RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 SNX7Q9UNH6 387 aa6.65□□□□□ -1.35
NEDD9-216ENST00000620854 BACE2Q9Y5Z0 518 aa6.65□□□□□ -1.35
NEDD9-216ENST00000620854 TRBV23OR9-2A0A075B6M9 112 aa6.65□□□□□ -1.35
NEDD9-216ENST00000620854 C1QTNF3-AMACRE9PGA6 284 aa6.65□□□□□ -1.35
NEDD9-216ENST00000620854 PLK4O00444 970 aa6.65□□□□□ -1.35
NEDD9-216ENST00000620854 SPTBP11277 2137 aa6.65□□□□□ -1.35
NEDD9-216ENST00000620854 BMP7P18075 431 aa6.65□□□□□ -1.35
NEDD9-216ENST00000620854 PRPS1L1P21108 318 aa6.65□□□□□ -1.35
NEDD9-216ENST00000620854 PTNP21246 168 aa6.65□□□□□ -1.35
NEDD9-216ENST00000620854 CCR7P32248 378 aa6.65□□□□□ -1.35
NEDD9-216ENST00000620854 HMGCLP35914 325 aa6.65□□□□□ -1.35
NEDD9-216ENST00000620854 SSR2P43308 183 aa6.65□□□□□ -1.35
NEDD9-216ENST00000620854 KIR2DL3P43628 341 aa6.65□□□□□ -1.35
NEDD9-216ENST00000620854 IL18Q14116 193 aa6.65□□□□□ -1.35
NEDD9-216ENST00000620854 RGNQ15493 299 aa6.65□□□□□ -1.35
NEDD9-216ENST00000620854 TATDN3Q17R31 274 aa6.65□□□□□ -1.35
NEDD9-216ENST00000620854 AKIRIN2Q53H80 203 aa6.65□□□□□ -1.35
NEDD9-216ENST00000620854 SLX4IPQ5VYV7 408 aa6.65□□□□□ -1.35
NEDD9-216ENST00000620854 TNFAIP8L2Q6P589 184 aaPredicted RBP6.65□□□□□ -1.35
NEDD9-216ENST00000620854 TSEN54Q7Z6J9 526 aaKnown RBP6.65□□□□□ -1.35
NEDD9-216ENST00000620854 GHDCQ8N2G8 530 aa6.65□□□□□ -1.35
NEDD9-216ENST00000620854 RAD51AP1Q96B01 352 aa6.65□□□□□ -1.35
NEDD9-216ENST00000620854 RIPOR3Q96MK2 946 aa6.65□□□□□ -1.35
NEDD9-216ENST00000620854 SLC38A2Q96QD8 506 aa6.65□□□□□ -1.35
NEDD9-216ENST00000620854 SIGLEC11Q96RL6 698 aa6.65□□□□□ -1.35
NEDD9-216ENST00000620854 P2RY13Q9BPV8 354 aa6.65□□□□□ -1.35
NEDD9-216ENST00000620854 NTMT1Q9BV86 223 aa6.65□□□□□ -1.35
NEDD9-216ENST00000620854 TMEM138Q9NPI0 162 aa6.65□□□□□ -1.35
NEDD9-216ENST00000620854 IMP3Q9NV31 184 aaKnown RBP6.65□□□□□ -1.35
NEDD9-216ENST00000620854 FBXL21Q9UKT6 434 aa6.65□□□□□ -1.35
NEDD9-216ENST00000620854 PCDHGA2Q9Y5H1 932 aa6.65□□□□□ -1.35
NEDD9-216ENST00000620854 SESN1Q9Y6P5 492 aa6.65□□□□□ -1.35
NEDD9-216ENST00000620854 LOC102723532A0A0G2JNH3 316 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 GSAPA4D1B5 854 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 KDELR3O43731 214 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 TLX2O43763 284 aaPredicted RBP6.64□□□□□ -1.35
NEDD9-216ENST00000620854 OR5F1O95221 314 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 ELFN1P0C7U0 828 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 BPIP17213 487 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 GPX2P18283 190 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 CR2P20023 1033 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 CHMP24386 653 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 RAB8AP61006 207 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 DEFB103AP81534 67 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 MEF2AQ02078 507 aaPredicted RBP6.64□□□□□ -1.35
NEDD9-216ENST00000620854 PCDH1Q08174 1060 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 TGM3Q08188 693 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 C5orf22Q49AR2 442 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 FBXO43Q4G163 708 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 FAM26DQ5JW98 314 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 C9orf64Q5T6V5 341 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 OR2G6Q5TZ20 316 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 CERS6Q6ZMG9 384 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 CIDECQ96AQ7 238 aaPredicted RBP6.64□□□□□ -1.35
NEDD9-216ENST00000620854 SLC22A4Q9H015 551 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 HHATLQ9HCP6 504 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 SEMA3GQ9NS98 782 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 VPS29Q9UBQ0 182 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 NCKAP1Q9Y2A7 1128 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 PCDHB1Q9Y5F3 818 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 SPIN1Q9Y657 262 aaPredicted RBP6.64□□□□□ -1.35
NEDD9-216ENST00000620854 A0A0B4J293 547 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 PRAMEF33A0A0G2JMD5 474 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 PRAMEF25A6NGN4 478 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 HMX3A6NHT5 357 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 ISM1B1AKI9 464 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 B4DXG7 233 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 TMEM189-UBE2V1I3L0A0 370 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 BTN3A3O00478 584 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 TEX28O15482 410 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 PRAMEF10O60809 474 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 OR2B3O76000 313 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 NCR1O76036 304 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 ETHE1O95571 254 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 C6orf47O95873 294 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 ENDOUP21128 410 aaKnown RBP6.64□□□□□ -1.35
NEDD9-216ENST00000620854 RPL4P36578 427 aaKnown RBP6.64□□□□□ -1.35
NEDD9-216ENST00000620854 OR3A3P47888 321 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 WNT3P56703 355 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 WDR5P61964 334 aaKnown RBP6.64□□□□□ -1.35
NEDD9-216ENST00000620854 SELENOWP63302 87 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 HSPB3Q12988 150 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 MICAQ29983 383 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 SIGIRRQ6IA17 410 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 CXorf57Q6NSI4 855 aaKnown RBP6.64□□□□□ -1.35
NEDD9-216ENST00000620854 RSPO2Q6UXX9 243 aaPredicted RBP6.64□□□□□ -1.35
NEDD9-216ENST00000620854 ASB18Q6ZVZ8 466 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 ATCAYQ86WG3 371 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 RNF130Q86XS8 419 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 PLPP6Q8IY26 295 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 CPA6Q8N4T0 437 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 LRRC17Q8N6Y2 441 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 NLGN4YQ8NFZ3 816 aaPredicted RBP6.64□□□□□ -1.35
NEDD9-216ENST00000620854 TEX47Q8TBZ9 253 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 ARMC5Q96C12 935 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 RNF31Q96EP0 1072 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 OPALINQ96PE5 141 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 PITX2Q99697 317 aa6.64□□□□□ -1.35
NEDD9-216ENST00000620854 WRAP53Q9BUR4 548 aaKnown RBP6.64□□□□□ -1.35
NEDD9-216ENST00000620854 GABARAPL1Q9H0R8 117 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms