RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 BCKDKO14874 412 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 SUPT3HO75486 399 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 ATP6AP2O75787 350 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 FAM155BO75949 473 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 CELA3AP09093 270 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 SLC35E2BP0CK96 405 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 COX7A2P14406 83 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 MSX1P28360 303 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 STT3AP46977 705 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 GPX6P59796 221 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 FOXO1Q12778 655 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 ASPHQ12797 758 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 DLG1Q12959 904 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 SLAMF1Q13291 335 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 SLC10A1Q14973 349 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 MPEG1Q2M385 716 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 PIGGQ5H8A4 983 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 DEPDC1Q5TB30 811 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 GRTP1Q5TC63 336 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 KHDRBS2Q5VWX1 349 aaKnown RBP12.16□□□□□ -0.46
RPS28-204ENST00000602140 OR4C11Q6IEV9 310 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 CMC1Q7Z7K0 106 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 ISCA2Q86U28 154 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 DMRTC2Q8IXT2 367 aaPredicted RBP12.16□□□□□ -0.46
RPS28-204ENST00000602140 RNF175Q8N4F7 328 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 PPM1NQ8N819 430 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 PPWD1Q96BP3 646 aaKnown RBP12.16□□□□□ -0.46
RPS28-204ENST00000602140 CMTM7Q96FZ5 175 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 SENP5Q96HI0 755 aaPredicted RBP12.16□□□□□ -0.46
RPS28-204ENST00000602140 DGAT2Q96PD7 388 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 TTYH2Q9BSA4 534 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 LDAHQ9H6V9 325 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 SEMA4BQ9NPR2 832 aaPredicted RBP12.16□□□□□ -0.46
RPS28-204ENST00000602140 OPTCQ9UBM4 332 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 ACAD8Q9UKU7 415 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 ATG4BQ9Y4P1 393 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 ZNF407Q9C0G0 2248 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 HRKO00198 91 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 AQP7O14520 342 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 RAD51CO43502 376 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 DYRK3O43781 588 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 SUSD5O60279 629 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 KERAO60938 352 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 IGKV3-11P04433 115 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 HOXD4P09016 255 aaPredicted RBP12.15□□□□□ -0.46
RPS28-204ENST00000602140 GSTA2P09210 222 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 GLI4P10075 376 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 SERPINB1P30740 379 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 PIGAP37287 484 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 MAN2A2P49641 1150 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 RAP1GDS1P52306 607 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 IGLV3-21P80748 117 aaPredicted RBP12.15□□□□□ -0.46
RPS28-204ENST00000602140 FOLH1Q04609 750 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 DDX39BQ13838 428 aaKnown RBP12.15□□□□□ -0.46
RPS28-204ENST00000602140 SLMAPQ14BN4 828 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 HYAL4Q2M3T9 481 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 ZNF791Q3KP31 576 aaPredicted RBP12.15□□□□□ -0.46
RPS28-204ENST00000602140 KBTBD12Q3ZCT8 623 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 RTL6Q6ICC9 239 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 B3GNT6Q6ZMB0 384 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 SPNS3Q6ZMD2 512 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 DGAT2L6Q6ZPD8 337 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 MAATS1Q7Z4T9 603 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 TBC1D1Q86TI0 1168 aaPredicted RBP12.15□□□□□ -0.46
RPS28-204ENST00000602140 C9orf40Q8IXQ3 194 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 C7orf57Q8NEG2 295 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 NUBPLQ8TB37 319 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 SLC22A8Q8TCC7 542 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 DOK4Q8TEW6 326 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 RGMAQ96B86 450 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 RBM18Q96H35 190 aaKnown RBP12.15□□□□□ -0.46
RPS28-204ENST00000602140 ATOH8Q96SQ7 321 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 ZNF559Q9BR84 538 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 RPF2Q9H7B2 306 aaKnown RBP12.15□□□□□ -0.46
RPS28-204ENST00000602140 NMRAL1Q9HBL8 299 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 MS4A12Q9NXJ0 267 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 GRHL1Q9NZI5 618 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 FAM215AQ9Y5M1 114 aa12.15□□□□□ -0.46
RPS28-204ENST00000602140 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.15□□□□□ -0.46
RPS28-204ENST00000602140 HCFC1P51610 2035 aa12.15□□□□□ -0.47
RPS28-204ENST00000602140 PRKRAO75569 313 aaKnown RBP12.14□□□□□ -0.47
RPS28-204ENST00000602140 LTA4HP09960 611 aaKnown RBP12.14□□□□□ -0.47
RPS28-204ENST00000602140 EPB42P16452 691 aa12.14□□□□□ -0.47
RPS28-204ENST00000602140 CRABP2P29373 138 aa12.14□□□□□ -0.47
RPS28-204ENST00000602140 ZFP36L2P47974 494 aaKnown RBP12.14□□□□□ -0.47
RPS28-204ENST00000602140 PLTPP55058 493 aa12.14□□□□□ -0.47
RPS28-204ENST00000602140 HNRNPH2P55795 449 aaKnown RBP12.14□□□□□ -0.47
RPS28-204ENST00000602140 PLIN5Q00G26 463 aa12.14□□□□□ -0.47
RPS28-204ENST00000602140 PCDH1Q08174 1060 aa12.14□□□□□ -0.47
RPS28-204ENST00000602140 WLSQ5T9L3 541 aa12.14□□□□□ -0.47
RPS28-204ENST00000602140 SLC22A10Q63ZE4 541 aa12.14□□□□□ -0.47
RPS28-204ENST00000602140 C18orf63Q68DL7 685 aa12.14□□□□□ -0.47
RPS28-204ENST00000602140 GRHL2Q6ISB3 625 aa12.14□□□□□ -0.47
RPS28-204ENST00000602140 ADGRD1Q6QNK2 874 aa12.14□□□□□ -0.47
RPS28-204ENST00000602140 GPR180Q86V85 440 aa12.14□□□□□ -0.47
RPS28-204ENST00000602140 CCDC25Q86WR0 208 aa12.14□□□□□ -0.47
RPS28-204ENST00000602140 MYLK4Q86YV6 388 aaPredicted RBP12.14□□□□□ -0.47
RPS28-204ENST00000602140 TEX9Q8N6V9 391 aa12.14□□□□□ -0.47
RPS28-204ENST00000602140 SPATA4Q8NEY3 305 aa12.14□□□□□ -0.47
RPS28-204ENST00000602140 HUS1BQ8NHY5 278 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms