RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 ANKRD10Q9NXR5 420 aa12.87□□□□□ -0.35
HLA-C-210ENST00000640219 LRFN1Q9P244 771 aa12.87□□□□□ -0.35
HLA-C-210ENST00000640219 NKX1-2Q9UD57 310 aaPredicted RBP12.87□□□□□ -0.35
HLA-C-210ENST00000640219 MKL2Q9ULH7 1088 aa12.87□□□□□ -0.35
HLA-C-210ENST00000640219 FN1P02751 2386 aaKnown RBP12.87□□□□□ -0.35
HLA-C-210ENST00000640219 NCF1BA6NI72 391 aaPredicted RBP12.86□□□□□ -0.35
HLA-C-210ENST00000640219 NCF1CA8MVU1 366 aaPredicted RBP12.86□□□□□ -0.35
HLA-C-210ENST00000640219 H0Y3Z8 333 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 SRPX2O60687 465 aaPredicted RBP12.86□□□□□ -0.35
HLA-C-210ENST00000640219 HSPA4LO95757 839 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 ALDOAP04075 364 aaKnown RBP12.86□□□□□ -0.35
HLA-C-210ENST00000640219 HEXAP06865 529 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 TPOP07202 933 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 C8GP07360 202 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 CDH1P12830 882 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 NCF1P14598 390 aaPredicted RBP12.86□□□□□ -0.35
HLA-C-210ENST00000640219 ATP6V1C1P21283 382 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 CD96P40200 585 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 ST13P50502 369 aaKnown RBP12.86□□□□□ -0.35
HLA-C-210ENST00000640219 PRDX1Q06830 199 aaKnown RBP12.86□□□□□ -0.35
HLA-C-210ENST00000640219 ARHGAP19Q14CB8 494 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 OR1C1Q15619 314 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 TSNQ15631 228 aaKnown RBP12.86□□□□□ -0.35
HLA-C-210ENST00000640219 PPP1R3AQ16821 1122 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 SYT16Q17RD7 645 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 SPINK14Q6IE38 97 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 PRSS41Q7RTY9 318 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 GALNTL5Q7Z4T8 443 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 CD163Q86VB7 1156 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 FAM57AQ8TBR7 257 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 MCOLN3Q8TDD5 553 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 DNAJC9Q8WXX5 260 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 ISL2Q96A47 359 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 ZUFSPQ96AP4 578 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 MBD6Q96DN6 1003 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 CMTM5Q96DZ9 223 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 IMMP1LQ96LU5 166 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 CCDC138Q96M89 665 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 OR4K3Q96R72 315 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 GPATCH1Q9BRR8 931 aaKnown RBP12.86□□□□□ -0.35
HLA-C-210ENST00000640219 UTP23Q9BRU9 249 aaKnown RBP12.86□□□□□ -0.35
HLA-C-210ENST00000640219 CCDC106Q9BWC9 280 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 CLEC4MQ9H2X3 399 aaPredicted RBP12.86□□□□□ -0.35
HLA-C-210ENST00000640219 SNX15Q9NRS6 342 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 C14orf105Q9NVL8 296 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 ARL15Q9NXU5 204 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 ARMCX1Q9P291 453 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 TRPC4Q9UBN4 977 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 MARCOQ9UEW3 520 aaPredicted RBP12.86□□□□□ -0.35
HLA-C-210ENST00000640219 RUVBL1Q9Y265 456 aaKnown RBP12.86□□□□□ -0.35
HLA-C-210ENST00000640219 COL6A5A8TX70 2615 aa12.86□□□□□ -0.35
HLA-C-210ENST00000640219 TARM1B6A8C7 271 aa12.85□□□□□ -0.35
HLA-C-210ENST00000640219 EIF3FO00303 357 aaPredicted RBP12.85□□□□□ -0.35
HLA-C-210ENST00000640219 KLK8O60259 260 aa12.85□□□□□ -0.35
HLA-C-210ENST00000640219 FKBP6O75344 327 aa12.85□□□□□ -0.35
HLA-C-210ENST00000640219 ENTPD5O75356 428 aa12.85□□□□□ -0.35
HLA-C-210ENST00000640219 WISP3O95389 354 aaPredicted RBP12.85□□□□□ -0.35
HLA-C-210ENST00000640219 ACADSP16219 412 aa12.85□□□□□ -0.35
HLA-C-210ENST00000640219 PRDX6P30041 224 aa12.85□□□□□ -0.35
HLA-C-210ENST00000640219 PTGS2P35354 604 aa12.85□□□□□ -0.35
HLA-C-210ENST00000640219 PTDSS1P48651 473 aaKnown RBP12.85□□□□□ -0.35
HLA-C-210ENST00000640219 SP140Q13342 867 aa12.85□□□□□ -0.35
HLA-C-210ENST00000640219 KPNB1Q14974 876 aaKnown RBP12.85□□□□□ -0.35
HLA-C-210ENST00000640219 RCN1Q15293 331 aa12.85□□□□□ -0.35
HLA-C-210ENST00000640219 VN1R4Q7Z5H5 301 aa12.85□□□□□ -0.35
HLA-C-210ENST00000640219 CCDC71Q8IV32 467 aaPredicted RBP12.85□□□□□ -0.35
HLA-C-210ENST00000640219 C10orf107Q8IVU9 208 aa12.85□□□□□ -0.35
HLA-C-210ENST00000640219 CSNK1A1LQ8N752 337 aa12.85□□□□□ -0.35
HLA-C-210ENST00000640219 ZNF740Q8NDX6 193 aa12.85□□□□□ -0.35
HLA-C-210ENST00000640219 ZCCHC10Q8TBK6 192 aa12.85□□□□□ -0.35
HLA-C-210ENST00000640219 EXT2Q93063 718 aa12.85□□□□□ -0.35
HLA-C-210ENST00000640219 ESAMQ96AP7 390 aa12.85□□□□□ -0.35
HLA-C-210ENST00000640219 OR2A5Q96R48 311 aa12.85□□□□□ -0.35
HLA-C-210ENST00000640219 STX18Q9P2W9 335 aaKnown RBP12.85□□□□□ -0.35
HLA-C-210ENST00000640219 KLK4Q9Y5K2 254 aa12.85□□□□□ -0.35
HLA-C-210ENST00000640219 HRH3Q9Y5N1 445 aa12.85□□□□□ -0.35
HLA-C-210ENST00000640219 VPS13CQ709C8 3753 aa12.84□□□□□ -0.35
HLA-C-210ENST00000640219 FBN1P35555 2871 aaKnown RBP12.84□□□□□ -0.35
HLA-C-210ENST00000640219 A0A096LPK6 155 aa12.84□□□□□ -0.35
HLA-C-210ENST00000640219 FAM171A2A8MVW0 826 aa12.84□□□□□ -0.35
HLA-C-210ENST00000640219 SLCO1B7G3V0H7 640 aa12.84□□□□□ -0.35
HLA-C-210ENST00000640219 LCMT2O60294 686 aaKnown RBP12.84□□□□□ -0.35
HLA-C-210ENST00000640219 TRIM13O60858 407 aa12.84□□□□□ -0.35
HLA-C-210ENST00000640219 B3GALT4O96024 378 aa12.84□□□□□ -0.35
HLA-C-210ENST00000640219 SP1P08047 785 aa12.84□□□□□ -0.35
HLA-C-210ENST00000640219 COL6A2P12110 1019 aa12.84□□□□□ -0.35
HLA-C-210ENST00000640219 ZNF24P17028 368 aa12.84□□□□□ -0.35
HLA-C-210ENST00000640219 PTGER1P34995 402 aa12.84□□□□□ -0.35
HLA-C-210ENST00000640219 BCL6P41182 706 aa12.84□□□□□ -0.35
HLA-C-210ENST00000640219 GDF5P43026 501 aa12.84□□□□□ -0.35
HLA-C-210ENST00000640219 MAGEA12P43365 314 aa12.84□□□□□ -0.35
HLA-C-210ENST00000640219 MAT1AQ00266 395 aaKnown RBP12.84□□□□□ -0.35
HLA-C-210ENST00000640219 IRF9Q00978 393 aa12.84□□□□□ -0.35
HLA-C-210ENST00000640219 DLG1Q12959 904 aa12.84□□□□□ -0.35
HLA-C-210ENST00000640219 USP10Q14694 798 aaKnown RBP12.84□□□□□ -0.35
HLA-C-210ENST00000640219 PCLAFQ15004 111 aa12.84□□□□□ -0.35
HLA-C-210ENST00000640219 PRTGQ2VWP7 1150 aa12.84□□□□□ -0.35
HLA-C-210ENST00000640219 RNFT1Q5M7Z0 435 aa12.84□□□□□ -0.35
HLA-C-210ENST00000640219 CATSPEREQ5SY80 951 aa12.84□□□□□ -0.35
HLA-C-210ENST00000640219 METTL21CQ5VZV1 264 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms