RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 ESCO2Q56NI9 601 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 YIPF4Q9BSR8 244 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 MTG2Q9H4K7 406 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 NDUFAF4Q9P032 175 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 LRCH4O75427 683 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 C7P10643 843 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 RPS3AP61247 264 aaKnown RBP12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 ARL6IP1Q15041 203 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 KIAA0907Q7Z7F0 614 aaPredicted RBP12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 ADAMTS18Q8TE60 1221 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 ADAMTS10Q9H324 1103 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 SALL3Q9BXA9 1300 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 GABBR2O75899 941 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 ACP5P13686 325 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 VIPR1P32241 457 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 LILRA4P59901 499 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 HTD2P86397 168 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 RHDQ02161 417 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 KLF1Q13351 362 aaPredicted RBP12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 SLC18B1Q6NT16 456 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 SLC27A4Q6P1M0 643 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 SLC51AQ86UW1 340 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 PSMG2Q969U7 264 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 MGAT4CQ9UBM8 478 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 KLHL33A6NCF5 533 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 SMAD9O15198 467 aaKnown RBP12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 LRRTM2O43300 516 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 ZNF821O75541 412 aaPredicted RBP12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 DUSP3P51452 185 aaPredicted RBP12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 THOC6Q86W42 341 aaKnown RBP12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 OR5H2Q8NGV7 314 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 ARL11Q969Q4 196 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 BMFQ96LC9 184 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 CHD5Q8TDI0 1954 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 A0A087WUU8 490 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 NARSO43776 548 aaKnown RBP12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 H2BFMP0C1H6 154 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 MAOAP21397 527 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 SKA3Q8IX90 412 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 AUTS2Q8WXX7 1259 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 CADM1Q9BY67 442 aaKnown RBP12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 NANSQ9NR45 359 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 FBXL12Q9NXK8 326 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 NME7Q9Y5B8 376 aa12.69□□□□□ -0.38
SYNGAP1-208ENST00000629380 MYO7BQ6PIF6 2116 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 POLR1CO15160 346 aaPredicted RBP12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 EEF1E1O43324 174 aaKnown RBP12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 VSX2P58304 361 aaPredicted RBP12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 PPP4R1LQ9P1A2 415 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 CPED1A4D0V7 1026 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 GABARAPL2P60520 117 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 ATXN7L3Q14CW9 347 aaPredicted RBP12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 TMEM205Q6UW68 189 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 SPTSSAQ969W0 71 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 ZNF442Q9H7R0 627 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 LIPT1Q9Y234 373 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 LRRC37A3O60309 1634 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 WASP42768 502 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 FNTBP49356 437 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 CARM1Q86X55 608 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 KCNH6Q9H252 994 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 TAC3Q9UHF0 121 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 MYO5AQ9Y4I1 1855 aaKnown RBP12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 C2CD4BA6NLJ0 364 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 SOX1O00570 391 aaPredicted RBP12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 CSKP41240 450 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 NIPAL3Q6P499 406 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 OR5AK3PQ8NH89 298 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 B3GNT5Q9BYG0 378 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 MANBAO00462 879 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 KHNYNO15037 678 aaKnown RBP12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 CASC3O15234 703 aaKnown RBP12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 BMP6P22004 513 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 MLLT1Q03111 559 aaPredicted RBP12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 GBX1Q14549 363 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 ZNF619Q8N2I2 560 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 ZNF559Q9BR84 538 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 HDHD5Q9BXW7 423 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 PCYT1BQ9Y5K3 369 aaPredicted RBP12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 CCDC163A0A0D9SF12 145 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 LCHNA4D1U4 455 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 TRIM46Q7Z4K8 759 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 ZNF610Q8N9Z0 462 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 DDIT4LQ96D03 193 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 RAB39BQ96DA2 213 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 BTBD2Q9BX70 525 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 PDE7BQ9NP56 450 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 DNAJC27Q9NZQ0 273 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 COL20A1Q9P218 1284 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 RFPL1O75677 317 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 ALDH3B1P43353 468 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 VEGFCP49767 419 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 PPP5CP53041 499 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 ENPP7Q6UWV6 458 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 HAVCR2Q8TDQ0 301 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 STK35Q8TDR2 534 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 TCTEX1D2Q8WW35 142 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 SNAPC3Q92966 411 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 TP53TG5Q9Y2B4 290 aa12.68□□□□□ -0.38
SYNGAP1-208ENST00000629380 A8MUA0 341 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms