RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 ETHE1O95571 254 aa10.78□□□□□ -0.68
PDLIM1P1-201ENST00000604187 IL18BPO95998 194 aa10.78□□□□□ -0.68
PDLIM1P1-201ENST00000604187 FPR1P21462 350 aa10.78□□□□□ -0.68
PDLIM1P1-201ENST00000604187 ZNF10P21506 573 aaPredicted RBP10.78□□□□□ -0.68
PDLIM1P1-201ENST00000604187 CERS1P27544 350 aa10.78□□□□□ -0.68
PDLIM1P1-201ENST00000604187 CDKN2DP55273 166 aa10.78□□□□□ -0.68
PDLIM1P1-201ENST00000604187 LIM2P55344 173 aa10.78□□□□□ -0.68
PDLIM1P1-201ENST00000604187 CDK16Q00536 496 aa10.78□□□□□ -0.68
PDLIM1P1-201ENST00000604187 ID2Q02363 134 aa10.78□□□□□ -0.68
PDLIM1P1-201ENST00000604187 KRTAP1-1Q07627 177 aa10.78□□□□□ -0.68
PDLIM1P1-201ENST00000604187 TBL3Q12788 808 aaKnown RBP10.78□□□□□ -0.68
PDLIM1P1-201ENST00000604187 FOXF2Q12947 444 aa10.78□□□□□ -0.68
PDLIM1P1-201ENST00000604187 ACKR1Q16570 336 aa10.78□□□□□ -0.68
PDLIM1P1-201ENST00000604187 DCST1Q5T197 706 aa10.78□□□□□ -0.68
PDLIM1P1-201ENST00000604187 LYPD8Q6UX82 237 aa10.78□□□□□ -0.68
PDLIM1P1-201ENST00000604187 C4orf22Q6V702 233 aa10.78□□□□□ -0.68
PDLIM1P1-201ENST00000604187 THOC6Q86W42 341 aaKnown RBP10.78□□□□□ -0.68
PDLIM1P1-201ENST00000604187 C9orf40Q8IXQ3 194 aa10.78□□□□□ -0.68
PDLIM1P1-201ENST00000604187 PPP1R14CQ8TAE6 165 aa10.78□□□□□ -0.68
PDLIM1P1-201ENST00000604187 GABPB2Q8TAK5 448 aaPredicted RBP10.78□□□□□ -0.68
PDLIM1P1-201ENST00000604187 MS4A6EQ96DS6 147 aa10.78□□□□□ -0.68
PDLIM1P1-201ENST00000604187 ZNF597Q96LX8 424 aa10.78□□□□□ -0.68
PDLIM1P1-201ENST00000604187 QRFPRQ96P65 431 aa10.78□□□□□ -0.68
PDLIM1P1-201ENST00000604187 CNIH4Q9P003 139 aa10.78□□□□□ -0.68
PDLIM1P1-201ENST00000604187 FBXO5Q9UKT4 447 aa10.78□□□□□ -0.68
PDLIM1P1-201ENST00000604187 SLC6A5Q9Y345 797 aa10.78□□□□□ -0.68
PDLIM1P1-201ENST00000604187 MAD1L1Q9Y6D9 718 aa10.78□□□□□ -0.68
PDLIM1P1-201ENST00000604187 CHCHD2Q9Y6H1 151 aaPredicted RBP10.78□□□□□ -0.68
PDLIM1P1-201ENST00000604187 LRIT2A6NDA9 550 aa10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 DEFB108AA8MXU0 73 aa10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 SIAH2O43255 324 aa10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 LDB3O75112 727 aa10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 CPOXP36551 454 aa10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 MSH2P43246 934 aa10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 PTH2RP49190 550 aa10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 DMTNQ08495 405 aa10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 RCN2Q14257 317 aa10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 EFTUD2Q15029 972 aaKnown RBP eCLIP10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 ARMC3Q5W041 872 aa10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 VASNQ6EMK4 673 aa10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 RAD9BQ6WBX8 426 aa10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 SYDE1Q6ZW31 735 aaPredicted RBP10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 KIAA1328Q86T90 577 aa10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 LMNTD2Q8IXW0 634 aa10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 GPATCH11Q8N954 259 aa10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 NUBPLQ8TB37 319 aa10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 ZNF721Q8TF20 911 aa10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 TMEM158Q8WZ71 300 aa10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 PIK3IP1Q96FE7 263 aa10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 GAL3ST4Q96RP7 486 aa10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 SECISBP2Q96T21 854 aaKnown RBP10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 SFXN3Q9BWM7 321 aa10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 UGT2B28Q9BY64 529 aa10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 TRIM54Q9BYV2 358 aa10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 GSX2Q9BZM3 304 aa10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 COPS7BQ9H9Q2 264 aaPredicted RBP10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 TAS2R13Q9NYV9 303 aa10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 NDRG3Q9UGV2 375 aa10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 CNOT11Q9UKZ1 510 aaKnown RBP10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 DAPP1Q9UN19 280 aa10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 KCNE2Q9Y6J6 123 aa10.77□□□□□ -0.69
PDLIM1P1-201ENST00000604187 ARID1AO14497 2285 aa10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 CTIFO43310 598 aaKnown RBP10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 TRIM3O75382 744 aaPredicted RBP10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 ACSL3O95573 720 aa10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 C1QAP02745 245 aa10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 HPNP05981 417 aa10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 FBXO45P0C2W1 286 aa10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 COX7A2P14406 83 aa10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 CDK9P50750 372 aaKnown RBP10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 MTTPP55157 894 aa10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 SARNPP82979 210 aaKnown RBP10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 SERTAD2Q14140 314 aa10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 RCAN2Q14206 197 aa10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 SLBPQ14493 270 aaKnown RBP eCLIP10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 HSP90AA5PQ58FG0 334 aa10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 RBM20Q5T481 1227 aaKnown RBP10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 ANKRD22Q5VYY1 191 aa10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 TRIM40Q6P9F5 258 aa10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 C20orf204Q6ZNR8 217 aa10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 CAND1Q86VP6 1230 aaKnown RBP10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 OR2L5Q8NG80 312 aa10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 CALML6Q8TD86 181 aa10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 NTNG2Q96CW9 530 aa10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 WDYHV1Q96HA8 205 aa10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 SENP5Q96HI0 755 aaPredicted RBP10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 SERINC2Q96SA4 455 aa10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 PIGQQ9BRB3 760 aa10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 FAM167BQ9BTA0 163 aa10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 REXO4Q9GZR2 422 aaKnown RBP10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 CALHM2Q9HA72 323 aa10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 KLHL28Q9NXS3 571 aa10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 SLC22A14Q9Y267 594 aa10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 CAPN6Q9Y6Q1 641 aa10.76□□□□□ -0.69
PDLIM1P1-201ENST00000604187 MAGEB16A2A368 324 aa10.75□□□□□ -0.69
PDLIM1P1-201ENST00000604187 SDR42E2A6NKP2 422 aa10.75□□□□□ -0.69
PDLIM1P1-201ENST00000604187 HRKO00198 91 aa10.75□□□□□ -0.69
PDLIM1P1-201ENST00000604187 IFNA2P01563 188 aa10.75□□□□□ -0.69
PDLIM1P1-201ENST00000604187 IGKV3-11P04433 115 aa10.75□□□□□ -0.69
PDLIM1P1-201ENST00000604187 ENO2P09104 434 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms