RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 OR52E4Q8NGH9 312 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 SETD7Q8WTS6 366 aaKnown RBP8.56□□□□□ -1.04
VCL-206ENST00000623461 GAS2L1Q99501 681 aaPredicted RBP8.56□□□□□ -1.04
VCL-206ENST00000623461 GAL3ST1Q99999 423 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 SYT11Q9BT88 431 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 RIOK2Q9BVS4 552 aaKnown RBP8.56□□□□□ -1.04
VCL-206ENST00000623461 ASF1BQ9NVP2 202 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 SMCO3A2RU48 225 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 S1PR4O95977 384 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 SPATA31D3P0C874 917 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 ALPPL2P10696 532 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 GGT5P36269 586 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 MTNR1AP48039 350 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 TPMTP51580 245 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 FAPQ12884 760 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 ZMYND11Q15326 602 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 HES5Q5TA89 166 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 IDO2Q6ZQW0 420 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 SPATA31D4Q6ZUB0 917 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 ZDHHC14Q8IZN3 488 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 OR5P2Q8WZ92 322 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 RIT1Q92963 219 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 C7orf34Q96L11 122 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 SIAEQ9HAT2 523 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 MYBPHLA2RUH7 354 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 E7EQ34 232 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 GOSR2O14653 212 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 ALAS2P22557 587 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 CD34P28906 385 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 RBMXP38159 391 aaKnown RBP8.56□□□□□ -1.04
VCL-206ENST00000623461 KCNQ1P51787 676 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 SH3BP2P78314 561 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 OR7G3Q8NG95 312 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 OR8S1Q8NH09 359 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 TRMT10AQ8TBZ6 339 aaKnown RBP8.56□□□□□ -1.04
VCL-206ENST00000623461 DPYSL5Q9BPU6 564 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 NENFQ9UMX5 172 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 GXYLT2A0PJZ3 443 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 SLC16A5O15375 505 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 ARPC5O15511 151 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 TYRP14679 529 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 M6PRP20645 277 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 ACTBP60709 375 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 ACTG1P63261 375 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 DNM1P34Q6PK57 102 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 KRTCAP2Q8N6L1 136 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 OR2AJ1Q8NGZ0 328 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 OR5B12Q96R08 314 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 NSUN3Q9H649 340 aaKnown RBP8.55□□□□□ -1.04
VCL-206ENST00000623461 GSKIPQ9P0R6 139 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 FBXL3Q9UKT7 428 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 NAALAD2Q9Y3Q0 740 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 TTC24A2A3L6 582 aaPredicted RBP8.55□□□□□ -1.04
VCL-206ENST00000623461 B4GAT1O43505 415 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 ALPLP05186 524 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 MAOAP21397 527 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 GAS6Q14393 721 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 NHSL2Q5HYW2 709 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 LINGO4Q6UY18 593 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 KLBQ86Z14 1044 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 FOXRED2Q8IWF2 684 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 TMEM185AQ8NFB2 350 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 NETO1Q8TDF5 533 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 TESCQ96BS2 214 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 PHB2Q99623 299 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 ZNF649Q9BS31 505 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 SLC6A16Q9GZN6 736 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 NTN4Q9HB63 628 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 IGSF5Q9NSI5 407 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 CPA4Q9UI42 421 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 PCDHB14Q9Y5E9 798 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 KLK4Q9Y5K2 254 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 TEX13DA0A0J9YY54 714 aaPredicted RBP8.55□□□□□ -1.04
VCL-206ENST00000623461 ZNF878C9JN71 531 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 PDHXO00330 501 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 RPP14O95059 124 aaKnown RBP8.55□□□□□ -1.04
VCL-206ENST00000623461 CAPZA1P52907 286 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 RAP2BP61225 183 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 NKX6-1P78426 367 aaPredicted RBP8.55□□□□□ -1.04
VCL-206ENST00000623461 OR1J4Q8NGS1 313 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 TERB2Q8NHR7 220 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 FKBP10Q96AY3 582 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 ELP4Q96EB1 424 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 HDHD5Q9BXW7 423 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 PRMT8Q9NR22 394 aaPredicted RBP8.55□□□□□ -1.04
VCL-206ENST00000623461 IMP3Q9NV31 184 aaKnown RBP8.55□□□□□ -1.04
VCL-206ENST00000623461 UGT2A1Q9Y4X1 527 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 UBFD1O14562 309 aaKnown RBP8.55□□□□□ -1.04
VCL-206ENST00000623461 B3GALT2O43825 422 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 SLC43A1O75387 559 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 SULT1C4O75897 302 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 PCSK6P29122 969 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 CNR2P34972 360 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 DGKEP52429 567 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 RRAS2P62070 204 aaPredicted RBP8.55□□□□□ -1.04
VCL-206ENST00000623461 INAVAQ3KP66 663 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 SFRP4Q6FHJ7 346 aaPredicted RBP8.55□□□□□ -1.04
VCL-206ENST00000623461 NRARPQ7Z6K4 114 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 OR5T3Q8NGG3 340 aa8.55□□□□□ -1.04
VCL-206ENST00000623461 COQ8BQ96D53 544 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms