RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 MCATQ8IVS2 390 aaKnown RBP8.43□□□□□ -1.06
CCDC47-207ENST00000612558 ZZZ3Q8IYH5 903 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 LILRA2Q8N149 483 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 DNAJC22Q8N4W6 341 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 TMEM102Q8N9M5 508 aaPredicted RBP8.43□□□□□ -1.06
CCDC47-207ENST00000612558 PAPD5Q8NDF8 572 aaKnown RBP8.43□□□□□ -1.06
CCDC47-207ENST00000612558 ZCCHC10Q8TBK6 192 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 LRTOMTQ8WZ04 291 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 NCSTNQ92542 709 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 UCN3Q969E3 161 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 FAM162AQ96A26 154 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 PPWD1Q96BP3 646 aaKnown RBP8.43□□□□□ -1.06
CCDC47-207ENST00000612558 AHCYL2Q96HN2 611 aaKnown RBP8.43□□□□□ -1.06
CCDC47-207ENST00000612558 CD180Q99467 661 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 MAP3K3Q99759 626 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 MAPKAP1Q9BPZ7 522 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 UGT2B28Q9BY64 529 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 TRIM4Q9C037 500 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 KLHL4Q9C0H6 718 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 CHRNA10Q9GZZ6 450 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 FAM60AQ9NP50 221 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 SLAMF7Q9NQ25 335 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 DNAAF2Q9NVR5 837 aaKnown RBP8.43□□□□□ -1.06
CCDC47-207ENST00000612558 MS4A12Q9NXJ0 267 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 NLGN3Q9NZ94 848 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 C5AR2Q9P296 337 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 PHF11Q9UIL8 331 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 PSME2Q9UL46 239 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 C15orf41Q9Y2V0 281 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 SLC22A7Q9Y694 548 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 TNRC6BQ9UPQ9 1833 aaKnown RBP8.43□□□□□ -1.06
CCDC47-207ENST00000612558 BDP1A6H8Y1 2624 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 PCDH15Q96QU1 1955 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 ASXL3Q9C0F0 2248 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 USP34Q70CQ2 3546 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 A0A1B0GTQ1 180 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 TLCD2A6NGC4 264 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 GLOD5A6NK44 160 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 NR2F6P10588 404 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 FCGR1AP12314 374 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 HOXB6P17509 224 aaKnown RBP8.42□□□□□ -1.06
CCDC47-207ENST00000612558 EPHA8P29322 1005 aaPredicted RBP8.42□□□□□ -1.06
CCDC47-207ENST00000612558 NTSP30990 170 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 TLX1P31314 330 aaPredicted RBP8.42□□□□□ -1.06
CCDC47-207ENST00000612558 HOXD12P35452 270 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 SOAT1P35610 550 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 BUD31P41223 144 aaPredicted RBP8.42□□□□□ -1.06
CCDC47-207ENST00000612558 CRATP43155 626 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 MVDP53602 400 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 GPLD1P80108 840 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 FADDQ13158 208 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 RUNX2Q13950 521 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 VEZF1Q14119 521 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 NR1D2Q14995 579 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 ADRM1Q16186 407 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 FAM98BQ52LJ0 330 aaKnown RBP8.42□□□□□ -1.06
CCDC47-207ENST00000612558 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.42□□□□□ -1.06
CCDC47-207ENST00000612558 WLSQ5T9L3 541 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 OGFRL1Q5TC84 451 aaPredicted RBP8.42□□□□□ -1.06
CCDC47-207ENST00000612558 LPCAT4Q643R3 524 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 C18orf63Q68DL7 685 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 FAM180BQ6P0A1 224 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 ANGPTL8Q6UXH0 198 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 FAM92BQ6ZTR7 304 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 ERMP1Q7Z2K6 904 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 DGLUCYQ7Z3D6 616 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 RABEPKQ7Z6M1 372 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 PTOV1Q86YD1 416 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 SLC35F3Q8IY50 421 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 CARFQ8N187 725 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 CLEC4FQ8N1N0 589 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 CATSPER1Q8NEC5 780 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 ADCY4Q8NFM4 1077 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 OR52N2Q8NGI0 321 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 ZFP28Q8NHY6 868 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 PSMA8Q8TAA3 256 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 CEP76Q8TAP6 659 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 PNPT1Q8TCS8 783 aaKnown RBP8.42□□□□□ -1.06
CCDC47-207ENST00000612558 NETO1Q8TDF5 533 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 DNAJC9Q8WXX5 260 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 NCLNQ969V3 563 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 AMDHD1Q96NU7 426 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 TGM7Q96PF1 710 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 BBS4Q96RK4 519 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 DUSP23Q9BVJ7 150 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 CHST8Q9H2A9 424 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 CXorf36Q9H7Y0 433 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 LYRM4Q9HD34 91 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 GIMAP4Q9NUV9 329 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 DCAF13Q9NV06 445 aaKnown RBP8.42□□□□□ -1.06
CCDC47-207ENST00000612558 OLAHQ9NV23 265 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 GPATCH2Q9NW75 528 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 ZSCAN32Q9NX65 697 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 KCMF1Q9P0J7 381 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 CES1P1Q9UKY3 287 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 SNX8Q9Y5X2 465 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 SPTBP11277 2137 aa8.42□□□□□ -1.06
CCDC47-207ENST00000612558 IGHV1OR21-1A0A087WYE8 117 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 RNF103-CHMP3A0A140T963 221 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 WASHC1A8K0Z3 465 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms