST00000263897 TSPAN8P19075 237 aa14.89□□□□□ -0.03
USE1-201ENST00000263897 GALNSP34059 522 aa14.89□□□□□ -0.03
USE1-201ENST00000263897 RFC3P40938 356 aa14.89□□□□□ -0.03
USE1-201ENST00000263897 GPR85P60893 370 aa14.89□□□□□ -0.03
USE1-201ENST00000263897 HERVK_113P63132 956 aa14.89□□□□□ -0.03
USE1-201ENST00000263897 OPN5Q6U736 354 aa14.89□□□□□ -0.03
USE1-201ENST00000263897 CNPY4Q8N129 248 aa14.89□□□□□ -0.03
USE1-201ENST00000263897 METTL4Q8N3J2 472 aa14.89□□□□□ -0.03
USE1-201ENST00000263897 NUBPLQ8TB37 319 aa14.89□□□□□ -0.03
USE1-201ENST00000263897 ACMSDQ8TDX5 336 aa14.89□□□□□ -0.03
USE1-201ENST00000263897 TRPC4APQ8TEL6 797 aa14.89□□□□□ -0.03
USE1-201ENST00000263897 FBXL20Q96IG2 436 aa14.89□□□□□ -0.03
USE1-201ENST00000263897 SGCZQ96LD1 299 aa14.89□□□□□ -0.03
USE1-201ENST00000263897 ERVK-6Q9BXR3 956 aa14.89□□□□□ -0.03
USE1-201ENST00000263897 MRPL1Q9BYD6 325 aaKnown RBP14.89□□□□□ -0.03
USE1-201ENST00000263897 ELOVL6Q9H5J4 265 aa14.89□□□□□ -0.03
USE1-201ENST00000263897 FARSBQ9NSD9 589 aaKnown RBP14.89□□□□□ -0.03
USE1-201ENST00000263897 ZNF225Q9UK10 706 aa14.89□□□□□ -0.03
USE1-201ENST00000263897 TFECO14948 347 aaPredicted RBP14.88□□□□□ -0.03
USE1-201ENST00000263897 ZNHIT1O43257 154 aa14.88□□□□□ -0.03
USE1-201ENST00000263897 HS6ST1O60243 411 aa14.88□□□□□ -0.03
USE1-201ENST00000263897 DLX3O60479 287 aa14.88□□□□□ -0.03
USE1-201ENST00000263897 PDYNP01213 254 aa14.88□□□□□ -0.03
USE1-201ENST00000263897 ESRRAP11474 423 aaPredicted RBP14.88□□□□□ -0.03
USE1-201ENST00000263897 ABOP16442 354 aa14.88□□□□□ -0.03
USE1-201ENST00000263897 IMPDH1P20839 514 aa14.88□□□□□ -0.03
USE1-201ENST00000263897 CNR1P21554 472 aa14.88□□□□□ -0.03
USE1-201ENST00000263897 PTGER1P34995 402 aa14.88□□□□□ -0.03
USE1-201ENST00000263897 HSF1Q00613 529 aa14.88□□□□□ -0.03
USE1-201ENST00000263897 CLCQ05315 142 aa14.88□□□□□ -0.03
USE1-201ENST00000263897 ASPHQ12797 758 aa14.88□□□□□ -0.03
USE1-201ENST00000263897 ART3Q13508 389 aa14.88□□□□□ -0.03
USE1-201ENST00000263897 ZNF267Q14586 743 aaPredicted RBP14.88□□□□□ -0.03
USE1-201ENST00000263897 SPRED3Q2MJR0 410 aa14.88□□□□□ -0.03
USE1-201ENST00000263897 UNC50Q53HI1 259 aa14.88□□□□□ -0.03
USE1-201ENST00000263897 ZNF678Q5SXM1 525 aa14.88□□□□□ -0.03
USE1-201ENST00000263897 CCNYL2Q5T2Q4 361 aa14.88□□□□□ -0.03
USE1-201ENST00000263897 SP5Q6BEB4 398 aaPredicted RBP14.88□□□□□ -0.03
USE1-201ENST00000263897 LETMD1Q6P1Q0 360 aa14.88□□□□□ -0.03
USE1-201ENST00000263897 RTL4Q6ZR62 310 aa14.88□□□□□ -0.03
USE1-201ENST00000263897 PAGE2Q7Z2X7 111 aa14.88□□□□□ -0.03
USE1-201ENST00000263897 FGD2Q7Z6J4 655 aa14.88□□□□□ -0.03
USE1-201ENST00000263897 MRGPRGQ86SM5 289 aa14.88□□□□□ -0.03
USE1-201ENST00000263897 C9orf40Q8IXQ3 194 aa14.88□□□□□ -0.03
USE1-201ENST00000263897 SLC34A3Q8N130 599 aa14.88□□□□□ -0.03
USE1-201ENST00000263897 ZNF808Q8N4W9 903 aaPredicted RBP14.88□□□□□ -0.03
USE1-201ENST00000263897 EIF1ADQ8N9N8 165 aaKnown RBP14.88□□□□□ -0.03
USE1-201ENST00000263897 GOLM1Q8NBJ4 401 aa14.88□□□□□ -0.03
USE1-201ENST00000263897 LRRN4CLQ8ND94 238 aa14.88□□□□□ -0.03
USE1-201ENST00000263897 DOK4Q8TEW6 326 aa14.88□□□□□ -0.03
USE1-201ENST00000263897 RIT1Q92963 219 aa14.88□□□□□ -0.03
USE1-201ENST00000263897 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.88□□□□□ -0.03
USE1-201ENST00000263897 TEX10Q9NXF1 929 aaPredicted RBP14.88□□□□□ -0.03
USE1-201ENST00000263897 SNX6Q9UNH7 406 aa14.88□□□□□ -0.03
USE1-201ENST00000263897 NBPF19A0A087WUL8 3843 aa14.87□□□□□ -0.03
USE1-201ENST00000263897 GOLGA8RI6L899 631 aa14.87□□□□□ -0.03
USE1-201ENST00000263897 OR10H2O60403 315 aa14.87□□□□□ -0.03
USE1-201ENST00000263897 SUPT7LO94864 414 aa14.87□□□□□ -0.03
USE1-201ENST00000263897 OR4F21O95013 312 aa14.87□□□□□ -0.03
USE1-201ENST00000263897 GSTA1P08263 222 aa14.87□□□□□ -0.03
USE1-201ENST00000263897 ATP5F1P24539 256 aaPredicted RBP14.87□□□□□ -0.03
USE1-201ENST00000263897 PIK3R1P27986 724 aa14.87□□□□□ -0.03
USE1-201ENST00000263897 ERVK-8P63133 956 aa14.87□□□□□ -0.03
USE1-201ENST00000263897 CMPK2Q5EBM0 449 aa14.87□□□□□ -0.03
USE1-201ENST00000263897 OR52E8Q6IFG1 317 aa14.87□□□□□ -0.03
USE1-201ENST00000263897 RPTNQ6XPR3 784 aa14.87□□□□□ -0.03
USE1-201ENST00000263897 DOLPP1Q86YN1 238 aa14.87□□□□□ -0.03
USE1-201ENST00000263897 SLC15A4Q8N697 577 aa14.87□□□□□ -0.03
USE1-201ENST00000263897 OR2M7Q8NG81 312 aa14.87□□□□□ -0.03
USE1-201ENST00000263897 OR52N2Q8NGI0 321 aa14.87□□□□□ -0.03
USE1-201ENST00000263897 MZB1Q8WU39 189 aa14.87□□□□□ -0.03
USE1-201ENST00000263897 SELENOMQ8WWX9 145 aa14.87□□□□□ -0.03
USE1-201ENST00000263897 CNPPD1Q9BV87 410 aa14.87□□□□□ -0.03
USE1-201ENST00000263897 BRF2Q9HAW0 419 aa14.87□□□□□ -0.03
USE1-201ENST00000263897 NMRK1Q9NWW6 199 aa14.87□□□□□ -0.03
USE1-201ENST00000263897 PSMC3IPQ9P2W1 217 aaPredicted RBP14.87□□□□□ -0.03
USE1-201ENST00000263897 TBK1Q9UHD2 729 aa14.87□□□□□ -0.03
USE1-201ENST00000263897 TRPS1Q9UHF7 1281 aa14.87□□□□□ -0.03
USE1-201ENST00000263897 DCDC2Q9UHG0 476 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms