RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 GARNL3Q5VVW2 1013 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 FCRL6Q6DN72 434 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 FBXO42Q6P3S6 717 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 CYP2R1Q6VVX0 501 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 ANKRD46Q86W74 232 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 ADGRG5Q8IZF4 528 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 ARL10Q8N8L6 244 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 ANKFN1Q8N957 763 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 OR10G6Q8NH81 332 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 FGF11Q92914 225 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 MIEF2Q96C03 454 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 CENPNQ96H22 339 aaPredicted RBP12.48□□□□□ -0.41
SLIRP-201ENST00000238688 DEPDC7Q96QD5 511 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 TEFMQ96QE5 360 aaKnown RBP12.48□□□□□ -0.41
SLIRP-201ENST00000238688 SLC38A3Q99624 504 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 INPP5KQ9BT40 448 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 BDH2Q9BUT1 245 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 Q9H521 79 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 ASCL3Q9NQ33 180 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 AGPAT4Q9NRZ5 378 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 SEMA3GQ9NS98 782 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 DCAF13Q9NV06 445 aaKnown RBP12.48□□□□□ -0.41
SLIRP-201ENST00000238688 EGFL7Q9UHF1 273 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 ASB4Q9Y574 426 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 PRAMEF33A0A0G2JMD5 474 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 SAP18O00422 153 aaKnown RBP12.47□□□□□ -0.41
SLIRP-201ENST00000238688 NTN3O00634 580 aaPredicted RBP12.47□□□□□ -0.41
SLIRP-201ENST00000238688 TMPRSS11DO60235 418 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 DPM1O60762 260 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 CREG1O75629 220 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 DXOO77932 396 aaKnown RBP12.47□□□□□ -0.41
SLIRP-201ENST00000238688 BMP10O95393 424 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 SERPIND1P05546 499 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 MSL3P1P0C860 447 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 ALOX12P18054 663 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 PCGF2P35227 344 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 MSX2P35548 267 aaPredicted RBP12.47□□□□□ -0.41
SLIRP-201ENST00000238688 CDKN2CP42773 168 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 LSSP48449 732 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 MAPK10P53779 464 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 PLA2G16P53816 162 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 MANFP55145 182 aaKnown RBP12.47□□□□□ -0.41
SLIRP-201ENST00000238688 HBA1P69905 142 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 SELPLGQ14242 412 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 GK3PQ14409 553 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 RGNQ15493 299 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 CLPPQ16740 277 aaPredicted RBP12.47□□□□□ -0.41
SLIRP-201ENST00000238688 NDUFA9Q16795 377 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 TCTE1Q5JU00 501 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 TBCELQ5QJ74 424 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 SWT1Q5T5J6 900 aaKnown RBP12.47□□□□□ -0.41
SLIRP-201ENST00000238688 OR52E8Q6IFG1 317 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 DNAJC14Q6Y2X3 702 aaPredicted RBP12.47□□□□□ -0.41
SLIRP-201ENST00000238688 KMT5CQ86Y97 462 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 SPPL2CQ8IUH8 684 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 TMEM102Q8N9M5 508 aaPredicted RBP12.47□□□□□ -0.41
SLIRP-201ENST00000238688 UTP15Q8TED0 518 aaKnown RBP12.47□□□□□ -0.41
SLIRP-201ENST00000238688 CANT1Q8WVQ1 401 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 FAM162AQ96A26 154 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 TBC1D20Q96BZ9 403 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 NEURL3Q96EH8 262 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 DPYSL5Q9BPU6 564 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 SLC35A5Q9BS91 424 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 CHST8Q9H2A9 424 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 PRORYQ9H606 182 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 RPF2Q9H7B2 306 aaKnown RBP12.47□□□□□ -0.41
SLIRP-201ENST00000238688 SLC35C2Q9NQQ7 365 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 SEMA5BQ9P283 1151 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 PADI4Q9UM07 663 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 ENTPD4Q9Y227 616 aa12.47□□□□□ -0.41
SLIRP-201ENST00000238688 A0A1W2PQM1 296 aa12.46□□□□□ -0.41
SLIRP-201ENST00000238688 SYNDIG1LA6NDD5 238 aa12.46□□□□□ -0.41
SLIRP-201ENST00000238688 RHPN2P1A8MT19 583 aa12.46□□□□□ -0.41
SLIRP-201ENST00000238688 TOX3O15405 576 aaPredicted RBP12.46□□□□□ -0.41
SLIRP-201ENST00000238688 PROM1O43490 865 aa12.46□□□□□ -0.41
SLIRP-201ENST00000238688 SH3BGRLO75368 114 aa12.46□□□□□ -0.41
SLIRP-201ENST00000238688 CPSF4O95639 269 aaKnown RBP12.46□□□□□ -0.41
SLIRP-201ENST00000238688 NR2F6P10588 404 aa12.46□□□□□ -0.41
SLIRP-201ENST00000238688 GLB1P16278 677 aa12.46□□□□□ -0.41
SLIRP-201ENST00000238688 CDH3P22223 829 aa12.46□□□□□ -0.41
SLIRP-201ENST00000238688 PPP2R1BP30154 601 aa12.46□□□□□ -0.41
SLIRP-201ENST00000238688 MPIP34949 423 aa12.46□□□□□ -0.41
SLIRP-201ENST00000238688 GABREP78334 506 aa12.46□□□□□ -0.41
SLIRP-201ENST00000238688 SLAMF1Q13291 335 aa12.46□□□□□ -0.41
SLIRP-201ENST00000238688 BIKQ13323 160 aa12.46□□□□□ -0.41
SLIRP-201ENST00000238688 GNA13Q14344 377 aa12.46□□□□□ -0.41
SLIRP-201ENST00000238688 ATP6AP1Q15904 470 aa12.46□□□□□ -0.41
SLIRP-201ENST00000238688 ZNF385BQ569K4 471 aa12.46□□□□□ -0.41
SLIRP-201ENST00000238688 TMTC4Q5T4D3 741 aa12.46□□□□□ -0.41
SLIRP-201ENST00000238688 TMEM214Q6NUQ4 689 aaKnown RBP12.46□□□□□ -0.41
SLIRP-201ENST00000238688 SLC48A1Q6P1K1 146 aa12.46□□□□□ -0.41
SLIRP-201ENST00000238688 ZNF793Q6ZN11 406 aa12.46□□□□□ -0.41
SLIRP-201ENST00000238688 CLECL1Q8IZS7 167 aa12.46□□□□□ -0.41
SLIRP-201ENST00000238688 C19orf47Q8N9M1 422 aaKnown RBP12.46□□□□□ -0.41
SLIRP-201ENST00000238688 ICA1LQ8NDH6 482 aa12.46□□□□□ -0.41
SLIRP-201ENST00000238688 NRG4Q8WWG1 115 aa12.46□□□□□ -0.41
SLIRP-201ENST00000238688 PATE1Q8WXA2 126 aa12.46□□□□□ -0.41
SLIRP-201ENST00000238688 SLCO4A1Q96BD0 722 aa12.46□□□□□ -0.41
SLIRP-201ENST00000238688 PPWD1Q96BP3 646 aaKnown RBP12.46□□□□□ -0.41
SLIRP-201ENST00000238688 ZNF285Q96NJ3 590 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms