RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 GMPR2Q9P2T1 348 aaKnown RBP6.94□□□□□ -1.3
CSDE1-218ENST00000610726 RPL36Q9Y3U8 105 aaKnown RBP6.94□□□□□ -1.3
CSDE1-218ENST00000610726 ZNF99A8MXY4 864 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-218ENST00000610726 SLC30A4O14863 429 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 PGRMC2O15173 223 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 GIMD1P0DJR0 217 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 F3P13726 295 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 CD36P16671 472 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 GM2AP17900 193 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 ELK4P28324 431 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 ACSL1P33121 698 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 BNC1Q01954 994 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 ROR2Q01974 943 aaKnown RBP6.94□□□□□ -1.3
CSDE1-218ENST00000610726 NFATC4Q14934 902 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 KIAA1614Q5VZ46 1190 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 MZT2AQ6P582 158 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 UTS2BQ765I0 119 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 ACOT4Q8N9L9 421 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 FGF14Q92915 247 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 ECHDC3Q96DC8 303 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 SLC6A16Q9GZN6 736 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 ACTL8Q9H568 366 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 PELI2Q9HAT8 420 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 BRF2Q9HAW0 419 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 KLRF1Q9NZS2 232 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 CPNE7Q9UBL6 633 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 SUSD2Q9UGT4 822 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 MED31Q9Y3C7 131 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 SPIN1Q9Y657 262 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-218ENST00000610726 DNMT3AQ9Y6K1 912 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-218ENST00000610726 ASXL3Q9C0F0 2248 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 AHCTF1Q8WYP5 2266 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 C17orf113A0A1B0GUU1 675 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 DAPL1A0PJW8 107 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 BLOC1S5-TXNDC5H3BN57 136 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 SOCS2O14508 198 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 GPR37L1O60883 481 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 HMGN1P05114 100 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 AZGP1P25311 298 aaKnown RBP6.93□□□□□ -1.3
CSDE1-218ENST00000610726 CD38P28907 300 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 CSNK1EP49674 416 aaKnown RBP6.93□□□□□ -1.3
CSDE1-218ENST00000610726 ATP12AP54707 1039 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 MLLT10P55197 1068 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 ACVR1Q04771 509 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 TDGQ13569 410 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 ARHGAP19Q14CB8 494 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 RGNQ15493 299 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 TIGD6Q17RP2 521 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 RGS21Q2M5E4 152 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 CRTC2Q53ET0 693 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-218ENST00000610726 PYDC2Q56P42 97 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 ZNF765Q7L2R6 523 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 OR52N2Q8NGI0 321 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 OR2T11Q8NH01 316 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 GORASP1Q9BQQ3 440 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 SPRTNQ9H040 489 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-218ENST00000610726 KAT8Q9H7Z6 458 aaKnown RBP6.93□□□□□ -1.3
CSDE1-218ENST00000610726 PLGRKTQ9HBL7 147 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 ZC4H2Q9NQZ6 224 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 MBNL1Q9NR56 388 aaKnown RBP6.93□□□□□ -1.3
CSDE1-218ENST00000610726 OR6C2Q9NZP2 312 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 TMEM181Q9P2C4 612 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 PLEKHM1Q9Y4G2 1056 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 A0A0A6YYC8 382 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-218ENST00000610726 SOBPA7XYQ1 873 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 H0Y8X5 98 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 I3L1I5 382 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-218ENST00000610726 FBP2O00757 339 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 AHCYL1O43865 530 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 SNX4O95219 450 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 APOL3O95236 402 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 ZNF888P0CJ79 500 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-218ENST00000610726 CD6P30203 668 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 BMP8BP34820 402 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 MAGEA12P43365 314 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 TNFRSF4P43489 277 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 CDKL1Q00532 357 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 PIGFQ07326 219 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 MYBPC3Q14896 1274 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 RPE65Q16518 533 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 EXOC3L2Q2M3D2 409 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 HENMT1Q5T8I9 393 aaKnown RBP6.93□□□□□ -1.3
CSDE1-218ENST00000610726 CES4AQ5XG92 561 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 BMP8AQ7Z5Y6 402 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 OR51A7Q8NH64 312 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 CNIH3Q8TBE1 160 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 MR1Q95460 341 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 CD180Q99467 661 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 TIMM29Q9BSF4 260 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 P2RY12Q9H244 342 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 LIN28AQ9H9Z2 209 aaKnown RBP6.93□□□□□ -1.3
CSDE1-218ENST00000610726 NLGN3Q9NZ94 848 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 ARFGEF1Q9Y6D6 1849 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 TPRP12270 2363 aaKnown RBP6.93□□□□□ -1.3
CSDE1-218ENST00000610726 SLC9B1P1A6NJY1 282 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 CHST10O43529 356 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 RDH16O75452 317 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 APBB3O95704 486 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 HEXBP07686 556 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 ZNF24P17028 368 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms