RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 GLB1L3Q8NCI6 653 aaPredicted RBP25.55■■□□□ 1.68
CHMP4B-201ENST00000217402 PLPP5Q8NEB5 264 aa25.55■■□□□ 1.68
CHMP4B-201ENST00000217402 ZNF764Q96H86 408 aaPredicted RBP25.55■■□□□ 1.68
CHMP4B-201ENST00000217402 ATAD3AQ9NVI7 634 aa25.55■■□□□ 1.68
CHMP4B-201ENST00000217402 TAS2R7Q9NYW3 318 aa25.55■■□□□ 1.68
CHMP4B-201ENST00000217402 NR5A2O00482 541 aa25.54■■□□□ 1.68
CHMP4B-201ENST00000217402 PDPK1O15530 556 aa25.54■■□□□ 1.68
CHMP4B-201ENST00000217402 KLK10O43240 276 aa25.54■■□□□ 1.68
CHMP4B-201ENST00000217402 OTX2P32243 289 aa25.54■■□□□ 1.68
CHMP4B-201ENST00000217402 PTGER1P34995 402 aa25.54■■□□□ 1.68
CHMP4B-201ENST00000217402 ZFP36L2P47974 494 aaKnown RBP25.54■■□□□ 1.68
CHMP4B-201ENST00000217402 DUSP2Q05923 314 aa25.54■■□□□ 1.68
CHMP4B-201ENST00000217402 IL10RAQ13651 578 aa25.54■■□□□ 1.68
CHMP4B-201ENST00000217402 OR4F3Q6IEY1 312 aa25.54■■□□□ 1.68
CHMP4B-201ENST00000217402 GK5Q6ZS86 529 aa25.54■■□□□ 1.68
CHMP4B-201ENST00000217402 FUNDC1Q8IVP5 155 aa25.54■■□□□ 1.68
CHMP4B-201ENST00000217402 ANKS4BQ8N8V4 417 aa25.54■■□□□ 1.68
CHMP4B-201ENST00000217402 BBS4Q96RK4 519 aa25.54■■□□□ 1.68
CHMP4B-201ENST00000217402 DUSP26Q9BV47 211 aa25.54■■□□□ 1.68
CHMP4B-201ENST00000217402 FAM117AQ9C073 453 aa25.54■■□□□ 1.68
CHMP4B-201ENST00000217402 SEMA3GQ9NS98 782 aa25.54■■□□□ 1.68
CHMP4B-201ENST00000217402 TCRBV16S1A1N1A0A5B0 115 aa25.53■■□□□ 1.68
CHMP4B-201ENST00000217402 FAM234BA2RU67 622 aa25.53■■□□□ 1.68
CHMP4B-201ENST00000217402 C1QTNF9BB2RNN3 333 aa25.53■■□□□ 1.68
CHMP4B-201ENST00000217402 IFNA16P05015 189 aa25.53■■□□□ 1.68
CHMP4B-201ENST00000217402 C1QTNF9P0C862 333 aa25.53■■□□□ 1.68
CHMP4B-201ENST00000217402 CPMP14384 443 aa25.53■■□□□ 1.68
CHMP4B-201ENST00000217402 DDX5P17844 614 aaKnown RBP25.53■■□□□ 1.68
CHMP4B-201ENST00000217402 NTSP30990 170 aa25.53■■□□□ 1.68
CHMP4B-201ENST00000217402 S100A3P33764 101 aa25.53■■□□□ 1.68
CHMP4B-201ENST00000217402 KIR3DL1P43629 444 aa25.53■■□□□ 1.68
CHMP4B-201ENST00000217402 IGLV3-21P80748 117 aaPredicted RBP25.53■■□□□ 1.68
CHMP4B-201ENST00000217402 DPY19L1Q2PZI1 675 aa25.53■■□□□ 1.68
CHMP4B-201ENST00000217402 CAMKMTQ7Z624 323 aa25.53■■□□□ 1.68
CHMP4B-201ENST00000217402 PPWD1Q96BP3 646 aaKnown RBP25.53■■□□□ 1.68
CHMP4B-201ENST00000217402 C8orf44Q96CB5 159 aa25.53■■□□□ 1.68
CHMP4B-201ENST00000217402 COQ8BQ96D53 544 aa25.53■■□□□ 1.68
CHMP4B-201ENST00000217402 ZNF681Q96N22 645 aa25.53■■□□□ 1.68
CHMP4B-201ENST00000217402 PNO1Q9NRX1 252 aaKnown RBP25.53■■□□□ 1.68
CHMP4B-201ENST00000217402 CAPN7Q9Y6W3 813 aa25.53■■□□□ 1.68
CHMP4B-201ENST00000217402 FRYQ5TBA9 3013 aa25.53■■□□□ 1.68
CHMP4B-201ENST00000217402 OR10H2O60403 315 aa25.52■■□□□ 1.68
CHMP4B-201ENST00000217402 DCTN3O75935 186 aa25.52■■□□□ 1.68
CHMP4B-201ENST00000217402 CSNK2A2P19784 350 aaPredicted RBP25.52■■□□□ 1.68
CHMP4B-201ENST00000217402 SRSF11Q05519 484 aaKnown RBP25.52■■□□□ 1.68
CHMP4B-201ENST00000217402 KLF10Q13118 480 aa25.52■■□□□ 1.68
CHMP4B-201ENST00000217402 SERTAD2Q14140 314 aa25.52■■□□□ 1.68
CHMP4B-201ENST00000217402 TIGD2Q4W5G0 525 aa25.52■■□□□ 1.68
CHMP4B-201ENST00000217402 ANKRD37Q7Z713 158 aa25.52■■□□□ 1.68
CHMP4B-201ENST00000217402 CCDC116Q8IYX3 515 aa25.52■■□□□ 1.68
CHMP4B-201ENST00000217402 LRRC25Q8N386 305 aaPredicted RBP25.52■■□□□ 1.68
CHMP4B-201ENST00000217402 EFHD1Q9BUP0 239 aa25.52■■□□□ 1.68
CHMP4B-201ENST00000217402 BHLHE41Q9C0J9 482 aaPredicted RBP25.52■■□□□ 1.68
CHMP4B-201ENST00000217402 MYLK2Q9H1R3 596 aa25.52■■□□□ 1.68
CHMP4B-201ENST00000217402 SLAMF7Q9NQ25 335 aa25.52■■□□□ 1.68
CHMP4B-201ENST00000217402 MRGBPQ9NV56 204 aa25.52■■□□□ 1.68
CHMP4B-201ENST00000217402 A8MUA0 341 aa25.52■■□□□ 1.68
CHMP4B-201ENST00000217402 CREG1O75629 220 aa25.52■■□□□ 1.68
CHMP4B-201ENST00000217402 CYC1P08574 325 aa25.52■■□□□ 1.68
CHMP4B-201ENST00000217402 PORP16435 677 aaPredicted RBP25.52■■□□□ 1.68
CHMP4B-201ENST00000217402 MMP11P24347 488 aa25.52■■□□□ 1.68
CHMP4B-201ENST00000217402 KCNK10P57789 538 aa25.52■■□□□ 1.68
CHMP4B-201ENST00000217402 PLIN5Q00G26 463 aa25.52■■□□□ 1.68
CHMP4B-201ENST00000217402 OR8J2Q8NGG1 315 aa25.52■■□□□ 1.68
CHMP4B-201ENST00000217402 VPS33AQ96AX1 596 aa25.52■■□□□ 1.68
CHMP4B-201ENST00000217402 DGAT2Q96PD7 388 aa25.52■■□□□ 1.68
CHMP4B-201ENST00000217402 HS3ST3B1Q9Y662 390 aa25.52■■□□□ 1.68
CHMP4B-201ENST00000217402 IGHV3-20A0A0C4DH32 117 aa25.51■■□□□ 1.67
CHMP4B-201ENST00000217402 PGRP06401 933 aa25.51■■□□□ 1.67
CHMP4B-201ENST00000217402 NCBP2P52298 156 aaKnown RBP eCLIP25.51■■□□□ 1.677e-13■□□□□ 8.4
CHMP4B-201ENST00000217402 OR4D2P58180 307 aa25.51■■□□□ 1.67
CHMP4B-201ENST00000217402 PHC1P78364 1004 aa25.51■■□□□ 1.67
CHMP4B-201ENST00000217402 EEF1A2Q05639 463 aaKnown RBP25.51■■□□□ 1.67
CHMP4B-201ENST00000217402 RCAN2Q14206 197 aa25.51■■□□□ 1.67
CHMP4B-201ENST00000217402 SSPNQ14714 243 aa25.51■■□□□ 1.67
CHMP4B-201ENST00000217402 BLOC1S3Q6QNY0 202 aa25.51■■□□□ 1.67
CHMP4B-201ENST00000217402 TMEM205Q6UW68 189 aa25.51■■□□□ 1.67
CHMP4B-201ENST00000217402 UNQ6494/PRO21346Q6UXR6 183 aa25.51■■□□□ 1.67
CHMP4B-201ENST00000217402 SAMD14Q8IZD0 417 aaPredicted RBP25.51■■□□□ 1.67
CHMP4B-201ENST00000217402 DOK4Q8TEW6 326 aa25.51■■□□□ 1.67
CHMP4B-201ENST00000217402 LRRC37BQ96QE4 947 aa25.51■■□□□ 1.67
CHMP4B-201ENST00000217402 C19orf25Q9UFG5 118 aaPredicted RBP25.51■■□□□ 1.67
CHMP4B-201ENST00000217402 CELSR3Q9NYQ7 3312 aa25.5■■□□□ 1.67
CHMP4B-201ENST00000217402 MYO1GB0I1T2 1018 aa25.5■■□□□ 1.67
CHMP4B-201ENST00000217402 IGHEP01854 428 aa25.5■■□□□ 1.67
CHMP4B-201ENST00000217402 IL6P05231 212 aa25.5■■□□□ 1.67
CHMP4B-201ENST00000217402 SLC35E2P0CK97 266 aa25.5■■□□□ 1.67
CHMP4B-201ENST00000217402 WT1P19544 449 aaPredicted RBP25.5■■□□□ 1.67
CHMP4B-201ENST00000217402 STT3AP46977 705 aa25.5■■□□□ 1.67
CHMP4B-201ENST00000217402 LTB4RQ15722 352 aa25.5■■□□□ 1.67
CHMP4B-201ENST00000217402 SFT2D3Q587I9 215 aa25.5■■□□□ 1.67
CHMP4B-201ENST00000217402 PPP1R32Q7Z5V6 425 aa25.5■■□□□ 1.67
CHMP4B-201ENST00000217402 ANKRD46Q86W74 232 aa25.5■■□□□ 1.67
CHMP4B-201ENST00000217402 ST13P4Q8IZP2 240 aaPredicted RBP25.5■■□□□ 1.67
CHMP4B-201ENST00000217402 SUN3Q8TAQ9 357 aa25.5■■□□□ 1.67
CHMP4B-201ENST00000217402 RBM18Q96H35 190 aaKnown RBP25.5■■□□□ 1.67
CHMP4B-201ENST00000217402 DCBLD2Q96PD2 775 aa25.5■■□□□ 1.67
CHMP4B-201ENST00000217402 OR52E6Q96RD3 313 aa25.5■■□□□ 1.67
CHMP4B-201ENST00000217402 CCDC106Q9BWC9 280 aa25.5■■□□□ 1.67
CHMP4B-201ENST00000217402 DPH1Q9BZG8 443 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms