RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 GPR149Q86SP6 731 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 SORCS1Q8WY21 1168 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 SGK3Q96BR1 496 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 FOXRED1Q96CU9 486 aaPredicted RBP8.44□□□□□ -1.06
TTC28-208ENST00000612946 SLC25A31Q9H0C2 315 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 LIPT1Q9Y234 373 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 DIP2BQ9P265 1576 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 PTPRZ1P23471 2315 aaPredicted RBP8.44□□□□□ -1.06
TTC28-208ENST00000612946 ZNF587BE7ETH6 402 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 OR12D2P58182 307 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 RAB40BQ12829 278 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 ESPL1Q14674 2120 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 TANGO2Q6ICL3 276 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 IQCHQ86VS3 1027 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 SPPL2BQ8TCT7 592 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 GPR151Q8TDV0 419 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 HAS1Q92839 578 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 CENPOQ9BU64 300 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 SLC28A3Q9HAS3 691 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 ANKRD63C9JTQ0 380 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 CAV3P56539 151 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 SNRPD2P62316 118 aaKnown RBP8.44□□□□□ -1.06
TTC28-208ENST00000612946 TMEM198Q66K66 360 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 BEND4Q6ZU67 534 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 ADAMTS14Q8WXS8 1223 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 NUMBLQ9Y6R0 609 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 A0A1W2PQ09 198 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 M0QZK8 103 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 E2F3O00716 465 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 GGCTO75223 188 aaKnown RBP8.44□□□□□ -1.06
TTC28-208ENST00000612946 CRHBPP24387 322 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 MPIP34949 423 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 ERVK-21P61565 698 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 TOR1AIP1Q5JTV8 583 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 KANSL1Q7Z3B3 1105 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 ST8SIA4Q92187 359 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 SCML1Q9UN30 329 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.44□□□□□ -1.06
TTC28-208ENST00000612946 RNF225M0QZC1 329 aaPredicted RBP8.44□□□□□ -1.06
TTC28-208ENST00000612946 POU2F1P14859 743 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 CTNNB1P35222 781 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 CNTN2Q02246 1040 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 NRG1Q02297 640 aaPredicted RBP8.44□□□□□ -1.06
TTC28-208ENST00000612946 UPP1Q16831 310 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 C22orf42Q6IC83 251 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 NPAS3Q8IXF0 933 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 KCT2Q8NC54 265 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 DNAAF1Q8NEP3 725 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 KREMEN1Q96MU8 473 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 AIG1Q9NVV5 245 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 ATRXP46100 2492 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 PXDNQ92626 1479 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 A0A1B0GVG6 124 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 TCRBV7S2A1N4TA0A589 114 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 MAGEB4O15481 346 aaPredicted RBP8.44□□□□□ -1.06
TTC28-208ENST00000612946 IRF1P10914 325 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 SPP2Q13103 211 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 RCAN2Q14206 197 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 OR10K2Q6IF99 312 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 KCTD18Q6PI47 426 aaPredicted RBP8.44□□□□□ -1.06
TTC28-208ENST00000612946 ANKRD46Q86W74 232 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 JAGN1Q8N5M9 183 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 AGBL3Q8NEM8 1001 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 SYT3Q9BQG1 590 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 OR51V1Q9H2C8 321 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 CHRNA9Q9UGM1 479 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 TTLL8A6PVC2 850 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 EPHX2P34913 555 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 FRG2Q64ET8 278 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 RHOUQ7L0Q8 258 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 KLHDC8BQ8IXV7 354 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 FRG2BQ96QU4 278 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 EVA1BQ9NVM1 165 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 EVLQ9UI08 416 aaPredicted RBP8.44□□□□□ -1.06
TTC28-208ENST00000612946 MFSD11O43934 449 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 TMEM63AO94886 807 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 IL1R1P14778 569 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 NFYBP25208 207 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 ASPAP45381 313 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 ACBD7Q8N6N7 88 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 EDEM1Q92611 657 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 LRFN5Q96NI6 719 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 FCRL5Q96RD9 977 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 CNTNAP3Q9BZ76 1288 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 RANGRFQ9HD47 186 aaPredicted RBP8.44□□□□□ -1.06
TTC28-208ENST00000612946 DTLQ9NZJ0 730 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 ZNF878C9JN71 531 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 NPIPA7E9PJI5 369 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 FABP1P07148 127 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 NPIPA8P0DM63 369 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 ELK1P19419 428 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 UQCRC2P22695 453 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 LTKP29376 864 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 DUSP7Q16829 419 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 RNASE10Q5GAN6 216 aaKnown RBP8.44□□□□□ -1.06
TTC28-208ENST00000612946 SOHLH1Q5JUK2 328 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 LARP4Q71RC2 724 aaKnown RBP eCLIP8.44□□□□□ -1.06
TTC28-208ENST00000612946 COX18Q8N8Q8 333 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 TMEM41AQ96HV5 264 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 TXNL4BQ9NX01 149 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms