RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Olfr135Q8VEY4 312 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Q8WUR0 141 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Slc39a1Q9QZ03 324 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gm17949A0A1B0GRV7 212 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Tnfrsf14A0A1W2P7D5 276 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gm21103E9Q2Q1 267 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gm8020F6WLE9 229 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 NumblO08919 604 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Nme6O88425 189 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Wnt4P22724 351 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Eci1P42125 289 aaKnown RBP9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Lim2P56563 173 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Fam71f1Q3UZD7 341 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Cdk15Q3V3A1 433 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Aoc2Q812C9 757 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Zbtb20Q8K0L9 741 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr1217Q8VGG1 304 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr791Q8VGJ0 312 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Otub2Q9CQX0 234 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Thsd1Q9JM61 851 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Acox1Q9R0H0 661 aaKnown RBP9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Trmt1lA2RSY6 728 aaKnown RBP9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Atxn1lP0C7T6 687 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Tcea1P10711 301 aaKnown RBP9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Muc13P19467 573 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gdf6P43028 454 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Kcnj13P86046 360 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gch1Q05915 241 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Klhl21Q3U410 597 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Bmp3Q8BHE5 468 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Arhgap19Q8BRH3 494 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 WrbQ8K0D7 174 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Ccm2Q8K2Y9 453 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr771Q8VFH6 317 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr45Q8VGM1 311 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr659Q8VGV6 322 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Mrps14Q9CR88 128 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 D7h11orf16Q9JJR6 402 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Syngr1O55100 234 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Cd83O88324 196 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 RptnP97347 1118 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Eci3Q78JN3 317 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Sdhaf2Q8C6I2 164 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 FktnQ8R507 461 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Dnajc24Q91ZF0 196 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Fank1Q9DAM9 344 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Adam24Q9R160 761 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 AireQ9Z0E3 552 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 ItpkbB2RXC2 942 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gm2075J3QMW5 144 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Alx3O70137 343 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Slc7a2P18581 657 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Zp2P20239 713 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Sept4P28661 478 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Aldh16a1Q571I9 802 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Acot7Q91V12 381 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Clca3a2Q9EQR4 902 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Slc6a14Q9JMA9 638 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Clca3a1Q9QX15 902 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Cntnap1O54991 1385 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gm4131A0A140LJ24 318 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Prf1P10820 554 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Atp1b2P14231 290 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 MaxP28574 160 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Slc26a1P58735 704 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Tas2r123P59528 333 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Acta2P62737 377 aaKnown RBP9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Actg2P63268 376 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Casp7P97864 303 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 KcnrgQ2TUM3 264 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Nedd4lQ8CFI0 1004 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Mptx1Q8R1M8 219 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Mmgt2Q8R3L0 123 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr1351Q8VGU6 319 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Nmrk2Q9D7C9 195 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Rgs21V9GXQ3 152 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 1700028J19RikA0A0U1RP08 172 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Scgb1b30A2BH64 92 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Vmn2r24D3YUI0 854 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gm7233E9PZI8 198 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gm10719E9Q7T3 227 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gm9732F6QVC4 198 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gm8334F7CD45 553 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gm8104K7N744 198 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 AlyrefO08583 255 aaKnown RBP9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 EdnrbP48302 442 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Cdk10Q3UMM4 360 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Spag8Q3V0Q6 470 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 St8sia4Q64692 359 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 ParpbpQ6IRT3 573 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Adam29Q811Q4 763 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Kyat1Q8BTY1 424 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 TtpaQ8BWP5 278 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Q8CF31 99 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 FntbQ8K2I1 437 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Bcl7aQ9CXE2 210 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 D10Jhu81eQ9D172 266 aa9.76□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Btbd35f28A2CFD5 498 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Btbd35f30J3QML3 498 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Efna3O08545 230 aa9.75□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms