RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 SLC47A1Q96FL8 570 aa17.85■□□□□ 0.45
TRIM47-201ENST00000254816 ZNF764Q96H86 408 aaPredicted RBP17.85■□□□□ 0.45
TRIM47-201ENST00000254816 AMDHD1Q96NU7 426 aa17.85■□□□□ 0.45
TRIM47-201ENST00000254816 BBS4Q96RK4 519 aa17.85■□□□□ 0.45
TRIM47-201ENST00000254816 CSF3RQ99062 836 aa17.85■□□□□ 0.45
TRIM47-201ENST00000254816 EPS8L2Q9H6S3 715 aa17.85■□□□□ 0.45
TRIM47-201ENST00000254816 ERVMER34-1Q9H9K5 563 aa17.85■□□□□ 0.45
TRIM47-201ENST00000254816 LYARQ9NX58 379 aaKnown RBP17.85■□□□□ 0.45
TRIM47-201ENST00000254816 EHD3Q9NZN3 535 aa17.85■□□□□ 0.45
TRIM47-201ENST00000254816 CES1P1Q9UKY3 287 aa17.85■□□□□ 0.45
TRIM47-201ENST00000254816 ZDBF2Q9HCK1 2354 aa17.85■□□□□ 0.45
TRIM47-201ENST00000254816 ALOX12P18054 663 aa17.84■□□□□ 0.45
TRIM47-201ENST00000254816 OR1D5P58170 312 aa17.84■□□□□ 0.45
TRIM47-201ENST00000254816 CHRNB3Q05901 458 aa17.84■□□□□ 0.45
TRIM47-201ENST00000254816 SLC36A3Q495N2 470 aa17.84■□□□□ 0.45
TRIM47-201ENST00000254816 TMEM214Q6NUQ4 689 aaKnown RBP17.84■□□□□ 0.45
TRIM47-201ENST00000254816 SLC48A1Q6P1K1 146 aa17.84■□□□□ 0.45
TRIM47-201ENST00000254816 ERICH5Q6P6B1 374 aa17.84■□□□□ 0.45
TRIM47-201ENST00000254816 GATAD2AQ86YP4 633 aa17.84■□□□□ 0.45
TRIM47-201ENST00000254816 SLC35F3Q8IY50 421 aa17.84■□□□□ 0.45
TRIM47-201ENST00000254816 CCDC116Q8IYX3 515 aa17.84■□□□□ 0.45
TRIM47-201ENST00000254816 NATD1Q8N6N6 113 aa17.84■□□□□ 0.45
TRIM47-201ENST00000254816 TMEM105Q8N8V8 129 aa17.84■□□□□ 0.45
TRIM47-201ENST00000254816 PIGKQ92643 395 aa17.84■□□□□ 0.45
TRIM47-201ENST00000254816 SERINC2Q96SA4 455 aa17.84■□□□□ 0.45
TRIM47-201ENST00000254816 UGT2B28Q9BY64 529 aa17.84■□□□□ 0.45
TRIM47-201ENST00000254816 CLK4Q9HAZ1 481 aaKnown RBP17.84■□□□□ 0.45
TRIM47-201ENST00000254816 VCX3AQ9NNX9 186 aa17.84■□□□□ 0.45
TRIM47-201ENST00000254816 PILRBQ9UKJ0 227 aa17.84■□□□□ 0.45
TRIM47-201ENST00000254816 TNFRSF21O75509 655 aa17.84■□□□□ 0.45
TRIM47-201ENST00000254816 ZNF682O95780 498 aa17.84■□□□□ 0.45
TRIM47-201ENST00000254816 RAP2AP10114 183 aa17.84■□□□□ 0.45
TRIM47-201ENST00000254816 DDX5P17844 614 aaKnown RBP17.84■□□□□ 0.45
TRIM47-201ENST00000254816 CPN2P22792 545 aa17.84■□□□□ 0.45
TRIM47-201ENST00000254816 MYF6P23409 242 aa17.84■□□□□ 0.45
TRIM47-201ENST00000254816 GPC1P35052 558 aa17.84■□□□□ 0.45
TRIM47-201ENST00000254816 LIM2P55344 173 aa17.84■□□□□ 0.45
TRIM47-201ENST00000254816 SPDYE7PQ495Y7 208 aa17.84■□□□□ 0.45
TRIM47-201ENST00000254816 TTC33Q6PID6 262 aaPredicted RBP17.84■□□□□ 0.45
TRIM47-201ENST00000254816 OR5T3Q8NGG3 340 aa17.84■□□□□ 0.45
TRIM47-201ENST00000254816 OR52E4Q8NGH9 312 aa17.84■□□□□ 0.45
TRIM47-201ENST00000254816 MAGED4Q96JG8 741 aa17.84■□□□□ 0.45
TRIM47-201ENST00000254816 ACSS1Q9NUB1 689 aaPredicted RBP17.84■□□□□ 0.45
TRIM47-201ENST00000254816 KCMF1Q9P0J7 381 aa17.84■□□□□ 0.45
TRIM47-201ENST00000254816 UNC13CQ8NB66 2214 aa17.83■□□□□ 0.45
TRIM47-201ENST00000254816 ZSCAN9O15535 394 aaPredicted RBP17.83■□□□□ 0.45
TRIM47-201ENST00000254816 B3GALT2O43825 422 aa17.83■□□□□ 0.45
TRIM47-201ENST00000254816 SNAP29O95721 258 aa17.83■□□□□ 0.45
TRIM47-201ENST00000254816 NR2F6P10588 404 aa17.83■□□□□ 0.45
TRIM47-201ENST00000254816 KDELR2P33947 212 aa17.83■□□□□ 0.45
TRIM47-201ENST00000254816 OTUD3Q5T2D3 398 aaPredicted RBP17.83■□□□□ 0.45
TRIM47-201ENST00000254816 SZRD1Q7Z422 152 aa17.83■□□□□ 0.45
TRIM47-201ENST00000254816 MCATQ8IVS2 390 aaKnown RBP17.83■□□□□ 0.45
TRIM47-201ENST00000254816 ZNF655Q8N720 491 aaPredicted RBP17.83■□□□□ 0.45
TRIM47-201ENST00000254816 SUN3Q8TAQ9 357 aa17.83■□□□□ 0.45
TRIM47-201ENST00000254816 NEUROD4Q9HD90 331 aa17.83■□□□□ 0.45
TRIM47-201ENST00000254816 C1GALT1Q9NS00 363 aa17.83■□□□□ 0.45
TRIM47-201ENST00000254816 NAALAD2Q9Y3Q0 740 aa17.83■□□□□ 0.45
TRIM47-201ENST00000254816 RP1P56715 2156 aa17.83■□□□□ 0.45
TRIM47-201ENST00000254816 IGHV5-51A0A0C4DH38 117 aa17.83■□□□□ 0.44
TRIM47-201ENST00000254816 KRT75O95678 551 aa17.83■□□□□ 0.44
TRIM47-201ENST00000254816 NTSP30990 170 aa17.83■□□□□ 0.44
TRIM47-201ENST00000254816 GCNT6Q5T4J0 391 aa17.83■□□□□ 0.44
TRIM47-201ENST00000254816 SAXO2Q658L1 398 aa17.83■□□□□ 0.44
TRIM47-201ENST00000254816 B3GNT6Q6ZMB0 384 aa17.83■□□□□ 0.44
TRIM47-201ENST00000254816 SMPD3Q9NY59 655 aaPredicted RBP17.83■□□□□ 0.44
TRIM47-201ENST00000254816 PTTG2Q9NZH5 202 aa17.83■□□□□ 0.44
TRIM47-201ENST00000254816 DAPP1Q9UN19 280 aa17.83■□□□□ 0.44
TRIM47-201ENST00000254816 CEPT1Q9Y6K0 416 aa17.83■□□□□ 0.44
TRIM47-201ENST00000254816 CLOCKO15516 846 aa17.82■□□□□ 0.44
TRIM47-201ENST00000254816 ARRB1P49407 418 aaPredicted RBP17.82■□□□□ 0.44
TRIM47-201ENST00000254816 TNFRSF17Q02223 184 aa17.82■□□□□ 0.44
TRIM47-201ENST00000254816 TP53BP2Q13625 1128 aa17.82■□□□□ 0.44
TRIM47-201ENST00000254816 SIM2Q14190 667 aaPredicted RBP17.82■□□□□ 0.44
TRIM47-201ENST00000254816 AMZ1Q400G9 498 aa17.82■□□□□ 0.44
TRIM47-201ENST00000254816 TNFAIP8L2Q6P589 184 aaPredicted RBP17.82■□□□□ 0.44
TRIM47-201ENST00000254816 C6orf120Q7Z4R8 191 aa17.82■□□□□ 0.44
TRIM47-201ENST00000254816 ARL10Q8N8L6 244 aa17.82■□□□□ 0.44
TRIM47-201ENST00000254816 Q8N9G6 341 aaPredicted RBP17.82■□□□□ 0.44
TRIM47-201ENST00000254816 C11orf65Q8NCR3 313 aa17.82■□□□□ 0.44
TRIM47-201ENST00000254816 NFKBIDQ8NI38 313 aa17.82■□□□□ 0.44
TRIM47-201ENST00000254816 SPATA9Q9BWV2 254 aa17.82■□□□□ 0.44
TRIM47-201ENST00000254816 ROGDIQ9GZN7 287 aa17.82■□□□□ 0.44
TRIM47-201ENST00000254816 NTN4Q9HB63 628 aa17.82■□□□□ 0.44
TRIM47-201ENST00000254816 ENTPD4Q9Y227 616 aa17.82■□□□□ 0.44
TRIM47-201ENST00000254816 MAGED1Q9Y5V3 778 aaPredicted RBP17.82■□□□□ 0.44
TRIM47-201ENST00000254816 A0A0C4DFX4 3053 aa17.82■□□□□ 0.44
TRIM47-201ENST00000254816 TMEM221A6NGB7 291 aa17.82■□□□□ 0.44
TRIM47-201ENST00000254816 MYO1GB0I1T2 1018 aa17.82■□□□□ 0.44
TRIM47-201ENST00000254816 M0R296 226 aa17.82■□□□□ 0.44
TRIM47-201ENST00000254816 GCM2O75603 506 aaPredicted RBP17.82■□□□□ 0.44
TRIM47-201ENST00000254816 CCT3P49368 545 aaKnown RBP17.82■□□□□ 0.44
TRIM47-201ENST00000254816 PRIM2P49643 509 aa17.82■□□□□ 0.44
TRIM47-201ENST00000254816 CRYBA2P53672 197 aa17.82■□□□□ 0.44
TRIM47-201ENST00000254816 SIM1P81133 766 aaPredicted RBP17.82■□□□□ 0.44
TRIM47-201ENST00000254816 FADDQ13158 208 aa17.82■□□□□ 0.44
TRIM47-201ENST00000254816 VEZF1Q14119 521 aa17.82■□□□□ 0.44
TRIM47-201ENST00000254816 MLC1Q15049 377 aa17.82■□□□□ 0.44
TRIM47-201ENST00000254816 CYBRD1Q53TN4 286 aa17.82■□□□□ 0.44
TRIM47-201ENST00000254816 ZC3H7AQ8IWR0 971 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms