RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 DDX6P26196 483 aaKnown RBP eCLIP11.62□□□□□ -0.556e-6■■■■■ 27.7
TSPAN9-201ENST00000011898 HTR2AP28223 471 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 ADRA1AP35348 466 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 MLLT3P42568 568 aaPredicted RBP11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 LIPKQ5VXJ0 399 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 WASH2PQ6VEQ5 465 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 RPLP0P6Q8NHW5 317 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 CD200R1Q8TD46 325 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 SMIM14Q96QK8 99 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 GAL3ST1Q99999 423 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 MGME1Q9BQP7 344 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 TMED9Q9BVK6 235 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 AGPAT4Q9NRZ5 378 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 GPR45Q9Y5Y3 372 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 NUMA1Q14980 2115 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 PIK3CBP42338 1070 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 EMX1Q04741 257 aaPredicted RBP11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 MBTPS1Q14703 1052 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 GRK1Q15835 563 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 LRRC37A5PQ49AS3 106 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 GTDC1Q4AE62 458 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 ALG1LQ6GMV1 187 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 ZNF425Q6IV72 752 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 FAM198BQ6UWH4 519 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 ZNF782Q6ZMW2 699 aaPredicted RBP11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 NPAS3Q8IXF0 933 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 UBQLNLQ8IYU4 475 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 BEND7Q8N7W2 519 aaPredicted RBP11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 GPR150Q8NGU9 434 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 THAP6Q8TBB0 222 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 SLC35B4Q969S0 331 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 IL23AQ9NPF7 189 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 PLSCR3Q9NRY6 295 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 VAPAQ9P0L0 249 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 A0A096LPI6 279 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 C2orf78A6NCI8 922 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 F8W036 122 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 HOXC11O43248 304 aaPredicted RBP11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 EEF1E1O43324 174 aaKnown RBP11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 SULT1C4O75897 302 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 VIPP01282 170 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 WASP42768 502 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 OR1E2P47887 323 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 PREPP48147 710 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 BLOC1S1P78537 153 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 ILF3Q12906 894 aaKnown RBP eCLIP11.61□□□□□ -0.557e-6■■■■□ 19.9
TSPAN9-201ENST00000011898 FADDQ13158 208 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 RAPSNQ13702 412 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 NTRK2Q16620 822 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 SLC36A3Q495N2 470 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 SPIN4Q56A73 249 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 BRAT1Q6PJG6 821 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 MFSD2AQ8NA29 543 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 OR8K5Q8NH50 307 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 C1orf216Q8TAB5 229 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 FRS2Q8WU20 508 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 ISL2Q96A47 359 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 NXPE2Q96DL1 559 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 SLC30A3Q99726 388 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 TMEM175Q9BSA9 504 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 CACNG6Q9BXT2 260 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 QRSL1Q9H0R6 528 aaKnown RBP11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 ZCCHC3Q9NUD5 404 aaKnown RBP11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 SLAMF8Q9P0V8 285 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 MGAT4CQ9UBM8 478 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 INTS6Q9UL03 887 aaKnown RBP11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 MAGED1Q9Y5V3 778 aaPredicted RBP11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 SIP14410 1827 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 TRBC2A0A5B9 178 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 WASH4PA8MWX3 477 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 WRBO00258 174 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 ACOT8O14734 319 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 PDCD5O14737 125 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 SOCS5O75159 536 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 EPHX1P07099 455 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 RPS17P08708 135 aaKnown RBP11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 GGT1P19440 569 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 RYKP34925 604 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 EMP3P54852 163 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 RPP38P78345 283 aaKnown RBP11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 C21orf62-AS1Q17RA5 79 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 CYBRD1Q53TN4 286 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 PEG10Q86TG7 708 aaKnown RBP11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 CYB5D2Q8WUJ1 264 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 RFT1Q96AA3 541 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 C11orf84Q9BUA3 381 aaPredicted RBP11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 IFT27Q9BW83 186 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 HOXD1Q9GZZ0 328 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 TMEM168Q9H0V1 697 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 OR51E2Q9H255 320 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 IL17CQ9P0M4 197 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 ERVK-19Q9WJR5 959 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 GPR39O43194 453 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 LYRM1O43325 122 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 GJB3O75712 270 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 JUPP14923 745 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 CSF2RAP15509 400 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 DGKGP49619 791 aa11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 STK19P49842 368 aaPredicted RBP11.61□□□□□ -0.55
TSPAN9-201ENST00000011898 RGS8P57771 180 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms