RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 NFKBIDQ8NI38 313 aa20.27■□□□□ 0.83
SPAST-204ENST00000621856 PSMA8Q8TAA3 256 aa20.27■□□□□ 0.83
SPAST-204ENST00000621856 KLHL6Q8WZ60 621 aa20.27■□□□□ 0.83
SPAST-204ENST00000621856 PIGKQ92643 395 aa20.27■□□□□ 0.83
SPAST-204ENST00000621856 BTBD9Q96Q07 612 aa20.27■□□□□ 0.83
SPAST-204ENST00000621856 BDH2Q9BUT1 245 aa20.27■□□□□ 0.83
SPAST-204ENST00000621856 TMEM38AQ9H6F2 299 aa20.27■□□□□ 0.83
SPAST-204ENST00000621856 SEMA3GQ9NS98 782 aa20.27■□□□□ 0.83
SPAST-204ENST00000621856 KCMF1Q9P0J7 381 aa20.27■□□□□ 0.83
SPAST-204ENST00000621856 DAPP1Q9UN19 280 aa20.27■□□□□ 0.83
SPAST-204ENST00000621856 TECTAO75443 2155 aa20.26■□□□□ 0.83
SPAST-204ENST00000621856 TLCD2A6NGC4 264 aa20.26■□□□□ 0.83
SPAST-204ENST00000621856 UQCRBP14927 111 aa20.26■□□□□ 0.83
SPAST-204ENST00000621856 ZNF26P17031 533 aaPredicted RBP20.26■□□□□ 0.83
SPAST-204ENST00000621856 HOXB6P17509 224 aaKnown RBP20.26■□□□□ 0.83
SPAST-204ENST00000621856 AQP1P29972 269 aa20.26■□□□□ 0.83
SPAST-204ENST00000621856 MLLT3P42568 568 aaPredicted RBP20.26■□□□□ 0.83
SPAST-204ENST00000621856 TP53BP2Q13625 1128 aa20.26■□□□□ 0.83
SPAST-204ENST00000621856 SHBQ15464 509 aa20.26■□□□□ 0.83
SPAST-204ENST00000621856 NRF1Q16656 503 aa20.26■□□□□ 0.83
SPAST-204ENST00000621856 PRSS41Q7RTY9 318 aa20.26■□□□□ 0.83
SPAST-204ENST00000621856 ZC3H7AQ8IWR0 971 aaKnown RBP20.26■□□□□ 0.83
SPAST-204ENST00000621856 CCDC116Q8IYX3 515 aa20.26■□□□□ 0.83
SPAST-204ENST00000621856 DNAJC22Q8N4W6 341 aa20.26■□□□□ 0.83
SPAST-204ENST00000621856 OR10Q1Q8NGQ4 319 aa20.26■□□□□ 0.83
SPAST-204ENST00000621856 ZDHHC12Q96GR4 267 aa20.26■□□□□ 0.83
SPAST-204ENST00000621856 C9orf16Q9BUW7 83 aa20.26■□□□□ 0.83
SPAST-204ENST00000621856 LYRM4Q9HD34 91 aa20.26■□□□□ 0.83
SPAST-204ENST00000621856 SOHLH2Q9NX45 425 aa20.26■□□□□ 0.83
SPAST-204ENST00000621856 MS4A12Q9NXJ0 267 aa20.26■□□□□ 0.83
SPAST-204ENST00000621856 NAALAD2Q9Y3Q0 740 aa20.26■□□□□ 0.83
SPAST-204ENST00000621856 SPACA6W5XKT8 324 aa20.26■□□□□ 0.83
SPAST-204ENST00000621856 NUDT21O43809 227 aaKnown RBP20.25■□□□□ 0.83
SPAST-204ENST00000621856 ALPPL2P10696 532 aa20.25■□□□□ 0.83
SPAST-204ENST00000621856 MPIP34949 423 aa20.25■□□□□ 0.83
SPAST-204ENST00000621856 HSPA13P48723 471 aa20.25■□□□□ 0.83
SPAST-204ENST00000621856 OR1D5P58170 312 aa20.25■□□□□ 0.83
SPAST-204ENST00000621856 RPS26P62854 115 aaKnown RBP20.25■□□□□ 0.83
SPAST-204ENST00000621856 CDK6Q00534 326 aa20.25■□□□□ 0.83
SPAST-204ENST00000621856 ZNF630Q2M218 657 aaPredicted RBP20.25■□□□□ 0.83
SPAST-204ENST00000621856 SWT1Q5T5J6 900 aaKnown RBP20.25■□□□□ 0.83
SPAST-204ENST00000621856 INTS11Q5TA45 600 aaKnown RBP20.25■□□□□ 0.83
SPAST-204ENST00000621856 OR52E8Q6IFG1 317 aa20.25■□□□□ 0.83
SPAST-204ENST00000621856 CEACAM20Q6UY09 585 aa20.25■□□□□ 0.83
SPAST-204ENST00000621856 CEP68Q76N32 757 aa20.25■□□□□ 0.83
SPAST-204ENST00000621856 EIF3MQ7L2H7 374 aaKnown RBP20.25■□□□□ 0.83
SPAST-204ENST00000621856 MAGED4Q96JG8 741 aa20.25■□□□□ 0.83
SPAST-204ENST00000621856 KLHL3Q9UH77 587 aa20.25■□□□□ 0.83
SPAST-204ENST00000621856 OAZ3Q9UMX2 235 aa20.25■□□□□ 0.83
SPAST-204ENST00000621856 SLC22A7Q9Y694 548 aa20.25■□□□□ 0.83
SPAST-204ENST00000621856 TMEM221A6NGB7 291 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 M0R296 226 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 HRO43593 1189 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 SRPX2O60687 465 aaPredicted RBP20.24■□□□□ 0.83
SPAST-204ENST00000621856 GALR3O60755 368 aaPredicted RBP20.24■□□□□ 0.83
SPAST-204ENST00000621856 DNAJB6O75190 326 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 ARAFP10398 606 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 DUSP2Q05923 314 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 TMTC4Q5T4D3 741 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 TNFAIP8L2Q6P589 184 aaPredicted RBP20.24■□□□□ 0.83
SPAST-204ENST00000621856 TLDC1Q6P9B6 456 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 CBLL1Q75N03 491 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 HORMAD2Q8N7B1 307 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 SUN3Q8TAQ9 357 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 SLC35G5Q96KT7 338 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 CSF3RQ99062 836 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 CD180Q99467 661 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 SLC29A1Q99808 456 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 RAB33BQ9H082 229 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 ANKHQ9HCJ1 492 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 ZCCHC3Q9NUD5 404 aaKnown RBP20.24■□□□□ 0.83
SPAST-204ENST00000621856 IRAK4Q9NWZ3 460 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 ADPRHL2Q9NX46 363 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 EPHA6Q9UF33 1036 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 ANGPT4Q9Y264 503 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 SOCS2O14508 198 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 CST1P01037 141 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 CTSBP07858 339 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 GIMD1P0DJR0 217 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 GLB1P16278 677 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 PTGER1P34995 402 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 SIM1P81133 766 aaPredicted RBP20.24■□□□□ 0.83
SPAST-204ENST00000621856 FOLH1Q04609 750 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 PPP4R4Q6NUP7 873 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 EPHX4Q8IUS5 362 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 CBR4Q8N4T8 237 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 C10orf90Q96M02 699 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 ASPSCR1Q9BZE9 553 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 Q9H521 79 aa20.24■□□□□ 0.83
SPAST-204ENST00000621856 IGHV1OR21-1A0A087WYE8 117 aa20.23■□□□□ 0.83
SPAST-204ENST00000621856 IGHV5-51A0A0C4DH38 117 aa20.23■□□□□ 0.83
SPAST-204ENST00000621856 A0A1W2PS29 197 aa20.23■□□□□ 0.83
SPAST-204ENST00000621856 PDLIM1O00151 329 aa20.23■□□□□ 0.83
SPAST-204ENST00000621856 GNGT2O14610 69 aa20.23■□□□□ 0.83
SPAST-204ENST00000621856 B4GALT2O60909 372 aa20.23■□□□□ 0.83
SPAST-204ENST00000621856 MYF5P13349 255 aa20.23■□□□□ 0.83
SPAST-204ENST00000621856 ZNF23P17027 643 aa20.23■□□□□ 0.83
SPAST-204ENST00000621856 EPHA8P29322 1005 aaPredicted RBP20.23■□□□□ 0.83
SPAST-204ENST00000621856 AMZ1Q400G9 498 aa20.23■□□□□ 0.83
SPAST-204ENST00000621856 CYBRD1Q53TN4 286 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms