RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 ARL14Q8N4G2 192 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 ZCCHC10Q8TBK6 192 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 CYGBQ8WWM9 190 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 CNRIP1Q96F85 164 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-208ENST00000641023 RDH12Q96NR8 316 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-208ENST00000641023 MS4A12Q9NXJ0 267 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 IFT80Q9P2H3 777 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-208ENST00000641023 PHF11Q9UIL8 331 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 POMT2Q9UKY4 750 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 PCDHGB5Q9Y5G0 923 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 ZNF780BQ9Y6R6 833 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 TDRD6O60522 2096 aaKnown RBP16.34■□□□□ 0.21
PHGDH-208ENST00000641023 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 DPPA5A6NC42 116 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 P2RX6O15547 441 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 B3GALT2O43825 422 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 UBXN7O94888 489 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 ALBP02768 609 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 NR2F6P10588 404 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 CSNK2A2P19784 350 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-208ENST00000641023 DCTP40126 519 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 MAZP56270 477 aaKnown RBP16.34■□□□□ 0.21
PHGDH-208ENST00000641023 NXPH1P58417 271 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 KCNJ10P78508 379 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 VLDLRP98155 873 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 DEFB134Q4QY38 66 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 REEP3Q6NUK4 255 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 ZNF438Q7Z4V0 828 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 TMEFF1Q8IYR6 380 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 CCDC116Q8IYX3 515 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 HORMAD2Q8N7B1 307 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 C1orf216Q8TAB5 229 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 OSBPL10Q9BXB5 764 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 PNPLA3Q9NST1 481 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 ABCG2Q9UNQ0 655 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 MAGED1Q9Y5V3 778 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-208ENST00000641023 U3KQV3 271 aa16.34■□□□□ 0.21
PHGDH-208ENST00000641023 C19orf67A6NJJ6 358 aa16.33■□□□□ 0.21
PHGDH-208ENST00000641023 C5orf58C9J3I9 102 aa16.33■□□□□ 0.21
PHGDH-208ENST00000641023 hCG_2039718K7EN88 272 aa16.33■□□□□ 0.21
PHGDH-208ENST00000641023 K7ESF4 209 aa16.33■□□□□ 0.21
PHGDH-208ENST00000641023 AQP9O43315 295 aa16.33■□□□□ 0.21
PHGDH-208ENST00000641023 PRAMEF10O60809 474 aa16.33■□□□□ 0.21
PHGDH-208ENST00000641023 SNAP29O95721 258 aa16.33■□□□□ 0.21
PHGDH-208ENST00000641023 ALOX12P18054 663 aa16.33■□□□□ 0.21
PHGDH-208ENST00000641023 TLX1P31314 330 aaPredicted RBP16.33■□□□□ 0.21
PHGDH-208ENST00000641023 CAPGP40121 348 aa16.33■□□□□ 0.21
PHGDH-208ENST00000641023 RPS26P62854 115 aaKnown RBP16.33■□□□□ 0.21
PHGDH-208ENST00000641023 MYBPC1Q00872 1141 aa16.33■□□□□ 0.21
PHGDH-208ENST00000641023 EPS8Q12929 822 aa16.33■□□□□ 0.21
PHGDH-208ENST00000641023 SIM2Q14190 667 aaPredicted RBP16.33■□□□□ 0.21
PHGDH-208ENST00000641023 CEBPEQ15744 281 aa16.33■□□□□ 0.21
PHGDH-208ENST00000641023 TNFAIP8L2Q6P589 184 aaPredicted RBP16.33■□□□□ 0.21
PHGDH-208ENST00000641023 TMEM64Q6YI46 380 aa16.33■□□□□ 0.21
PHGDH-208ENST00000641023 SZRD1Q7Z422 152 aa16.33■□□□□ 0.21
PHGDH-208ENST00000641023 PATL1Q86TB9 770 aaKnown RBP16.33■□□□□ 0.21
PHGDH-208ENST00000641023 MOAP1Q96BY2 351 aa16.33■□□□□ 0.21
PHGDH-208ENST00000641023 SEMA6CQ9H3T2 930 aa16.33■□□□□ 0.21
PHGDH-208ENST00000641023 UCK1Q9HA47 277 aa16.33■□□□□ 0.21
PHGDH-208ENST00000641023 A4GALTQ9NPC4 353 aa16.33■□□□□ 0.21
PHGDH-208ENST00000641023 ZCCHC3Q9NUD5 404 aaKnown RBP16.33■□□□□ 0.21
PHGDH-208ENST00000641023 PADI2Q9Y2J8 665 aa16.33■□□□□ 0.21
PHGDH-208ENST00000641023 USP34Q70CQ2 3546 aa16.33■□□□□ 0.2
PHGDH-208ENST00000641023 TMEM247A6NEH6 219 aa16.33■□□□□ 0.2
PHGDH-208ENST00000641023 H0YAE9 185 aa16.33■□□□□ 0.2
PHGDH-208ENST00000641023 CDH3P22223 829 aa16.33■□□□□ 0.2
PHGDH-208ENST00000641023 CPN2P22792 545 aa16.33■□□□□ 0.2
PHGDH-208ENST00000641023 MYF6P23409 242 aa16.33■□□□□ 0.2
PHGDH-208ENST00000641023 PCBP3P57721 371 aaKnown RBP16.33■□□□□ 0.2
PHGDH-208ENST00000641023 PPP2R2BQ00005 443 aa16.33■□□□□ 0.2
PHGDH-208ENST00000641023 OR52E8Q6IFG1 317 aa16.33■□□□□ 0.2
PHGDH-208ENST00000641023 DGLUCYQ7Z3D6 616 aa16.33■□□□□ 0.2
PHGDH-208ENST00000641023 APLFQ8IW19 511 aaPredicted RBP16.33■□□□□ 0.2
PHGDH-208ENST00000641023 SAMD14Q8IZD0 417 aaPredicted RBP16.33■□□□□ 0.2
PHGDH-208ENST00000641023 SUN3Q8TAQ9 357 aa16.33■□□□□ 0.2
PHGDH-208ENST00000641023 DNASE2BQ8WZ79 361 aa16.33■□□□□ 0.2
PHGDH-208ENST00000641023 SLC38A3Q99624 504 aa16.33■□□□□ 0.2
PHGDH-208ENST00000641023 CCDC3Q9BQI4 270 aa16.33■□□□□ 0.2
PHGDH-208ENST00000641023 IER2Q9BTL4 223 aa16.33■□□□□ 0.2
PHGDH-208ENST00000641023 USE1Q9NZ43 259 aa16.33■□□□□ 0.2
PHGDH-208ENST00000641023 DAPP1Q9UN19 280 aa16.33■□□□□ 0.2
PHGDH-208ENST00000641023 OPN1SWP03999 348 aa16.32■□□□□ 0.2
PHGDH-208ENST00000641023 C8orf89P0DMQ9 161 aa16.32■□□□□ 0.2
PHGDH-208ENST00000641023 THRBP10828 461 aa16.32■□□□□ 0.2
PHGDH-208ENST00000641023 BCKDHBP21953 392 aa16.32■□□□□ 0.2
PHGDH-208ENST00000641023 DNAJA1P31689 397 aaKnown RBP16.32■□□□□ 0.2
PHGDH-208ENST00000641023 FEN1P39748 380 aaKnown RBP16.32■□□□□ 0.2
PHGDH-208ENST00000641023 MAGEA8P43361 318 aa16.32■□□□□ 0.2
PHGDH-208ENST00000641023 C21orf59P57076 290 aa16.32■□□□□ 0.2
PHGDH-208ENST00000641023 PPP1CAP62136 330 aa16.32■□□□□ 0.2
PHGDH-208ENST00000641023 TNFRSF17Q02223 184 aa16.32■□□□□ 0.2
PHGDH-208ENST00000641023 PPP1R8Q12972 351 aaKnown RBP16.32■□□□□ 0.2
PHGDH-208ENST00000641023 WDR45BQ5MNZ6 344 aa16.32■□□□□ 0.2
PHGDH-208ENST00000641023 SHQ1Q6PI26 577 aaKnown RBP16.32■□□□□ 0.2
PHGDH-208ENST00000641023 SPPL2AQ8TCT8 520 aa16.32■□□□□ 0.2
PHGDH-208ENST00000641023 SLC38A5Q8WUX1 472 aa16.32■□□□□ 0.2
PHGDH-208ENST00000641023 TAMM41Q96BW9 452 aa16.32■□□□□ 0.2
PHGDH-208ENST00000641023 SLC35G5Q96KT7 338 aa16.32■□□□□ 0.2
PHGDH-208ENST00000641023 C7orf34Q96L11 122 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms