RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 CDCP2Q5VXM1 449 aa16.69■□□□□ 0.26
CCDC115-201ENST00000259229 PWWP2BQ6NUJ5 590 aa16.69■□□□□ 0.26
CCDC115-201ENST00000259229 CYB5D1Q6P9G0 228 aa16.69■□□□□ 0.26
CCDC115-201ENST00000259229 RBM44Q6ZP01 1051 aaKnown RBP16.69■□□□□ 0.26
CCDC115-201ENST00000259229 PTRH1Q86Y79 214 aaKnown RBP16.69■□□□□ 0.26
CCDC115-201ENST00000259229 CCDC116Q8IYX3 515 aa16.69■□□□□ 0.26
CCDC115-201ENST00000259229 OR51Q1Q8NH59 317 aa16.69■□□□□ 0.26
CCDC115-201ENST00000259229 OR10A6Q8NH74 314 aa16.69■□□□□ 0.26
CCDC115-201ENST00000259229 PNPT1Q8TCS8 783 aaKnown RBP16.69■□□□□ 0.26
CCDC115-201ENST00000259229 TANKQ92844 425 aa16.69■□□□□ 0.26
CCDC115-201ENST00000259229 RNF31Q96EP0 1072 aa16.69■□□□□ 0.26
CCDC115-201ENST00000259229 BBS4Q96RK4 519 aa16.69■□□□□ 0.26
CCDC115-201ENST00000259229 SH3GL1Q99961 368 aa16.69■□□□□ 0.26
CCDC115-201ENST00000259229 THUMPD3Q9BV44 507 aaKnown RBP16.69■□□□□ 0.26
CCDC115-201ENST00000259229 RARRES3Q9UL19 164 aa16.69■□□□□ 0.26
CCDC115-201ENST00000259229 PCDHGB4Q9UN71 923 aa16.69■□□□□ 0.26
CCDC115-201ENST00000259229 MGRN1O60291 552 aa16.68■□□□□ 0.26
CCDC115-201ENST00000259229 DNAJA2O60884 412 aa16.68■□□□□ 0.26
CCDC115-201ENST00000259229 BCAS2O75934 225 aaPredicted RBP16.68■□□□□ 0.26
CCDC115-201ENST00000259229 FGF5P12034 268 aa16.68■□□□□ 0.26
CCDC115-201ENST00000259229 UQCRC2P22695 453 aa16.68■□□□□ 0.26
CCDC115-201ENST00000259229 CSTF2P33240 577 aaKnown RBP eCLIP16.68■□□□□ 0.26
CCDC115-201ENST00000259229 CLDN6P56747 220 aa16.68■□□□□ 0.26
CCDC115-201ENST00000259229 ID2Q02363 134 aa16.68■□□□□ 0.26
CCDC115-201ENST00000259229 DSG2Q14126 1118 aa16.68■□□□□ 0.26
CCDC115-201ENST00000259229 LTB4RQ15722 352 aa16.68■□□□□ 0.26
CCDC115-201ENST00000259229 ZNF385CQ66K41 422 aaPredicted RBP16.68■□□□□ 0.26
CCDC115-201ENST00000259229 CPZQ66K79 652 aa16.68■□□□□ 0.26
CCDC115-201ENST00000259229 MED25Q71SY5 747 aa16.68■□□□□ 0.26
CCDC115-201ENST00000259229 GLRX5Q86SX6 157 aa16.68■□□□□ 0.26
CCDC115-201ENST00000259229 AGBL5Q8NDL9 886 aa16.68■□□□□ 0.26
CCDC115-201ENST00000259229 OR4K14Q8NGD5 310 aa16.68■□□□□ 0.26
CCDC115-201ENST00000259229 ADAMTS18Q8TE60 1221 aa16.68■□□□□ 0.26
CCDC115-201ENST00000259229 PHOX2BQ99453 314 aa16.68■□□□□ 0.26
CCDC115-201ENST00000259229 PIF1Q9H611 641 aa16.68■□□□□ 0.26
CCDC115-201ENST00000259229 SLC22A11Q9NSA0 550 aa16.68■□□□□ 0.26
CCDC115-201ENST00000259229 PSME2Q9UL46 239 aa16.68■□□□□ 0.26
CCDC115-201ENST00000259229 SRPK3Q9UPE1 567 aa16.68■□□□□ 0.26
CCDC115-201ENST00000259229 CLCA2Q9UQC9 943 aa16.68■□□□□ 0.26
CCDC115-201ENST00000259229 ZNF780BQ9Y6R6 833 aa16.68■□□□□ 0.26
CCDC115-201ENST00000259229 RNF103-CHMP3A0A140T963 221 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 JRKO75564 520 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 GPR75O95800 540 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 CCL4P13236 92 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 CPMP14384 443 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 ALAS2P22557 587 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 HTR1EP28566 365 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 SOAT1P35610 550 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 XKP51811 444 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 EFNA3P52797 238 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 ERV3-1Q14264 604 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 COX20Q5RI15 118 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 C1orf189Q5VU69 101 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 SAXO2Q658L1 398 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 COX15Q7KZN9 410 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 IFNEQ86WN2 208 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 LRRC25Q8N386 305 aaPredicted RBP16.67■□□□□ 0.26
CCDC115-201ENST00000259229 TRIML2Q8N7C3 387 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 OR9A2Q8NGT5 310 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 ZFP28Q8NHY6 868 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 PMEPA1Q969W9 287 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 KCTD14Q9BQ13 255 aaPredicted RBP16.67■□□□□ 0.26
CCDC115-201ENST00000259229 ECSITQ9BQ95 431 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 DPH2Q9BQC3 489 aaPredicted RBP16.67■□□□□ 0.26
CCDC115-201ENST00000259229 LANCL2Q9NS86 450 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 NDOR1Q9UHB4 597 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 EGFL7Q9UHF1 273 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 PCDHB3Q9Y5E6 796 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 PCDHGA1Q9Y5H4 931 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 KIF26BQ2KJY2 2108 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 FAM220BPB1ANY3 271 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 SCRG1O75711 98 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 NTRK1P04629 796 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 ATP6V1B2P21281 511 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 XCR1P46094 333 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 ERFP50548 548 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 IGLV3-21P80748 117 aaPredicted RBP16.67■□□□□ 0.26
CCDC115-201ENST00000259229 ABHD18Q0P651 414 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 TRAP1Q12931 704 aaKnown RBP16.67■□□□□ 0.26
CCDC115-201ENST00000259229 BNIP2Q12982 314 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 RGNQ15493 299 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 ADRM1Q16186 407 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 TMEM64Q6YI46 380 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 SERPINA11Q86U17 422 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 PPP1R3BQ86XI6 285 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 OR52N2Q8NGI0 321 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 TBC1D20Q96BZ9 403 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 NEURL3Q96EH8 262 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 FAM120BQ96EK7 910 aaKnown RBP16.67■□□□□ 0.26
CCDC115-201ENST00000259229 GIMAP4Q9NUV9 329 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 AP3M1Q9Y2T2 418 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 MAP4K5Q9Y4K4 846 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 SNX8Q9Y5X2 465 aa16.67■□□□□ 0.26
CCDC115-201ENST00000259229 MYOCOSA0A1B0GUC4 107 aa16.66■□□□□ 0.26
CCDC115-201ENST00000259229 OR2W5A6NFC9 320 aa16.66■□□□□ 0.26
CCDC115-201ENST00000259229 FOXD2O60548 495 aaPredicted RBP16.66■□□□□ 0.26
CCDC115-201ENST00000259229 CDC123O75794 336 aaPredicted RBP16.66■□□□□ 0.26
CCDC115-201ENST00000259229 DKK1O94907 266 aa16.66■□□□□ 0.26
CCDC115-201ENST00000259229 ATP1B1P05026 303 aa16.66■□□□□ 0.26
CCDC115-201ENST00000259229 FHP07954 510 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms