RNA–Protein interactions for RNA: ENST00000239849.8

TNFSF11-201, Transcript of TNF superfamily member 11, humanhuman

TSL 5 BASIC

Gene TNFSF11, Length 911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-201ENST00000239849 CASC4Q6P4E1 433 aa11.74□□□□□ -0.53
TNFSF11-201ENST00000239849 ZNF550Q7Z398 422 aa11.74□□□□□ -0.53
TNFSF11-201ENST00000239849 PEX26Q7Z412 305 aa11.74□□□□□ -0.53
TNFSF11-201ENST00000239849 CILP2Q8IUL8 1156 aa11.74□□□□□ -0.53
TNFSF11-201ENST00000239849 SYCE1Q8N0S2 351 aa11.74□□□□□ -0.53
TNFSF11-201ENST00000239849 OR10G3Q8NGC4 313 aa11.74□□□□□ -0.53
TNFSF11-201ENST00000239849 AKAP1Q92667 903 aaKnown RBP eCLIP11.74□□□□□ -0.53
TNFSF11-201ENST00000239849 ALG3Q92685 438 aa11.74□□□□□ -0.53
TNFSF11-201ENST00000239849 FBXW5Q969U6 566 aa11.74□□□□□ -0.53
TNFSF11-201ENST00000239849 GAL3ST3Q96A11 431 aa11.74□□□□□ -0.53
TNFSF11-201ENST00000239849 DTNBP1Q96EV8 351 aa11.74□□□□□ -0.53
TNFSF11-201ENST00000239849 PGM2Q96G03 612 aa11.74□□□□□ -0.53
TNFSF11-201ENST00000239849 TMEM204Q9BSN7 226 aa11.74□□□□□ -0.53
TNFSF11-201ENST00000239849 IL22Q9GZX6 179 aa11.74□□□□□ -0.53
TNFSF11-201ENST00000239849 FANCFQ9NPI8 374 aa11.74□□□□□ -0.53
TNFSF11-201ENST00000239849 CHRAC1Q9NRG0 131 aa11.74□□□□□ -0.53
TNFSF11-201ENST00000239849 RAB6BQ9NRW1 208 aa11.74□□□□□ -0.53
TNFSF11-201ENST00000239849 CLCF1Q9UBD9 225 aa11.74□□□□□ -0.53
TNFSF11-201ENST00000239849 KCNS2Q9ULS6 477 aa11.74□□□□□ -0.53
TNFSF11-201ENST00000239849 TFR2Q9UP52 801 aa11.74□□□□□ -0.53
TNFSF11-201ENST00000239849 CRYL1Q9Y2S2 319 aa11.74□□□□□ -0.53
TNFSF11-201ENST00000239849 SCN3AQ9NY46 2000 aa11.74□□□□□ -0.53
TNFSF11-201ENST00000239849 BTNL10A8MVZ5 291 aa11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 MIF4GDA9UHW6 222 aaKnown RBP11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 ABCB7O75027 752 aa11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 HIST1H2AGP0C0S8 130 aaPredicted RBP11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 HIST1H2ADP20671 130 aa11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 SAT1P21673 171 aa11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 TBXA2RP21731 343 aa11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 CCKARP32238 428 aa11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 NAGLUP54802 743 aa11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 SESN2P58004 480 aaPredicted RBP11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 CSHL1Q14406 222 aa11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 LYPD8Q6UX82 237 aa11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 P4HA3Q7Z4N8 544 aa11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 CLNKQ7Z7G1 428 aa11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 SPNS2Q8IVW8 549 aa11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 TAGAPQ8N103 731 aa11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 ZNF321PQ8N8H1 164 aa11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 CNEP1R1Q8N9A8 125 aa11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 FAM47BQ8NA70 645 aa11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 SLC35B2Q8TB61 432 aa11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 KCNJ9Q92806 393 aa11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 STARD4Q96DR4 205 aa11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 SNF8Q96H20 258 aa11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 HIST1H2AHQ96KK5 128 aa11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 HIST1H2AJQ99878 128 aa11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 H2AFJQ9BTM1 129 aa11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 FRMD8P1Q9BZ68 369 aaPredicted RBP11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 CCDC68Q9H2F9 335 aa11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 BFARQ9NZS9 450 aa11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 PAK5Q9P286 719 aa11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 LIPT1Q9Y234 373 aa11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 WIF1Q9Y5W5 379 aa11.73□□□□□ -0.53
TNFSF11-201ENST00000239849 ABCA1O95477 2261 aa11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 KLF4O43474 513 aa11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 IGHV4-39P01824 125 aa11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 C8GP07360 202 aa11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 CD8BP10966 210 aa11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 SLC25A16P16260 332 aa11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 OGNP20774 298 aaKnown RBP11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 GMPRP36959 345 aa11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 GRIA1P42261 906 aa11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 TMED10P49755 219 aaKnown RBP11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 BIKQ13323 160 aa11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 SP140Q13342 867 aa11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 KLF1Q13351 362 aaPredicted RBP11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 RPS6KA2Q15349 733 aa11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 EIPR1Q53HC9 387 aa11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 TOR1AIP1Q5JTV8 583 aa11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 ZNF474Q6S9Z5 364 aaPredicted RBP11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 CLEC2AQ6UVW9 174 aa11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 SLC29A4Q7RTT9 530 aa11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 ZNF721Q8TF20 911 aa11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 PLPPR2Q96GM1 343 aa11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 TMEM41AQ96HV5 264 aa11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 RILPQ96NA2 401 aa11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 GNRHR2Q96P88 292 aa11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 AIF1LQ9BQI0 150 aa11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 C12orf65Q9H3J6 166 aaKnown RBP11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 ALG2Q9H553 416 aa11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 TREX1Q9NSU2 369 aa11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 INTS10Q9NVR2 710 aaKnown RBP11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 GALPQ9UBC7 116 aa11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 RNF112Q9ULX5 631 aa11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 DLGAP4Q9Y2H0 992 aa11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 MAD1L1Q9Y6D9 718 aa11.72□□□□□ -0.53
TNFSF11-201ENST00000239849 OR10H2O60403 315 aa11.71□□□□□ -0.53
TNFSF11-201ENST00000239849 VAPBO95292 243 aa11.71□□□□□ -0.53
TNFSF11-201ENST00000239849 THBS1P07996 1170 aa11.71□□□□□ -0.53
TNFSF11-201ENST00000239849 GSTM2P28161 218 aa11.71□□□□□ -0.53
TNFSF11-201ENST00000239849 RPL22P35268 128 aaKnown RBP11.71□□□□□ -0.53
TNFSF11-201ENST00000239849 CDKN1AP38936 164 aa11.71□□□□□ -0.53
TNFSF11-201ENST00000239849 HNRNPFP52597 415 aaKnown RBP11.71□□□□□ -0.53
TNFSF11-201ENST00000239849 SRYQ05066 204 aa11.71□□□□□ -0.53
TNFSF11-201ENST00000239849 CUL1Q13616 776 aa11.71□□□□□ -0.53
TNFSF11-201ENST00000239849 RUNX2Q13950 521 aa11.71□□□□□ -0.53
TNFSF11-201ENST00000239849 SEL1L2Q5TEA6 688 aa11.71□□□□□ -0.53
TNFSF11-201ENST00000239849 DUPD1Q68J44 220 aa11.71□□□□□ -0.53
TNFSF11-201ENST00000239849 FAM166AQ6J272 317 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms