RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 FOLH1Q04609 750 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 CSTF3Q12996 717 aaKnown RBP11.5□□□□□ -0.57
CBWD3-208ENST00000612050 GFRALQ6UXV0 394 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 SLC29A4Q7RTT9 530 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 ST13P4Q8IZP2 240 aaPredicted RBP11.5□□□□□ -0.57
CBWD3-208ENST00000612050 CYP4Z2PQ8N1L4 340 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 RNF175Q8N4F7 328 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 CDYL2Q8N8U2 506 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 GBP7Q8N8V2 638 aaPredicted RBP11.5□□□□□ -0.57
CBWD3-208ENST00000612050 APCDD1LQ8NCL9 501 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 TMEM52Q8NDY8 209 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 OR8K3Q8NH51 312 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 SSC4DQ8WTU2 575 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 L3HYPDHQ96EM0 354 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 TMEM237Q96Q45 408 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 SORBS1Q9BX66 1292 aaKnown RBP11.5□□□□□ -0.57
CBWD3-208ENST00000612050 TIMMDC1Q9NPL8 285 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 HPF1Q9NWY4 346 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 VPS29Q9UBQ0 182 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 SEC14L3Q9UDX4 400 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 PPIEQ9UNP9 301 aaKnown RBP11.5□□□□□ -0.57
CBWD3-208ENST00000612050 SLC5A6Q9Y289 635 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 BSNQ9UPA5 3926 aa11.49□□□□□ -0.57
CBWD3-208ENST00000612050 A0A1B0GUH1 482 aa11.49□□□□□ -0.57
CBWD3-208ENST00000612050 ESRRBO95718 433 aa11.49□□□□□ -0.57
CBWD3-208ENST00000612050 GPR75O95800 540 aa11.49□□□□□ -0.57
CBWD3-208ENST00000612050 PDYNP01213 254 aa11.49□□□□□ -0.57
CBWD3-208ENST00000612050 SHBGP04278 402 aa11.49□□□□□ -0.57
CBWD3-208ENST00000612050 KLK1P06870 262 aa11.49□□□□□ -0.57
CBWD3-208ENST00000612050 KRT4P19013 534 aa11.49□□□□□ -0.57
CBWD3-208ENST00000612050 TSPAN8P19075 237 aa11.49□□□□□ -0.57
CBWD3-208ENST00000612050 TRHRP34981 398 aaPredicted RBP11.49□□□□□ -0.57
CBWD3-208ENST00000612050 CRHR1P34998 444 aa11.49□□□□□ -0.57
CBWD3-208ENST00000612050 BSGP35613 385 aa11.49□□□□□ -0.57
CBWD3-208ENST00000612050 IMPG1Q17R60 797 aa11.49□□□□□ -0.57
CBWD3-208ENST00000612050 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.49□□□□□ -0.57
CBWD3-208ENST00000612050 SPINK14Q6IE38 97 aa11.49□□□□□ -0.57
CBWD3-208ENST00000612050 LETMD1Q6P1Q0 360 aa11.49□□□□□ -0.57
CBWD3-208ENST00000612050 OPN5Q6U736 354 aa11.49□□□□□ -0.57
CBWD3-208ENST00000612050 ZYG11AQ6WRX3 759 aa11.49□□□□□ -0.57
CBWD3-208ENST00000612050 GALNTL5Q7Z4T8 443 aa11.49□□□□□ -0.57
CBWD3-208ENST00000612050 POGLUT1Q8NBL1 392 aa11.49□□□□□ -0.57
CBWD3-208ENST00000612050 MDS2Q8NDY4 140 aa11.49□□□□□ -0.57
CBWD3-208ENST00000612050 OR4K14Q8NGD5 310 aa11.49□□□□□ -0.57
CBWD3-208ENST00000612050 SLC22A8Q8TCC7 542 aa11.49□□□□□ -0.57
CBWD3-208ENST00000612050 SLC2A12Q8TD20 617 aa11.49□□□□□ -0.57
CBWD3-208ENST00000612050 EPS8L3Q8TE67 593 aaKnown RBP11.49□□□□□ -0.57
CBWD3-208ENST00000612050 RIT1Q92963 219 aa11.49□□□□□ -0.57
CBWD3-208ENST00000612050 SIGLEC12Q96PQ1 595 aa11.49□□□□□ -0.57
CBWD3-208ENST00000612050 BARD1Q99728 777 aaKnown RBP11.49□□□□□ -0.57
CBWD3-208ENST00000612050 ROPN1BQ9BZX4 212 aaPredicted RBP11.49□□□□□ -0.57
CBWD3-208ENST00000612050 EPB41L4BQ9H329 900 aa11.49□□□□□ -0.57
CBWD3-208ENST00000612050 ANKZF1Q9H8Y5 726 aa11.49□□□□□ -0.57
CBWD3-208ENST00000612050 ROPN1Q9HAT0 212 aaPredicted RBP11.49□□□□□ -0.57
CBWD3-208ENST00000612050 NTNG1Q9Y2I2 539 aa11.49□□□□□ -0.57
CBWD3-208ENST00000612050 BOLA1Q9Y3E2 137 aa11.49□□□□□ -0.57
CBWD3-208ENST00000612050 ATG4BQ9Y4P1 393 aa11.49□□□□□ -0.57
CBWD3-208ENST00000612050 A0A1W2PPM1 405 aa11.48□□□□□ -0.57
CBWD3-208ENST00000612050 C1orf226A1L170 272 aa11.48□□□□□ -0.57
CBWD3-208ENST00000612050 ESPNB1AK53 854 aa11.48□□□□□ -0.57
CBWD3-208ENST00000612050 FGF17O60258 216 aa11.48□□□□□ -0.57
CBWD3-208ENST00000612050 EEDO75530 441 aaKnown RBP11.48□□□□□ -0.57
CBWD3-208ENST00000612050 CHEK2O96017 543 aa11.48□□□□□ -0.57
CBWD3-208ENST00000612050 CPA3P15088 417 aa11.48□□□□□ -0.57
CBWD3-208ENST00000612050 GPR143P51810 404 aa11.48□□□□□ -0.57
CBWD3-208ENST00000612050 HNRNPH2P55795 449 aaKnown RBP11.48□□□□□ -0.57
CBWD3-208ENST00000612050 VSNL1P62760 191 aa11.48□□□□□ -0.57
CBWD3-208ENST00000612050 ID2Q02363 134 aa11.48□□□□□ -0.57
CBWD3-208ENST00000612050 ACSM2AQ08AH3 577 aa11.48□□□□□ -0.57
CBWD3-208ENST00000612050 TBL3Q12788 808 aaKnown RBP11.48□□□□□ -0.57
CBWD3-208ENST00000612050 UNC50Q53HI1 259 aa11.48□□□□□ -0.57
CBWD3-208ENST00000612050 KRTCAP3Q53RY4 240 aa11.48□□□□□ -0.57
CBWD3-208ENST00000612050 SPIN4Q56A73 249 aa11.48□□□□□ -0.57
CBWD3-208ENST00000612050 HLA-DQA1Q5Y7H0 255 aa11.48□□□□□ -0.57
CBWD3-208ENST00000612050 ACSM2BQ68CK6 577 aa11.48□□□□□ -0.57
CBWD3-208ENST00000612050 C18orf63Q68DL7 685 aa11.48□□□□□ -0.57
CBWD3-208ENST00000612050 WDR93Q6P2C0 686 aa11.48□□□□□ -0.57
CBWD3-208ENST00000612050 RNF111Q6ZNA4 994 aa11.48□□□□□ -0.57
CBWD3-208ENST00000612050 OR4N5Q8IXE1 308 aa11.48□□□□□ -0.57
CBWD3-208ENST00000612050 METTL4Q8N3J2 472 aa11.48□□□□□ -0.57
CBWD3-208ENST00000612050 SCMH1Q96GD3 660 aa11.48□□□□□ -0.57
CBWD3-208ENST00000612050 MAGED4Q96JG8 741 aa11.48□□□□□ -0.57
CBWD3-208ENST00000612050 SMC6Q96SB8 1091 aa11.48□□□□□ -0.57
CBWD3-208ENST00000612050 SLX1AQ9BQ83 275 aa11.48□□□□□ -0.57
CBWD3-208ENST00000612050 CNPPD1Q9BV87 410 aa11.48□□□□□ -0.57
CBWD3-208ENST00000612050 MRPL1Q9BYD6 325 aaKnown RBP11.48□□□□□ -0.57
CBWD3-208ENST00000612050 MID1IP1Q9NPA3 183 aa11.48□□□□□ -0.57
CBWD3-208ENST00000612050 GIMAP4Q9NUV9 329 aa11.48□□□□□ -0.57
CBWD3-208ENST00000612050 MYOTQ9UBF9 498 aa11.48□□□□□ -0.57
CBWD3-208ENST00000612050 SUCOQ9UBS9 1254 aaKnown RBP11.48□□□□□ -0.57
CBWD3-208ENST00000612050 ASB4Q9Y574 426 aa11.48□□□□□ -0.57
CBWD3-208ENST00000612050 HELZ2Q9BYK8 2649 aaKnown RBP11.48□□□□□ -0.57
CBWD3-208ENST00000612050 SHANK1Q9Y566 2161 aa11.48□□□□□ -0.57
CBWD3-208ENST00000612050 ESPL1Q14674 2120 aa11.47□□□□□ -0.57
CBWD3-208ENST00000612050 MYOCOSA0A1B0GUC4 107 aa11.47□□□□□ -0.57
CBWD3-208ENST00000612050 GNG14A0A1W2PPG7 69 aa11.47□□□□□ -0.57
CBWD3-208ENST00000612050 OR6C76A6NM76 312 aa11.47□□□□□ -0.57
CBWD3-208ENST00000612050 CAPN14A8MX76 684 aa11.47□□□□□ -0.57
CBWD3-208ENST00000612050 ACOT7O00154 380 aa11.47□□□□□ -0.57
CBWD3-208ENST00000612050 MANBAO00462 879 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms