RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 VPS4BO75351 444 aa17.52■□□□□ 0.4
CYSTM1-201ENST00000261811 PRKRAO75569 313 aaKnown RBP17.52■□□□□ 0.4
CYSTM1-201ENST00000261811 IL3P08700 152 aa17.52■□□□□ 0.4
CYSTM1-201ENST00000261811 SLC35E2P0CK97 266 aa17.52■□□□□ 0.4
CYSTM1-201ENST00000261811 CSNK2A2P19784 350 aaPredicted RBP17.52■□□□□ 0.4
CYSTM1-201ENST00000261811 NR1D1P20393 614 aa17.52■□□□□ 0.4
CYSTM1-201ENST00000261811 GALNSP34059 522 aa17.52■□□□□ 0.4
CYSTM1-201ENST00000261811 ASMTP46597 345 aa17.52■□□□□ 0.4
CYSTM1-201ENST00000261811 HK2P52789 917 aa17.52■□□□□ 0.4
CYSTM1-201ENST00000261811 RPL38P63173 70 aaKnown RBP17.52■□□□□ 0.4
CYSTM1-201ENST00000261811 ID2Q02363 134 aa17.52■□□□□ 0.4
CYSTM1-201ENST00000261811 C2orf80Q0P641 193 aa17.52■□□□□ 0.4
CYSTM1-201ENST00000261811 Q0VFX4 171 aa17.52■□□□□ 0.4
CYSTM1-201ENST00000261811 ABHD17BQ5VST6 288 aa17.52■□□□□ 0.4
CYSTM1-201ENST00000261811 FAM219BQ5XKK7 198 aa17.52■□□□□ 0.4
CYSTM1-201ENST00000261811 PCSK4Q6UW60 755 aa17.52■□□□□ 0.4
CYSTM1-201ENST00000261811 ZADH2Q8N4Q0 377 aa17.52■□□□□ 0.4
CYSTM1-201ENST00000261811 SLC5A8Q8N695 610 aa17.52■□□□□ 0.4
CYSTM1-201ENST00000261811 BRIX1Q8TDN6 353 aaKnown RBP17.52■□□□□ 0.4
CYSTM1-201ENST00000261811 ZNF75CPQ92670 426 aaPredicted RBP17.52■□□□□ 0.4
CYSTM1-201ENST00000261811 KLHL29Q96CT2 875 aa17.52■□□□□ 0.4
CYSTM1-201ENST00000261811 ZNF354BQ96LW1 612 aa17.52■□□□□ 0.4
CYSTM1-201ENST00000261811 LMF1Q96S06 567 aa17.52■□□□□ 0.4
CYSTM1-201ENST00000261811 SORT1Q99523 831 aa17.52■□□□□ 0.4
CYSTM1-201ENST00000261811 ZNF552Q9H707 407 aaPredicted RBP17.52■□□□□ 0.4
CYSTM1-201ENST00000261811 MYNNQ9NPC7 610 aa17.52■□□□□ 0.4
CYSTM1-201ENST00000261811 MIEF1Q9NQG6 463 aa17.52■□□□□ 0.4
CYSTM1-201ENST00000261811 ZNF71Q9NQZ8 489 aaPredicted RBP17.52■□□□□ 0.4
CYSTM1-201ENST00000261811 EHD3Q9NZN3 535 aa17.52■□□□□ 0.4
CYSTM1-201ENST00000261811 PTGDR2Q9Y5Y4 395 aa17.52■□□□□ 0.4
CYSTM1-201ENST00000261811 TRPC5OSA6NMA1 111 aa17.51■□□□□ 0.39
CYSTM1-201ENST00000261811 A8MUI8 341 aa17.51■□□□□ 0.39
CYSTM1-201ENST00000261811 TGFBR3LH3BV60 316 aa17.51■□□□□ 0.39
CYSTM1-201ENST00000261811 PGRMC2O15173 223 aa17.51■□□□□ 0.39
CYSTM1-201ENST00000261811 SNNO75324 88 aaPredicted RBP17.51■□□□□ 0.39
CYSTM1-201ENST00000261811 ERAL1O75616 437 aaKnown RBP17.51■□□□□ 0.39
CYSTM1-201ENST00000261811 ITGAMP11215 1152 aa17.51■□□□□ 0.39
CYSTM1-201ENST00000261811 PORP16435 677 aaPredicted RBP17.51■□□□□ 0.39
CYSTM1-201ENST00000261811 XKP51811 444 aa17.51■□□□□ 0.39
CYSTM1-201ENST00000261811 PDCD2Q16342 344 aaPredicted RBP17.51■□□□□ 0.39
CYSTM1-201ENST00000261811 SMU1Q2TAY7 513 aa17.51■□□□□ 0.39
CYSTM1-201ENST00000261811 XKR7Q5GH72 579 aa17.51■□□□□ 0.39
CYSTM1-201ENST00000261811 CES4AQ5XG92 561 aa17.51■□□□□ 0.39
CYSTM1-201ENST00000261811 CRLF3Q8IUI8 442 aa17.51■□□□□ 0.39
CYSTM1-201ENST00000261811 OR2T11Q8NH01 316 aa17.51■□□□□ 0.39
CYSTM1-201ENST00000261811 RIT1Q92963 219 aa17.51■□□□□ 0.39
CYSTM1-201ENST00000261811 DEFB126Q9BYW3 111 aa17.51■□□□□ 0.39
CYSTM1-201ENST00000261811 C20orf27Q9GZN8 174 aa17.51■□□□□ 0.39
CYSTM1-201ENST00000261811 ZNF395Q9H8N7 513 aaPredicted RBP17.51■□□□□ 0.39
CYSTM1-201ENST00000261811 PTGFRNQ9P2B2 879 aa17.51■□□□□ 0.39
CYSTM1-201ENST00000261811 UTS2RQ9UKP6 389 aa17.51■□□□□ 0.39
CYSTM1-201ENST00000261811 ENTPD4Q9Y227 616 aa17.51■□□□□ 0.39
CYSTM1-201ENST00000261811 EIF3LQ9Y262 564 aaKnown RBP17.51■□□□□ 0.39
CYSTM1-201ENST00000261811 CLDN16Q9Y5I7 305 aa17.51■□□□□ 0.39
CYSTM1-201ENST00000261811 DYTNA2CJ06 578 aa17.5■□□□□ 0.39
CYSTM1-201ENST00000261811 PEX11AO75192 247 aa17.5■□□□□ 0.39
CYSTM1-201ENST00000261811 MFAP5Q13361 173 aa17.5■□□□□ 0.39
CYSTM1-201ENST00000261811 KIAA0040Q15053 153 aa17.5■□□□□ 0.39
CYSTM1-201ENST00000261811 MEP1AQ16819 746 aa17.5■□□□□ 0.39
CYSTM1-201ENST00000261811 RFTN2Q52LD8 501 aaPredicted RBP17.5■□□□□ 0.39
CYSTM1-201ENST00000261811 CNTRLQ7Z7A1 2325 aa17.5■□□□□ 0.39
CYSTM1-201ENST00000261811 SIRT6Q8N6T7 355 aa17.5■□□□□ 0.39
CYSTM1-201ENST00000261811 TEX19Q8NA77 164 aa17.5■□□□□ 0.39
CYSTM1-201ENST00000261811 FNDC5Q8NAU1 212 aa17.5■□□□□ 0.39
CYSTM1-201ENST00000261811 ELP5Q8TE02 316 aa17.5■□□□□ 0.39
CYSTM1-201ENST00000261811 PPIEQ9UNP9 301 aaKnown RBP17.5■□□□□ 0.39
CYSTM1-201ENST00000261811 ZFYVE26Q68DK2 2539 aa17.5■□□□□ 0.39
CYSTM1-201ENST00000261811 COL6A6A6NMZ7 2263 aa17.5■□□□□ 0.39
CYSTM1-201ENST00000261811 MYOCOSA0A1B0GUC4 107 aa17.49■□□□□ 0.39
CYSTM1-201ENST00000261811 ATP6AP2A0A1C7CYW4 349 aa17.49■□□□□ 0.39
CYSTM1-201ENST00000261811 CDK2AP1O14519 115 aa17.49■□□□□ 0.39
CYSTM1-201ENST00000261811 ATP6AP2O75787 350 aa17.49■□□□□ 0.39
CYSTM1-201ENST00000261811 PRPS2P11908 318 aa17.49■□□□□ 0.39
CYSTM1-201ENST00000261811 CPMP14384 443 aa17.49■□□□□ 0.39
CYSTM1-201ENST00000261811 PCSK2P16519 638 aa17.49■□□□□ 0.39
CYSTM1-201ENST00000261811 DDCP20711 480 aa17.49■□□□□ 0.39
CYSTM1-201ENST00000261811 RPL3P39023 403 aaKnown RBP17.49■□□□□ 0.39
CYSTM1-201ENST00000261811 C6orf136Q5SQH8 315 aa17.49■□□□□ 0.39
CYSTM1-201ENST00000261811 H3F3CQ6NXT2 135 aa17.49■□□□□ 0.39
CYSTM1-201ENST00000261811 IGFL3Q6UXB1 125 aa17.49■□□□□ 0.39
CYSTM1-201ENST00000261811 ATG14Q6ZNE5 492 aa17.49■□□□□ 0.39
CYSTM1-201ENST00000261811 LRRC34Q8IZ02 419 aa17.49■□□□□ 0.39
CYSTM1-201ENST00000261811 FAM9CQ8IZT9 166 aa17.49■□□□□ 0.39
CYSTM1-201ENST00000261811 LGI4Q8N135 537 aa17.49■□□□□ 0.39
CYSTM1-201ENST00000261811 NFAM1Q8NET5 270 aaPredicted RBP17.49■□□□□ 0.39
CYSTM1-201ENST00000261811 PIWIL2Q8TC59 973 aaKnown RBP17.49■□□□□ 0.39
CYSTM1-201ENST00000261811 PTPMT1Q8WUK0 201 aaPredicted RBP17.49■□□□□ 0.39
CYSTM1-201ENST00000261811 NCLNQ969V3 563 aa17.49■□□□□ 0.39
CYSTM1-201ENST00000261811 OR8D2Q9GZM6 311 aa17.49■□□□□ 0.39
CYSTM1-201ENST00000261811 PNPOQ9NVS9 261 aa17.49■□□□□ 0.39
CYSTM1-201ENST00000261811 STMN3Q9NZ72 180 aa17.49■□□□□ 0.39
CYSTM1-201ENST00000261811 CES1P1Q9UKY3 287 aa17.49■□□□□ 0.39
CYSTM1-201ENST00000261811 MAPRE3Q9UPY8 281 aa17.49■□□□□ 0.39
CYSTM1-201ENST00000261811 TRBV11-1A0A0K0K1C0 115 aa17.48■□□□□ 0.39
CYSTM1-201ENST00000261811 FCHO1O14526 889 aa17.48■□□□□ 0.39
CYSTM1-201ENST00000261811 HDAC3O15379 428 aa17.48■□□□□ 0.39
CYSTM1-201ENST00000261811 ZFAND5O76080 213 aa17.48■□□□□ 0.39
CYSTM1-201ENST00000261811 CELA2AP08217 269 aa17.48■□□□□ 0.39
CYSTM1-201ENST00000261811 MPIP34949 423 aa17.48■□□□□ 0.39
CYSTM1-201ENST00000261811 OCRLQ01968 901 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms