RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 ThpoP40226 356 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Cfl2P45591 166 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Rin3P59729 980 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Barhl1P63157 327 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Hoxd13P70217 339 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Slc26a10Q5EBI0 492 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Taar7eQ5QD09 358 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 AktipQ64362 292 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Fam167aQ6P1G6 215 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Olfr591Q7TRR7 314 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Mief1Q8BGV8 463 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Cyp51a1Q8K0C4 503 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 C1qtnf12Q8R2Z0 308 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Spon1Q8VCC9 807 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Cxxc5Q91WA4 317 aaKnown RBP9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Abcg4Q91WA9 646 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Gm26657Q9CVR1 127 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Mospd2Q9CWP6 518 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Snx20Q9D2Y5 313 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 NaaaQ9D7V9 362 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Hapln1Q9QUP5 356 aaKnown RBP9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Plekhb1Q9QYE9 243 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 B4galt6Q9WVK5 382 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Igkv10-94A0A075B5L1 115 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Gm5141A0A0J9YUW3 581 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Cd300ld4A2A7W1 245 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Vmn1r9A2RST7 299 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Vmn2r115E9Q0E7 857 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Vmn2r97K7N6Z2 861 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Slc6a2O55192 617 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 C9P06683 548 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Phxr1P15973 60 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Fbxo40P62932 710 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Rack1P68040 317 aaKnown RBP9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 VaspP70460 375 aaKnown RBP9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Cds1P98191 461 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Rad51Q08297 339 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Malt1Q2TBA3 832 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Ppp3r2Q63811 179 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 GkQ64516 559 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Cd300ld3Q6SJQ5 245 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Tas2r38Q7TQA6 331 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Ostm1Q8BGT0 338 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Cox14Q8BH51 57 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Itih5Q8BJD1 952 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Slc25a24Q8BMD8 475 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Agfg1Q8K2K6 561 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Olfr478Q8VG04 314 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 EdaraddQ8VHX2 208 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Pex16Q91XC9 336 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Lrrc49Q91YK0 686 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Scamp4Q9JKV5 230 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Upk3aQ9JKX8 287 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Khdrbs3Q9R226 346 aaKnown RBP9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Vmn1r10W4VSP8 311 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 4930579F01RikE9Q3L6 325 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Gm17555F6U8B9 371 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Gml2G5E8L7 176 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 P01675 107 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 P01676 107 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 P01677 107 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 P01678 107 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 FurinP23188 793 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Nsg2P47759 171 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Polr1cP52432 346 aaKnown RBP9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Pebp1P70296 187 aaKnown RBP9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Tigd2Q0VBL1 525 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Olfr681Q3SXH8 315 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 CamkmtQ3U2J5 323 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Mep1bQ61847 704 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 CtsoQ8BM88 312 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Tgm4Q8BZH1 670 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Wdr37Q8CBE3 496 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 D2hgdhQ8CIM3 535 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Olfr308Q8VFP2 308 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Olfr1417Q8VGJ6 315 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Olfr679Q8VGV0 315 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Spz1Q99MY0 378 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Trappc5Q9CQA1 188 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Dcun1d5Q9CXV9 237 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Ift46Q9DB07 301 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Lama2Q60675 3118 aaKnown RBP9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 PtgdsO09114 189 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Rplp2P99027 115 aaKnown RBP9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Pde12Q3TIU4 608 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Krt76Q3UV17 594 aaKnown RBP9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Cramp1Q6PG95 1285 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Rhox11Q810N8 206 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 SynbQ8BI41 618 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Derl2Q8BNI4 239 aaKnown RBP9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 NarsQ8BP47 559 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Kiaa1671Q8BRV5 308 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 B4gat1Q8BWP8 415 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Tctn1Q8BZ64 593 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Tmsb15lQ8C0W0 80 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Lancl3Q8CD19 420 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Znf628Q8CJ78 1038 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Polr1eQ8K202 482 aaKnown RBP9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Ddx28Q9CWT6 540 aaKnown RBP9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 FopnlQ9CZS3 174 aa9.34□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms