RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 MMABQ96EY8 250 aaPredicted RBP7.57□□□□□ -1.2
PCDH9-205ENST00000614931 NSL1Q96IY1 281 aa7.57□□□□□ -1.2
PCDH9-205ENST00000614931 GBP5Q96PP8 586 aa7.57□□□□□ -1.2
PCDH9-205ENST00000614931 NPAS2Q99743 824 aa7.57□□□□□ -1.2
PCDH9-205ENST00000614931 ROGDIQ9GZN7 287 aa7.57□□□□□ -1.2
PCDH9-205ENST00000614931 ACTR5Q9H9F9 607 aaPredicted RBP7.57□□□□□ -1.2
PCDH9-205ENST00000614931 LYRM4Q9HD34 91 aa7.57□□□□□ -1.2
PCDH9-205ENST00000614931 SERHLQ9NQF3 203 aa7.57□□□□□ -1.2
PCDH9-205ENST00000614931 SLC6A13Q9NSD5 602 aa7.57□□□□□ -1.2
PCDH9-205ENST00000614931 SLC39A1Q9NY26 324 aa7.57□□□□□ -1.2
PCDH9-205ENST00000614931 MAP10Q9P2G4 905 aa7.57□□□□□ -1.2
PCDH9-205ENST00000614931 NDOR1Q9UHB4 597 aa7.57□□□□□ -1.2
PCDH9-205ENST00000614931 SERTAD3Q9UJW9 196 aa7.57□□□□□ -1.2
PCDH9-205ENST00000614931 ERVK-11Q9UQG0 969 aa7.57□□□□□ -1.2
PCDH9-205ENST00000614931 PCDHB3Q9Y5E6 796 aa7.57□□□□□ -1.2
PCDH9-205ENST00000614931 CLDN16Q9Y5I7 305 aa7.57□□□□□ -1.2
PCDH9-205ENST00000614931 B3GALT1Q9Y5Z6 326 aa7.57□□□□□ -1.2
PCDH9-205ENST00000614931 PTPRQQ9UMZ3 2332 aa7.57□□□□□ -1.2
PCDH9-205ENST00000614931 PCSK5Q92824 1860 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 MYOCOSA0A1B0GUC4 107 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 OR2W5A6NFC9 320 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 CCDC154A6NI56 674 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 EIF4E1BA6NMX2 242 aaKnown RBP7.56□□□□□ -1.2
PCDH9-205ENST00000614931 STMND1H3BQB6 276 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 FXYD1O00168 92 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 MRASO14807 208 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 CFLARO15519 480 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 JRKO75564 520 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 SCRG1O75711 98 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 KIAA0754O94854 1291 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 PRB1P04280 392 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 NTRK1P04629 796 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 PRPS1L1P21108 318 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 ALAS2P22557 587 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 CPN2P22792 545 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 PTPN6P29350 595 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 S100A3P33764 101 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 PTGER1P34995 402 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 RORAP35398 523 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 SOX18P35713 384 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 CPOXP36551 454 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 HPCAL1P37235 193 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 CDKN2CP42773 168 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 ALDH9A1P49189 494 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 KCNK10P57789 538 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 ID2Q02363 134 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 C19orf57Q0VDD7 668 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 SRSF6Q13247 344 aaKnown RBP7.56□□□□□ -1.2
PCDH9-205ENST00000614931 CYLC2Q14093 348 aaPredicted RBP7.56□□□□□ -1.2
PCDH9-205ENST00000614931 FAM214AQ32MH5 1076 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.56□□□□□ -1.2
PCDH9-205ENST00000614931 LACTB2Q53H82 288 aaPredicted RBP7.56□□□□□ -1.2
PCDH9-205ENST00000614931 CCDC121Q6ZUS5 278 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 ANKRD46Q86W74 232 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 MSRB3Q8IXL7 192 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 GLB1L3Q8NCI6 653 aaPredicted RBP7.56□□□□□ -1.2
PCDH9-205ENST00000614931 RP9Q8TA86 221 aaKnown RBP7.56□□□□□ -1.2
PCDH9-205ENST00000614931 DNAJB14Q8TBM8 379 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 NKD1Q969G9 470 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 EXOSC8Q96B26 276 aaKnown RBP7.56□□□□□ -1.2
PCDH9-205ENST00000614931 ANKRD9Q96BM1 317 aaPredicted RBP7.56□□□□□ -1.2
PCDH9-205ENST00000614931 PPCDCQ96CD2 204 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 CNRIP1Q96F85 164 aaPredicted RBP7.56□□□□□ -1.2
PCDH9-205ENST00000614931 PEX11GQ96HA9 241 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 ZBTB18Q99592 522 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 INPP5KQ9BT40 448 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 NDC1Q9BTX1 674 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 SLC25A23Q9BV35 468 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 DUSP26Q9BV47 211 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 NPLQ9BXD5 320 aaPredicted RBP7.56□□□□□ -1.2
PCDH9-205ENST00000614931 ASPSCR1Q9BZE9 553 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 SPRY4Q9C004 299 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 TRIM4Q9C037 500 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 AKIRIN1Q9H9L7 192 aaPredicted RBP7.56□□□□□ -1.2
PCDH9-205ENST00000614931 FBXO8Q9NRD0 319 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 LANCL2Q9NS86 450 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 TMEM45AQ9NWC5 275 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 SLAMF8Q9P0V8 285 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 PHF11Q9UIL8 331 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 SRPK3Q9UPE1 567 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 MAN2B2Q9Y2E5 1009 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 LAMA5O15230 3695 aa7.56□□□□□ -1.2
PCDH9-205ENST00000614931 A0A088AWK7 358 aa7.55□□□□□ -1.2
PCDH9-205ENST00000614931 TRBV5-3A0A0A0MS03 114 aa7.55□□□□□ -1.2
PCDH9-205ENST00000614931 A0A1W2PP18 115 aa7.55□□□□□ -1.2
PCDH9-205ENST00000614931 C1orf226A1L170 272 aa7.55□□□□□ -1.2
PCDH9-205ENST00000614931 BBIP1A8MTZ0 92 aa7.55□□□□□ -1.2
PCDH9-205ENST00000614931 H0YIG0 161 aa7.55□□□□□ -1.2
PCDH9-205ENST00000614931 AIM2O14862 343 aa7.55□□□□□ -1.2
PCDH9-205ENST00000614931 POLR1CO15160 346 aaPredicted RBP7.55□□□□□ -1.2
PCDH9-205ENST00000614931 FGF17O60258 216 aa7.55□□□□□ -1.2
PCDH9-205ENST00000614931 LDB3O75112 727 aa7.55□□□□□ -1.2
PCDH9-205ENST00000614931 UNC5CO95185 931 aa7.55□□□□□ -1.2
PCDH9-205ENST00000614931 C6orf47O95873 294 aa7.55□□□□□ -1.2
PCDH9-205ENST00000614931 PGRP06401 933 aa7.55□□□□□ -1.2
PCDH9-205ENST00000614931 C8orf89P0DMQ9 161 aa7.55□□□□□ -1.2
PCDH9-205ENST00000614931 ESRRAP11474 423 aaPredicted RBP7.55□□□□□ -1.2
PCDH9-205ENST00000614931 RNH1P13489 461 aaKnown RBP7.55□□□□□ -1.2
PCDH9-205ENST00000614931 DRD2P14416 443 aa7.55□□□□□ -1.2
PCDH9-205ENST00000614931 WT1P19544 449 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms