RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 DHFR2Q86XF0 187 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 PTRH1Q86Y79 214 aaKnown RBP12.39□□□□□ -0.43
PHGDH-221ENST00000641573 MARCH9Q86YJ5 346 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 CARFQ8N187 725 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 ZNF843Q8N446 348 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 ENDOVQ8N8Q3 282 aaKnown RBP12.39□□□□□ -0.43
PHGDH-221ENST00000641573 FAM181AQ8N9Y4 354 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 OR10A6Q8NH74 314 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 GOT1L1Q8NHS2 421 aaPredicted RBP12.39□□□□□ -0.43
PHGDH-221ENST00000641573 OR5P2Q8WZ92 322 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 ZNF583Q96ND8 569 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 TRIM15Q9C019 465 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 CHRNA10Q9GZZ6 450 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 MUC13Q9H3R2 512 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 S100A14Q9HCY8 104 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 PDE7BQ9NP56 450 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 TAS2R7Q9NYW3 318 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 EHD3Q9NZN3 535 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 C5AR2Q9P296 337 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 ZNF282Q9UDV7 671 aaPredicted RBP12.39□□□□□ -0.43
PHGDH-221ENST00000641573 EGFL7Q9UHF1 273 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 PLCL2Q9UPR0 1127 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 PCDHB3Q9Y5E6 796 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 SNX13Q9Y5W8 968 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 U3KQA8 63 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 C1orf226A1L170 272 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 FAM149AA5PLN7 773 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 CLIC1O00299 241 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 TXNDC9O14530 226 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 ARPC2O15144 300 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 RRP8O43159 456 aaKnown RBP12.38□□□□□ -0.43
PHGDH-221ENST00000641573 PROM1O43490 865 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 PRKRAO75569 313 aaKnown RBP12.38□□□□□ -0.43
PHGDH-221ENST00000641573 ZBTB11O95625 1053 aaPredicted RBP12.38□□□□□ -0.43
PHGDH-221ENST00000641573 IL1RNP18510 177 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 ATP6V1B2P21281 511 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 CSF2RBP32927 897 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 AP2B1P63010 937 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 HBA1P69905 142 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 GAB1Q13480 694 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 RUNX2Q13950 521 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 PRTGQ2VWP7 1150 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 CCDC157Q569K6 752 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 C18orf63Q68DL7 685 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 LCN8Q6JVE9 175 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 FAM180BQ6P0A1 224 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 GUSBP11Q6P575 273 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 CYP2R1Q6VVX0 501 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 CALHM3Q86XJ0 350 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 PYDC1Q8WXC3 89 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 FAM120BQ96EK7 910 aaKnown RBP12.38□□□□□ -0.43
PHGDH-221ENST00000641573 RSRC1Q96IZ7 334 aaKnown RBP12.38□□□□□ -0.43
PHGDH-221ENST00000641573 LRGUKQ96M69 825 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 KAT8Q9H7Z6 458 aaKnown RBP12.38□□□□□ -0.43
PHGDH-221ENST00000641573 TPT1P8Q9HAU6 139 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 TAS2R9Q9NYW1 312 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 TMEM9Q9P0T7 183 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 ACTR3BQ9P1U1 418 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 PHF11Q9UIL8 331 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 UTS2RQ9UKP6 389 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 SLC22A7Q9Y694 548 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 HECTD1Q9ULT8 2610 aa12.38□□□□□ -0.43
PHGDH-221ENST00000641573 MN1Q10571 1320 aaPredicted RBP12.37□□□□□ -0.43
PHGDH-221ENST00000641573 ZNF860A6NHJ4 632 aa12.37□□□□□ -0.43
PHGDH-221ENST00000641573 GLOD5A6NK44 160 aa12.37□□□□□ -0.43
PHGDH-221ENST00000641573 WASHC1A8K0Z3 465 aa12.37□□□□□ -0.43
PHGDH-221ENST00000641573 CYSRT1A8MQ03 144 aa12.37□□□□□ -0.43
PHGDH-221ENST00000641573 FAM220BPB1ANY3 271 aa12.37□□□□□ -0.43
PHGDH-221ENST00000641573 PGRMC2O15173 223 aa12.37□□□□□ -0.43
PHGDH-221ENST00000641573 PCDHGA12O60330 932 aa12.37□□□□□ -0.43
PHGDH-221ENST00000641573 GALR3O60755 368 aaPredicted RBP12.37□□□□□ -0.43
PHGDH-221ENST00000641573 DNAJB6O75190 326 aa12.37□□□□□ -0.43
PHGDH-221ENST00000641573 C1QCP02747 245 aa12.37□□□□□ -0.43
PHGDH-221ENST00000641573 NR2F6P10588 404 aa12.37□□□□□ -0.43
PHGDH-221ENST00000641573 NCK1P16333 377 aa12.37□□□□□ -0.43
PHGDH-221ENST00000641573 CPN2P22792 545 aa12.37□□□□□ -0.43
PHGDH-221ENST00000641573 PPIBP23284 216 aaKnown RBP12.37□□□□□ -0.43
PHGDH-221ENST00000641573 ITPKBP27987 946 aa12.37□□□□□ -0.43
PHGDH-221ENST00000641573 SOX11P35716 441 aa12.37□□□□□ -0.43
PHGDH-221ENST00000641573 FRKP42685 505 aaPredicted RBP12.37□□□□□ -0.43
PHGDH-221ENST00000641573 ARL4DP49703 201 aa12.37□□□□□ -0.43
PHGDH-221ENST00000641573 SEPHS1P49903 392 aa12.37□□□□□ -0.43
PHGDH-221ENST00000641573 GZMMP51124 257 aa12.37□□□□□ -0.43
PHGDH-221ENST00000641573 MANFP55145 182 aaKnown RBP12.37□□□□□ -0.43
PHGDH-221ENST00000641573 LIM2P55344 173 aa12.37□□□□□ -0.43
PHGDH-221ENST00000641573 PCBP4P57723 403 aaKnown RBP12.37□□□□□ -0.43
PHGDH-221ENST00000641573 OLR1P78380 273 aa12.37□□□□□ -0.43
PHGDH-221ENST00000641573 MRPS22P82650 360 aaKnown RBP12.37□□□□□ -0.43
PHGDH-221ENST00000641573 TNFRSF17Q02223 184 aa12.37□□□□□ -0.43
PHGDH-221ENST00000641573 ABHD18Q0P651 414 aa12.37□□□□□ -0.43
PHGDH-221ENST00000641573 CAMK2BQ13554 666 aa12.37□□□□□ -0.43
PHGDH-221ENST00000641573 FXNQ16595 210 aa12.37□□□□□ -0.43
PHGDH-221ENST00000641573 SNAP47Q5SQN1 464 aa12.37□□□□□ -0.43
PHGDH-221ENST00000641573 PERM1Q5SV97 790 aa12.37□□□□□ -0.43
PHGDH-221ENST00000641573 WDR74Q6RFH5 385 aaPredicted RBP12.37□□□□□ -0.43
PHGDH-221ENST00000641573 PRSS41Q7RTY9 318 aa12.37□□□□□ -0.43
PHGDH-221ENST00000641573 PRSS42Q7Z5A4 293 aa12.37□□□□□ -0.43
PHGDH-221ENST00000641573 PACS2Q86VP3 889 aa12.37□□□□□ -0.43
PHGDH-221ENST00000641573 PDSS2Q86YH6 399 aa12.37□□□□□ -0.43
PHGDH-221ENST00000641573 CLEC4FQ8N1N0 589 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms