RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 SAMD12Q8N8I0 201 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 GLIS1Q8NBF1 620 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 NPLQ9BXD5 320 aaPredicted RBP16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 GSKIPQ9P0R6 139 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 RICTORQ6R327 1708 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 GALTP07902 379 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 H2AFB2P0C5Z0 115 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 OXTRP30559 389 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 GALNT1Q10472 559 aaPredicted RBP16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 ZNF792Q3KQV3 632 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 ARHGAP11AQ6P4F7 1023 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 ERN2Q76MJ5 926 aaKnown RBP16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 ZER1Q7Z7L7 766 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 TMEM125Q96AQ2 219 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 ZDHHC12Q96GR4 267 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 KCNA7Q96RP8 456 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 RGCCQ9H4X1 137 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 DIRAS1O95057 198 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 CFL1P23528 166 aaKnown RBP16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 AGTR1P30556 359 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 C3orf33Q6P1S2 294 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 ZNF584Q8IVC4 421 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 NEIL3Q8TAT5 605 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 HAVCR2Q8TDQ0 301 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 TMPRSS11EQ9UL52 423 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 MON2Q7Z3U7 1717 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 A8MV72 311 aaPredicted RBP16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 B8ZZF3 427 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 SCAMP1O15126 338 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 VILLO15195 856 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 TFPTP0C1Z6 253 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 TLE2Q04725 743 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 ELOCQ15369 112 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 KBTBD6Q86V97 674 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 CLDN19Q8N6F1 224 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 OR56A3Q8NH54 315 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 BRI3BPQ8WY22 251 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 GLYATL1Q969I3 302 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 NECAB3Q96P71 396 aaPredicted RBP16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 SETD1AO15047 1707 aaKnown RBP16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 A0A1B0GVT2 93 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 RAD51DO75771 328 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 RGS9O75916 674 aaPredicted RBP16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 CSF2P04141 144 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 RPS21P63220 83 aaKnown RBP16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 PMS2P3Q13401 168 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 MOGSQ13724 837 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 ITPKCQ96DU7 683 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 SCLYQ96I15 445 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 PFDN5Q99471 154 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 TSNAXQ99598 290 aaKnown RBP16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 COPZ2Q9P299 210 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 STUB1Q9UNE7 303 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 UBR1Q8IWV7 1749 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 C12orf71A8MTZ7 269 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 B4GALT2O60909 372 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 MAP2K4P45985 399 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 DUSP3P51452 185 aaPredicted RBP16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 SELENOVP59797 346 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 ITPRIPL2Q3MIP1 535 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 PRRT3Q5FWE3 981 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 BCAS3Q9H6U6 928 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 PADI2Q9Y2J8 665 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 CACNA1FO60840 1977 aa16.71■□□□□ 0.27
HMGXB3-206ENST00000613459 GSTM2P28161 218 aa16.71■□□□□ 0.26
HMGXB3-206ENST00000613459 CRISP1P54107 249 aa16.71■□□□□ 0.26
HMGXB3-206ENST00000613459 Q8N402 240 aa16.71■□□□□ 0.26
HMGXB3-206ENST00000613459 CNIH3Q8TBE1 160 aa16.71■□□□□ 0.26
HMGXB3-206ENST00000613459 KCNK6Q9Y257 313 aa16.71■□□□□ 0.26
HMGXB3-206ENST00000613459 CPED1A4D0V7 1026 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 TRIM64A6NGJ6 449 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 TTLL8A6PVC2 850 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 KDELR2P33947 212 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 UGT3A2Q3SY77 523 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 CASTOR1Q8WTX7 329 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 SCRN2Q96FV2 425 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 EEF1E1O43324 174 aaKnown RBP16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 HNRNPA1P09651 372 aaKnown RBP eCLIP16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 RPS15AP62244 130 aaKnown RBP16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 HSD11B2P80365 405 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 OR6N2Q8NGY6 317 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 HERC2P3Q9BVR0 1158 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 ERVK-18Q9QC07 812 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 SLC7A11Q9UPY5 501 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 H7C417 338 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 SYNGR4O95473 234 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 SNAP29O95721 258 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 GTF2F2P13984 249 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 FNTBP49356 437 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 TEAD2Q15562 447 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 ALG10BQ5I7T1 473 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 OR52E8Q6IFG1 317 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 OR8S1Q8NH09 359 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 SCGB1C1Q8TD33 95 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 KLHDC7BQ96G42 594 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 FOLH1BQ9HBA9 442 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 OR2B3O76000 313 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 FDXRP22570 491 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 ARL3P36405 182 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 PPP1R8Q12972 351 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms