RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 LAMP1P11279 417 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 RNH1P13489 461 aaKnown RBP11.01□□□□□ -0.65
NOD1-201ENST00000222823 PGAM2P15259 253 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 FAM189BP81408 668 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 EXOC3L2Q2M3D2 409 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 LCN8Q6JVE9 175 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 SPATC1Q76KD6 591 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 A0A1B0GVT2 93 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 FEZF1A0PJY2 475 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 FAM221BA6H8Z2 402 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 NPIPB15A6NHN6 443 aaPredicted RBP11.01□□□□□ -0.65
NOD1-201ENST00000222823 ZNF208O43345 1280 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 ADRB3P13945 408 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 C5AR1P21730 350 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 EIF1AXP47813 144 aaKnown RBP11.01□□□□□ -0.65
NOD1-201ENST00000222823 ENTPD1P49961 510 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 ADAM15Q13444 863 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 ODF4Q2M2E3 257 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 OR52E8Q6IFG1 317 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 LETMD1Q6P1Q0 360 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 HMGN2P46Q86SG4 172 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 OR2T33Q8NG76 320 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 OR8K5Q8NH50 307 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 ZNF675Q8TD23 568 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 SLC17A9Q9BYT1 436 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 PDE7BQ9NP56 450 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 TREX1Q9NSU2 369 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 A0A0U1RQS6 177 aa11□□□□□ -0.65
NOD1-201ENST00000222823 APOL3O95236 402 aa11□□□□□ -0.65
NOD1-201ENST00000222823 HTR1AP08908 422 aa11□□□□□ -0.65
NOD1-201ENST00000222823 RHCEP18577 417 aa11□□□□□ -0.65
NOD1-201ENST00000222823 CBLP22681 906 aa11□□□□□ -0.65
NOD1-201ENST00000222823 GADD45AP24522 165 aa11□□□□□ -0.65
NOD1-201ENST00000222823 ZNF234Q14588 700 aa11□□□□□ -0.65
NOD1-201ENST00000222823 NNATQ16517 81 aa11□□□□□ -0.65
NOD1-201ENST00000222823 ZNF542PQ5EBM4 170 aa11□□□□□ -0.65
NOD1-201ENST00000222823 COMMD6Q7Z4G1 85 aa11□□□□□ -0.65
NOD1-201ENST00000222823 TMEM17Q86X19 198 aa11□□□□□ -0.65
NOD1-201ENST00000222823 GATSQ8NAP1 163 aa11□□□□□ -0.65
NOD1-201ENST00000222823 GRPEL2Q8TAA5 225 aa11□□□□□ -0.65
NOD1-201ENST00000222823 NSMAFQ92636 917 aa11□□□□□ -0.65
NOD1-201ENST00000222823 ISOC1Q96CN7 298 aa11□□□□□ -0.65
NOD1-201ENST00000222823 FEVQ99581 238 aa11□□□□□ -0.65
NOD1-201ENST00000222823 GSTO2Q9H4Y5 243 aa11□□□□□ -0.65
NOD1-201ENST00000222823 EIF3KQ9UBQ5 218 aaKnown RBP11□□□□□ -0.65
NOD1-201ENST00000222823 OR1A2Q9Y585 309 aa11□□□□□ -0.65
NOD1-201ENST00000222823 MAGEA12P43365 314 aa11□□□□□ -0.65
NOD1-201ENST00000222823 PDX1P52945 283 aa11□□□□□ -0.65
NOD1-201ENST00000222823 MLLT10P55197 1068 aa11□□□□□ -0.65
NOD1-201ENST00000222823 KLHL26Q53HC5 615 aa11□□□□□ -0.65
NOD1-201ENST00000222823 IER5LQ5T953 404 aa11□□□□□ -0.65
NOD1-201ENST00000222823 MANEALQ5VSG8 457 aa11□□□□□ -0.65
NOD1-201ENST00000222823 ZNF551Q7Z340 670 aaPredicted RBP11□□□□□ -0.65
NOD1-201ENST00000222823 SLC22A16Q86VW1 577 aa11□□□□□ -0.65
NOD1-201ENST00000222823 LRRC25Q8N386 305 aaPredicted RBP11□□□□□ -0.65
NOD1-201ENST00000222823 CSNK1A1LQ8N752 337 aa11□□□□□ -0.65
NOD1-201ENST00000222823 ACVR1CQ8NER5 493 aa11□□□□□ -0.65
NOD1-201ENST00000222823 GPR150Q8NGU9 434 aa11□□□□□ -0.65
NOD1-201ENST00000222823 SUN3Q8TAQ9 357 aa11□□□□□ -0.65
NOD1-201ENST00000222823 CCDC107Q8WV48 283 aa11□□□□□ -0.65
NOD1-201ENST00000222823 POLDIP3Q9BY77 421 aaKnown RBP11□□□□□ -0.65
NOD1-201ENST00000222823 MMP27Q9H306 513 aa11□□□□□ -0.65
NOD1-201ENST00000222823 RNF121Q9H920 327 aa11□□□□□ -0.65
NOD1-201ENST00000222823 ARNT2Q9HBZ2 717 aa11□□□□□ -0.65
NOD1-201ENST00000222823 H3BSH0 61 aa11□□□□□ -0.65
NOD1-201ENST00000222823 CSTBP04080 98 aaKnown RBP11□□□□□ -0.65
NOD1-201ENST00000222823 RLN2P04090 185 aa11□□□□□ -0.65
NOD1-201ENST00000222823 CKMT1AP12532 417 aa11□□□□□ -0.65
NOD1-201ENST00000222823 JUNDP17535 347 aa11□□□□□ -0.65
NOD1-201ENST00000222823 RPS3P23396 243 aaKnown RBP eCLIP11□□□□□ -0.65
NOD1-201ENST00000222823 GCGRP47871 477 aa11□□□□□ -0.65
NOD1-201ENST00000222823 CRISP1P54107 249 aa11□□□□□ -0.65
NOD1-201ENST00000222823 TMBIM6P55061 237 aa11□□□□□ -0.65
NOD1-201ENST00000222823 PIGFQ07326 219 aa11□□□□□ -0.65
NOD1-201ENST00000222823 RAB39AQ14964 217 aa11□□□□□ -0.65
NOD1-201ENST00000222823 FAM189A2Q15884 450 aa11□□□□□ -0.65
NOD1-201ENST00000222823 UNC5DQ6UXZ4 953 aa11□□□□□ -0.65
NOD1-201ENST00000222823 MAVSQ7Z434 540 aa11□□□□□ -0.65
NOD1-201ENST00000222823 VTCN1Q7Z7D3 282 aa11□□□□□ -0.65
NOD1-201ENST00000222823 GALNT12Q8IXK2 581 aa11□□□□□ -0.65
NOD1-201ENST00000222823 OR7G3Q8NG95 312 aa11□□□□□ -0.65
NOD1-201ENST00000222823 OR52P1PQ8NH57 321 aa11□□□□□ -0.65
NOD1-201ENST00000222823 SHKBP1Q8TBC3 707 aa11□□□□□ -0.65
NOD1-201ENST00000222823 SETD6Q8TBK2 473 aa11□□□□□ -0.65
NOD1-201ENST00000222823 RHBDF1Q96CC6 855 aa11□□□□□ -0.65
NOD1-201ENST00000222823 ERMAPQ96PL5 475 aaPredicted RBP11□□□□□ -0.65
NOD1-201ENST00000222823 SECISBP2Q96T21 854 aaKnown RBP11□□□□□ -0.65
NOD1-201ENST00000222823 MGLLQ99685 303 aa11□□□□□ -0.65
NOD1-201ENST00000222823 TUBA1CQ9BQE3 449 aa11□□□□□ -0.65
NOD1-201ENST00000222823 GPRC5BQ9NZH0 403 aa11□□□□□ -0.65
NOD1-201ENST00000222823 STOX2Q9P2F5 926 aaPredicted RBP11□□□□□ -0.65
NOD1-201ENST00000222823 SLC35F4A4IF30 521 aa10.99□□□□□ -0.65
NOD1-201ENST00000222823 C5orf51A6NDU8 294 aa10.99□□□□□ -0.65
NOD1-201ENST00000222823 WASH4PA8MWX3 477 aa10.99□□□□□ -0.65
NOD1-201ENST00000222823 DNAJB5O75953 348 aa10.99□□□□□ -0.65
NOD1-201ENST00000222823 MT-ND2P03891 347 aa10.99□□□□□ -0.65
NOD1-201ENST00000222823 DCKP27707 260 aa10.99□□□□□ -0.65
NOD1-201ENST00000222823 HLCSP50747 726 aa10.99□□□□□ -0.65
NOD1-201ENST00000222823 UAP1L1Q3KQV9 507 aa10.99□□□□□ -0.65
NOD1-201ENST00000222823 UGT3A2Q3SY77 523 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms