RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 EEF1AKMT1Q8WVE0 214 aa16.57■□□□□ 0.24
CLN6-212ENST00000636020 GAL3ST3Q96A11 431 aa16.57■□□□□ 0.24
CLN6-212ENST00000636020 INTS12Q96CB8 462 aaKnown RBP16.57■□□□□ 0.24
CLN6-212ENST00000636020 ZNF597Q96LX8 424 aa16.57■□□□□ 0.24
CLN6-212ENST00000636020 RUNDC3BQ96NL0 473 aa16.57■□□□□ 0.24
CLN6-212ENST00000636020 REG4Q9BYZ8 158 aa16.57■□□□□ 0.24
CLN6-212ENST00000636020 UBQLN3Q9H347 655 aa16.57■□□□□ 0.24
CLN6-212ENST00000636020 IKBKGQ9Y6K9 419 aa16.57■□□□□ 0.24
CLN6-212ENST00000636020 MED12LQ86YW9 2145 aa16.57■□□□□ 0.24
CLN6-212ENST00000636020 CTAGE9A4FU28 777 aa16.56■□□□□ 0.24
CLN6-212ENST00000636020 AP3B1O00203 1094 aa16.56■□□□□ 0.24
CLN6-212ENST00000636020 SNPHO15079 494 aa16.56■□□□□ 0.24
CLN6-212ENST00000636020 LIASO43766 372 aa16.56■□□□□ 0.24
CLN6-212ENST00000636020 DIO3P55073 304 aa16.56■□□□□ 0.24
CLN6-212ENST00000636020 STXBP1P61764 594 aaKnown RBP16.56■□□□□ 0.24
CLN6-212ENST00000636020 DHX9Q08211 1270 aaKnown RBP16.56■□□□□ 0.24
CLN6-212ENST00000636020 ZNF470Q6ECI4 717 aa16.56■□□□□ 0.24
CLN6-212ENST00000636020 LRRC8EQ6NSJ5 796 aa16.56■□□□□ 0.24
CLN6-212ENST00000636020 PALM2Q8IXS6 379 aa16.56■□□□□ 0.24
CLN6-212ENST00000636020 DND1Q8IYX4 353 aaKnown RBP16.56■□□□□ 0.24
CLN6-212ENST00000636020 TMEM171Q8WVE6 324 aa16.56■□□□□ 0.24
CLN6-212ENST00000636020 ABTB1Q969K4 478 aaPredicted RBP16.56■□□□□ 0.24
CLN6-212ENST00000636020 QRFPRQ96P65 431 aa16.56■□□□□ 0.24
CLN6-212ENST00000636020 CSF3RQ99062 836 aa16.56■□□□□ 0.24
CLN6-212ENST00000636020 TM9SF2Q99805 663 aa16.56■□□□□ 0.24
CLN6-212ENST00000636020 AIF1LQ9BQI0 150 aa16.56■□□□□ 0.24
CLN6-212ENST00000636020 RBSNQ9H1K0 784 aa16.56■□□□□ 0.24
CLN6-212ENST00000636020 FBXO6Q9NRD1 293 aaPredicted RBP16.56■□□□□ 0.24
CLN6-212ENST00000636020 PAK5Q9P286 719 aa16.56■□□□□ 0.24
CLN6-212ENST00000636020 COPS7AQ9UBW8 275 aa16.56■□□□□ 0.24
CLN6-212ENST00000636020 AMFRQ9UKV5 643 aa16.56■□□□□ 0.24
CLN6-212ENST00000636020 WIF1Q9Y5W5 379 aa16.56■□□□□ 0.24
CLN6-212ENST00000636020 ANKRD33BA6NCL7 494 aa16.55■□□□□ 0.24
CLN6-212ENST00000636020 GOLGA6L19H0YKK7 550 aa16.55■□□□□ 0.24
CLN6-212ENST00000636020 B3GALT2O43825 422 aa16.55■□□□□ 0.24
CLN6-212ENST00000636020 TMCC2O75069 709 aa16.55■□□□□ 0.24
CLN6-212ENST00000636020 FBXO45P0C2W1 286 aa16.55■□□□□ 0.24
CLN6-212ENST00000636020 ZSCAN5DPP0CG00 497 aa16.55■□□□□ 0.24
CLN6-212ENST00000636020 HNRNPH1P31943 449 aaKnown RBP16.55■□□□□ 0.24
CLN6-212ENST00000636020 STX4Q12846 297 aa16.55■□□□□ 0.24
CLN6-212ENST00000636020 EFTUD2Q15029 972 aaKnown RBP eCLIP16.55■□□□□ 0.24
CLN6-212ENST00000636020 CLEC12BQ2HXU8 276 aa16.55■□□□□ 0.24
CLN6-212ENST00000636020 UGT3A1Q6NUS8 523 aa16.55■□□□□ 0.24
CLN6-212ENST00000636020 DENND6AQ8IWF6 608 aa16.55■□□□□ 0.24
CLN6-212ENST00000636020 C9orf40Q8IXQ3 194 aa16.55■□□□□ 0.24
CLN6-212ENST00000636020 GPATCH11Q8N954 259 aa16.55■□□□□ 0.24
CLN6-212ENST00000636020 LRRC57Q8N9N7 239 aa16.55■□□□□ 0.24
CLN6-212ENST00000636020 MS4A6EQ96DS6 147 aa16.55■□□□□ 0.24
CLN6-212ENST00000636020 CALR3Q96L12 384 aaKnown RBP16.55■□□□□ 0.24
CLN6-212ENST00000636020 TSNARE1Q96NA8 513 aa16.55■□□□□ 0.24
CLN6-212ENST00000636020 TUBA1CQ9BQE3 449 aa16.55■□□□□ 0.24
CLN6-212ENST00000636020 MED18Q9BUE0 208 aa16.55■□□□□ 0.24
CLN6-212ENST00000636020 C19orf24Q9BVV8 132 aa16.55■□□□□ 0.24
CLN6-212ENST00000636020 CXorf56Q9H5V9 222 aa16.55■□□□□ 0.24
CLN6-212ENST00000636020 PELI2Q9HAT8 420 aa16.55■□□□□ 0.24
CLN6-212ENST00000636020 PACSIN3Q9UKS6 424 aa16.55■□□□□ 0.24
CLN6-212ENST00000636020 COMMD10Q9Y6G5 202 aa16.55■□□□□ 0.24
CLN6-212ENST00000636020 ERI3O43414 337 aaKnown RBP16.54■□□□□ 0.24
CLN6-212ENST00000636020 HIST1H2AGP0C0S8 130 aaPredicted RBP16.54■□□□□ 0.24
CLN6-212ENST00000636020 CYP4B1P13584 511 aa16.54■□□□□ 0.24
CLN6-212ENST00000636020 HIST1H2ADP20671 130 aa16.54■□□□□ 0.24
CLN6-212ENST00000636020 SERPINB3P29508 390 aa16.54■□□□□ 0.24
CLN6-212ENST00000636020 CPOXP36551 454 aa16.54■□□□□ 0.24
CLN6-212ENST00000636020 LIM2P55344 173 aa16.54■□□□□ 0.24
CLN6-212ENST00000636020 VEZF1Q14119 521 aa16.54■□□□□ 0.24
CLN6-212ENST00000636020 SERTAD2Q14140 314 aa16.54■□□□□ 0.24
CLN6-212ENST00000636020 EIPR1Q53HC9 387 aa16.54■□□□□ 0.24
CLN6-212ENST00000636020 TBCELQ5QJ74 424 aa16.54■□□□□ 0.24
CLN6-212ENST00000636020 FNDC7Q5VTL7 733 aa16.54■□□□□ 0.24
CLN6-212ENST00000636020 NXPE4Q6UWF7 544 aa16.54■□□□□ 0.24
CLN6-212ENST00000636020 ADGRE4PQ86SQ3 457 aa16.54■□□□□ 0.24
CLN6-212ENST00000636020 KLHDC8AQ8IYD2 350 aa16.54■□□□□ 0.24
CLN6-212ENST00000636020 GCNT2Q8N0V5 402 aa16.54■□□□□ 0.24
CLN6-212ENST00000636020 SENP5Q96HI0 755 aaPredicted RBP16.54■□□□□ 0.24
CLN6-212ENST00000636020 HIST1H2AHQ96KK5 128 aa16.54■□□□□ 0.24
CLN6-212ENST00000636020 GNRHR2Q96P88 292 aa16.54■□□□□ 0.24
CLN6-212ENST00000636020 HIST1H2AJQ99878 128 aa16.54■□□□□ 0.24
CLN6-212ENST00000636020 H2AFJQ9BTM1 129 aa16.54■□□□□ 0.24
CLN6-212ENST00000636020 ARL15Q9NXU5 204 aa16.54■□□□□ 0.24
CLN6-212ENST00000636020 DAPP1Q9UN19 280 aa16.54■□□□□ 0.24
CLN6-212ENST00000636020 LRIT2A6NDA9 550 aa16.53■□□□□ 0.24
CLN6-212ENST00000636020 A8MV72 311 aaPredicted RBP16.53■□□□□ 0.24
CLN6-212ENST00000636020 BTNL10A8MVZ5 291 aa16.53■□□□□ 0.24
CLN6-212ENST00000636020 MSTNO14793 375 aa16.53■□□□□ 0.24
CLN6-212ENST00000636020 IGKV3-11P04433 115 aa16.53■□□□□ 0.24
CLN6-212ENST00000636020 CPN1P15169 458 aa16.53■□□□□ 0.24
CLN6-212ENST00000636020 PAMP19021 973 aa16.53■□□□□ 0.24
CLN6-212ENST00000636020 RPL21P46778 160 aaKnown RBP16.53■□□□□ 0.24
CLN6-212ENST00000636020 NAGLUP54802 743 aa16.53■□□□□ 0.24
CLN6-212ENST00000636020 EEF1A1P68104 462 aaKnown RBP16.53■□□□□ 0.24
CLN6-212ENST00000636020 TIAL1Q01085 375 aaKnown RBP eCLIP16.53■□□□□ 0.24
CLN6-212ENST00000636020 RUNX1T1Q06455 604 aa16.53■□□□□ 0.24
CLN6-212ENST00000636020 GAB1Q13480 694 aa16.53■□□□□ 0.24
CLN6-212ENST00000636020 EEF1A1P5Q5VTE0 462 aa16.53■□□□□ 0.24
CLN6-212ENST00000636020 VSTM4Q8IW00 320 aa16.53■□□□□ 0.24
CLN6-212ENST00000636020 CCDC89Q8N998 374 aa16.53■□□□□ 0.24
CLN6-212ENST00000636020 WNT2BQ93097 391 aa16.53■□□□□ 0.24
CLN6-212ENST00000636020 ANKRD9Q96BM1 317 aaPredicted RBP16.53■□□□□ 0.24
CLN6-212ENST00000636020 FBXL8Q96CD0 374 aa16.53■□□□□ 0.24
CLN6-212ENST00000636020 UCN2Q96RP3 112 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms