RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 SAP130Q9H0E3 1048 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 RPF2Q9H7B2 306 aaKnown RBP4.06□□□□□ -1.76
CFTR-201ENST00000003084 PLGRKTQ9HBL7 147 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 PAK6Q9NQU5 681 aaPredicted RBP4.06□□□□□ -1.76
CFTR-201ENST00000003084 TVP23BQ9NYZ1 205 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 LRFN1Q9P244 771 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 WDR45Q9Y484 360 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 OR1A2Q9Y585 309 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 U3KQV3 271 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 BAZ2BQ9UIF8 2168 aaKnown RBP4.06□□□□□ -1.76
CFTR-201ENST00000003084 CACNA1SQ13698 1873 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 LINC00854A0A1B0GVQ3 168 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 VGLL3A8MV65 326 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 NPIPA2E9PIF3 369 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 NPIPA3F8WFD2 350 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 SEMA3DO95025 777 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 FARS2O95363 451 aaKnown RBP4.06□□□□□ -1.76
CFTR-201ENST00000003084 DBIP07108 87 aaKnown RBP4.06□□□□□ -1.76
CFTR-201ENST00000003084 HOXD9P28356 352 aaPredicted RBP4.06□□□□□ -1.76
CFTR-201ENST00000003084 GABRA3P34903 492 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 ARHGDIBP52566 201 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 ZNF140P52738 457 aaPredicted RBP4.06□□□□□ -1.76
CFTR-201ENST00000003084 CDKN2DP55273 166 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 RAB25P57735 213 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 MC1RQ01726 317 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 OLIG2Q13516 323 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 RCAN2Q14206 197 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 VMACQ2NL98 169 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 UNC50Q53HI1 259 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 COQ5Q5HYK3 327 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 TMEM198Q66K66 360 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 CXorf57Q6NSI4 855 aaKnown RBP4.06□□□□□ -1.76
CFTR-201ENST00000003084 SLC2A7Q6PXP3 512 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 C8orf86Q6ZUL3 223 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 IGDCC3Q8IVU1 814 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 LGI4Q8N135 537 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 GHDCQ8N2G8 530 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 MEIOBQ8N635 442 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 NPWQ8N729 165 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 OR10H4Q8NGA5 316 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 EZH1Q92800 747 aaPredicted RBP4.06□□□□□ -1.76
CFTR-201ENST00000003084 TCEAL4Q96EI5 215 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 MND1Q9BWT6 205 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 KLHL25Q9H0H3 589 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 TCF7L1Q9HCS4 588 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 POT1Q9NUX5 634 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 ACTR3BQ9P1U1 418 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 SPO11Q9Y5K1 396 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 OAS3Q9Y6K5 1087 aaKnown RBP4.06□□□□□ -1.76
CFTR-201ENST00000003084 AP1M2Q9Y6Q5 423 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 COMMD3-BMI1R4GMX3 469 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 A0A0G2JPF8 293 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 UNC119BA6NIH7 251 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 HNRNPCL3B7ZW38 293 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 FAAHO00519 579 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 CREG1O75629 220 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 OXSR1O95747 527 aaPredicted RBP4.06□□□□□ -1.76
CFTR-201ENST00000003084 C8orf89P0DMQ9 161 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 HNRNPCL4P0DMR1 293 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 DBTP11182 482 aaKnown RBP4.06□□□□□ -1.76
CFTR-201ENST00000003084 MTHFD1P11586 935 aaKnown RBP4.06□□□□□ -1.76
CFTR-201ENST00000003084 HOXB3P14651 431 aaPredicted RBP4.06□□□□□ -1.76
CFTR-201ENST00000003084 PRKCAP17252 672 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 FPR1P21462 350 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 FOXN2P32314 431 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 MAGEA6P43360 314 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 CDKL1Q00532 357 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 DAG1Q14118 895 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 GANABQ14697 944 aaKnown RBP4.06□□□□□ -1.76
CFTR-201ENST00000003084 SEC23BQ15437 767 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 CCDC92Q53HC0 331 aaPredicted RBP4.06□□□□□ -1.76
CFTR-201ENST00000003084 DENND5AQ6IQ26 1287 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 RASSF6Q6ZTQ3 369 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 USP43Q70EL4 1123 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 GID4Q8IVV7 300 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 GPALPP1Q8IXQ4 340 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 FITM2Q8N6M3 262 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 METTL25Q8N6Q8 603 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 UXS1Q8NBZ7 420 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 FANK1Q8TC84 345 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 ASB15Q8WXK1 588 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 SLC39A3Q9BRY0 314 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 IFT46Q9NQC8 304 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 PRDM7Q9NQW5 492 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 LHX3Q9UBR4 397 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 BAIAP2Q9UQB8 552 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 A0A1B0GTW7 788 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 LOC285095A0A1B0GVY8 99 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 NPIPB15A6NHN6 443 aaPredicted RBP4.06□□□□□ -1.76
CFTR-201ENST00000003084 LDB2O43679 373 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 CACNG3O60359 315 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 RFPL1O75677 317 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 FGF3P11487 239 aaPredicted RBP4.06□□□□□ -1.76
CFTR-201ENST00000003084 YAP1P46937 504 aaKnown RBP4.06□□□□□ -1.76
CFTR-201ENST00000003084 SLC6A8P48029 635 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 PRLHRP49683 370 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 TAS2R38P59533 333 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 E2F1Q01094 437 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 DOC2AQ14183 400 aa4.06□□□□□ -1.76
CFTR-201ENST00000003084 TRAM1Q15629 374 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms