RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 C4orf46Q504U0 113 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 TPRG1LQ5T0D9 272 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 METRNLQ641Q3 311 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 NIPAL1Q6NVV3 410 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 MEX3DQ86XN8 651 aaKnown RBP9.47□□□□□ -0.89
USP11-201ENST00000218348 DEFB119Q8N690 84 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 OR5D16Q8NGK9 328 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 OR8K5Q8NH50 307 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 OR10G6Q8NH81 332 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 OR5K2Q8NHB8 316 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 C12orf43Q96C57 262 aaKnown RBP9.47□□□□□ -0.89
USP11-201ENST00000218348 C11orf24Q96F05 449 aaPredicted RBP9.47□□□□□ -0.89
USP11-201ENST00000218348 RBM4BQ9BQ04 359 aaKnown RBP9.47□□□□□ -0.89
USP11-201ENST00000218348 AIF1LQ9BQI0 150 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 RBM4Q9BWF3 364 aaKnown RBP9.47□□□□□ -0.89
USP11-201ENST00000218348 NPLQ9BXD5 320 aaPredicted RBP9.47□□□□□ -0.89
USP11-201ENST00000218348 HDAC8Q9BY41 377 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 DPEP2Q9H4A9 486 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 CXorf36Q9H7Y0 433 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 EQTNQ9NQ60 294 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 RLIMQ9NVW2 624 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 THUMPD1Q9NXG2 353 aaKnown RBP9.47□□□□□ -0.89
USP11-201ENST00000218348 TMEFF2Q9UIK5 374 aaPredicted RBP9.47□□□□□ -0.89
USP11-201ENST00000218348 IFT52Q9Y366 437 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 SEC16AO15027 2179 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 PRPH2P23942 346 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 IGFALSP35858 605 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 MAP2K4P45985 399 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 IDH2P48735 452 aaKnown RBP9.47□□□□□ -0.89
USP11-201ENST00000218348 SNTA1Q13424 505 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 SCARB2Q14108 478 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 DPY19L1Q2PZI1 675 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 SERPINA11Q86U17 422 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 SLC9B2Q86UD5 537 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 TMEFF1Q8IYR6 380 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 FBXL6Q8N531 539 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 C11orf65Q8NCR3 313 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 GTPBP3Q969Y2 492 aaKnown RBP9.47□□□□□ -0.89
USP11-201ENST00000218348 RNF31Q96EP0 1072 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 COX14Q96I36 57 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 KCNN3Q9UGI6 736 aa9.47□□□□□ -0.89
USP11-201ENST00000218348 NDRG2Q9UN36 371 aaKnown RBP9.47□□□□□ -0.89
USP11-201ENST00000218348 AGRPO00253 132 aa9.46□□□□□ -0.89
USP11-201ENST00000218348 GCM2O75603 506 aaPredicted RBP9.46□□□□□ -0.89
USP11-201ENST00000218348 ATE1O95260 518 aa9.46□□□□□ -0.89
USP11-201ENST00000218348 RASGRP1O95267 797 aa9.46□□□□□ -0.89
USP11-201ENST00000218348 BCHEP06276 602 aa9.46□□□□□ -0.89
USP11-201ENST00000218348 KIR2DL1P43626 348 aaPredicted RBP9.46□□□□□ -0.89
USP11-201ENST00000218348 NUDT6P53370 316 aa9.46□□□□□ -0.89
USP11-201ENST00000218348 SPIBQ01892 262 aa9.46□□□□□ -0.89
USP11-201ENST00000218348 TRIM16LQ309B1 348 aa9.46□□□□□ -0.89
USP11-201ENST00000218348 FGD3Q5JSP0 725 aa9.46□□□□□ -0.89
USP11-201ENST00000218348 ANXA8L1Q5VT79 327 aa9.46□□□□□ -0.89
USP11-201ENST00000218348 FAM205BPQ63HN1 556 aa9.46□□□□□ -0.89
USP11-201ENST00000218348 ZNF776Q68DI1 518 aaPredicted RBP9.46□□□□□ -0.89
USP11-201ENST00000218348 LYPD8Q6UX82 237 aa9.46□□□□□ -0.89
USP11-201ENST00000218348 NUDT18Q6ZVK8 323 aa9.46□□□□□ -0.89
USP11-201ENST00000218348 IL17RCQ8NAC3 791 aa9.46□□□□□ -0.89
USP11-201ENST00000218348 OR9Q2Q8NGE9 314 aa9.46□□□□□ -0.89
USP11-201ENST00000218348 UTP15Q8TED0 518 aaKnown RBP9.46□□□□□ -0.89
USP11-201ENST00000218348 HMGB4Q8WW32 186 aa9.46□□□□□ -0.89
USP11-201ENST00000218348 XAGE5Q8WWM1 108 aa9.46□□□□□ -0.89
USP11-201ENST00000218348 COL26A1Q96A83 441 aa9.46□□□□□ -0.89
USP11-201ENST00000218348 SIPA1Q96FS4 1042 aa9.46□□□□□ -0.89
USP11-201ENST00000218348 CAMK1GQ96NX5 476 aa9.46□□□□□ -0.89
USP11-201ENST00000218348 PIP5K1AQ99755 562 aa9.46□□□□□ -0.89
USP11-201ENST00000218348 DPH7Q9BTV6 452 aa9.46□□□□□ -0.89
USP11-201ENST00000218348 IL1RAPQ9NPH3 570 aa9.46□□□□□ -0.89
USP11-201ENST00000218348 KRT84Q9NSB2 600 aa9.46□□□□□ -0.89
USP11-201ENST00000218348 TMEM45AQ9NWC5 275 aa9.46□□□□□ -0.89
USP11-201ENST00000218348 C3orf18Q9UK00 162 aa9.46□□□□□ -0.89
USP11-201ENST00000218348 C1orf226A1L170 272 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 NDUFS4O43181 175 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 ERI3O43414 337 aaKnown RBP9.46□□□□□ -0.9
USP11-201ENST00000218348 CEACAM5P06731 702 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 SRFP11831 508 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 MATN1P21941 496 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 PTX3P26022 381 aaPredicted RBP9.46□□□□□ -0.9
USP11-201ENST00000218348 FEN1P39748 380 aaKnown RBP9.46□□□□□ -0.9
USP11-201ENST00000218348 CDK9P50750 372 aaKnown RBP9.46□□□□□ -0.9
USP11-201ENST00000218348 CCR8P51685 355 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 SNRPNP63162 240 aaKnown RBP9.46□□□□□ -0.9
USP11-201ENST00000218348 KHDRBS2Q5VWX1 349 aaKnown RBP9.46□□□□□ -0.9
USP11-201ENST00000218348 SDE2Q6IQ49 451 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 CEACAM20Q6UY09 585 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 OR52E1Q8NGJ3 308 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 ISOC1Q96CN7 298 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 EPHX3Q9H6B9 360 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 SYNPO2LQ9H987 977 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 ADPRHL2Q9NX46 363 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 TAS2R9Q9NYW1 312 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 ZNF639Q9UID6 485 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 GMPPBQ9Y5P6 360 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 CACNA1IQ9P0X4 2223 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 C17orf113A0A1B0GUU1 675 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 BMP10O95393 424 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 EIF2S1P05198 315 aaKnown RBP9.46□□□□□ -0.9
USP11-201ENST00000218348 POLR2CP19387 275 aaPredicted RBP9.46□□□□□ -0.9
USP11-201ENST00000218348 C5AR1P21730 350 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 RPS3AP61247 264 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms