RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 MYOCOSA0A1B0GUC4 107 aa12.26□□□□□ -0.45
H3F3B-213ENST00000593254 H0YIV9 168 aa12.26□□□□□ -0.45
H3F3B-213ENST00000593254 SAP18O00422 153 aaKnown RBP12.26□□□□□ -0.45
H3F3B-213ENST00000593254 ZFAND5O76080 213 aa12.26□□□□□ -0.45
H3F3B-213ENST00000593254 SIX3O95343 332 aaPredicted RBP12.26□□□□□ -0.45
H3F3B-213ENST00000593254 IFNA16P05015 189 aa12.26□□□□□ -0.45
H3F3B-213ENST00000593254 CTAGE8P0CG41 777 aa12.26□□□□□ -0.45
H3F3B-213ENST00000593254 ZNF24P17028 368 aa12.26□□□□□ -0.45
H3F3B-213ENST00000593254 SERPINB9P50453 376 aa12.26□□□□□ -0.45
H3F3B-213ENST00000593254 ARFIP1P53367 373 aa12.26□□□□□ -0.45
H3F3B-213ENST00000593254 IGLV3-21P80748 117 aaPredicted RBP12.26□□□□□ -0.45
H3F3B-213ENST00000593254 DDX39BQ13838 428 aaKnown RBP12.26□□□□□ -0.45
H3F3B-213ENST00000593254 GTF2H2Q13888 395 aa12.26□□□□□ -0.45
H3F3B-213ENST00000593254 RNFT1Q5M7Z0 435 aa12.26□□□□□ -0.45
H3F3B-213ENST00000593254 OR4C11Q6IEV9 310 aa12.26□□□□□ -0.45
H3F3B-213ENST00000593254 GTF2H2CQ6P1K8 395 aa12.26□□□□□ -0.45
H3F3B-213ENST00000593254 Q6ZPB1 254 aaPredicted RBP12.26□□□□□ -0.45
H3F3B-213ENST00000593254 GOLGA7Q7Z5G4 137 aa12.26□□□□□ -0.45
H3F3B-213ENST00000593254 CTAGE4Q8IX94 777 aa12.26□□□□□ -0.45
H3F3B-213ENST00000593254 MMP21Q8N119 569 aa12.26□□□□□ -0.45
H3F3B-213ENST00000593254 CYP4Z2PQ8N1L4 340 aa12.26□□□□□ -0.45
H3F3B-213ENST00000593254 ZCCHC7Q8N3Z6 543 aaKnown RBP12.26□□□□□ -0.45
H3F3B-213ENST00000593254 TMEM156Q8N614 296 aa12.26□□□□□ -0.45
H3F3B-213ENST00000593254 CPSF7Q8N684 471 aaKnown RBP12.26□□□□□ -0.45
H3F3B-213ENST00000593254 L3MBTL4Q8NA19 623 aa12.26□□□□□ -0.45
H3F3B-213ENST00000593254 POGLUT1Q8NBL1 392 aa12.26□□□□□ -0.45
H3F3B-213ENST00000593254 MORN4Q8NDC4 146 aa12.26□□□□□ -0.45
H3F3B-213ENST00000593254 CHTF18Q8WVB6 975 aa12.26□□□□□ -0.45
H3F3B-213ENST00000593254 IFT81Q8WYA0 676 aa12.26□□□□□ -0.45
H3F3B-213ENST00000593254 RGMAQ96B86 450 aa12.26□□□□□ -0.45
H3F3B-213ENST00000593254 ANKRD9Q96BM1 317 aaPredicted RBP12.26□□□□□ -0.45
H3F3B-213ENST00000593254 MTERF1Q99551 399 aaKnown RBP12.26□□□□□ -0.45
H3F3B-213ENST00000593254 TMUB1Q9BVT8 246 aa12.26□□□□□ -0.45
H3F3B-213ENST00000593254 SORBS1Q9BX66 1292 aaKnown RBP12.26□□□□□ -0.45
H3F3B-213ENST00000593254 VPS11Q9H270 941 aa12.26□□□□□ -0.45
H3F3B-213ENST00000593254 IPPKQ9H8X2 491 aa12.26□□□□□ -0.45
H3F3B-213ENST00000593254 PRM3Q9NNZ6 103 aa12.26□□□□□ -0.45
H3F3B-213ENST00000593254 ZNF358Q9NW07 568 aa12.26□□□□□ -0.45
H3F3B-213ENST00000593254 CPSF2Q9P2I0 782 aaKnown RBP12.26□□□□□ -0.45
H3F3B-213ENST00000593254 MYOTQ9UBF9 498 aa12.26□□□□□ -0.45
H3F3B-213ENST00000593254 TINAGQ9UJW2 476 aa12.26□□□□□ -0.45
H3F3B-213ENST00000593254 YARS2Q9Y2Z4 477 aaKnown RBP12.26□□□□□ -0.45
H3F3B-213ENST00000593254 NSD1Q96L73 2696 aaPredicted RBP12.26□□□□□ -0.45
H3F3B-213ENST00000593254 C17orf105B2RV13 164 aa12.25□□□□□ -0.45
H3F3B-213ENST00000593254 PLPP1O14494 284 aa12.25□□□□□ -0.45
H3F3B-213ENST00000593254 ASNA1O43681 348 aa12.25□□□□□ -0.45
H3F3B-213ENST00000593254 TUBB4AP04350 444 aa12.25□□□□□ -0.45
H3F3B-213ENST00000593254 CPN2P22792 545 aa12.25□□□□□ -0.45
H3F3B-213ENST00000593254 PIK3CGP48736 1102 aa12.25□□□□□ -0.45
H3F3B-213ENST00000593254 SSR4P51571 173 aa12.25□□□□□ -0.45
H3F3B-213ENST00000593254 RAP1GDS1P52306 607 aa12.25□□□□□ -0.45
H3F3B-213ENST00000593254 CASP6P55212 293 aa12.25□□□□□ -0.45
H3F3B-213ENST00000593254 RPS13P62277 151 aaKnown RBP12.25□□□□□ -0.45
H3F3B-213ENST00000593254 ID2Q02363 134 aa12.25□□□□□ -0.45
H3F3B-213ENST00000593254 CPSF6Q16630 551 aaKnown RBP eCLIP12.25□□□□□ -0.455e-12■□□□□ 8.2
H3F3B-213ENST00000593254 HSDL2Q6YN16 418 aa12.25□□□□□ -0.45
H3F3B-213ENST00000593254 C16orf47Q6ZP98 133 aaPredicted RBP12.25□□□□□ -0.45
H3F3B-213ENST00000593254 TAOK1Q7L7X3 1001 aa12.25□□□□□ -0.45
H3F3B-213ENST00000593254 MDGA2Q7Z553 956 aa12.25□□□□□ -0.45
H3F3B-213ENST00000593254 SPPL2CQ8IUH8 684 aa12.25□□□□□ -0.45
H3F3B-213ENST00000593254 CHERPQ8IWX8 916 aaKnown RBP12.25□□□□□ -0.45
H3F3B-213ENST00000593254 GHDCQ8N2G8 530 aa12.25□□□□□ -0.45
H3F3B-213ENST00000593254 C7orf57Q8NEG2 295 aa12.25□□□□□ -0.45
H3F3B-213ENST00000593254 OR8K3Q8NH51 312 aa12.25□□□□□ -0.45
H3F3B-213ENST00000593254 WDR20Q8TBZ3 569 aa12.25□□□□□ -0.45
H3F3B-213ENST00000593254 SLC2A12Q8TD20 617 aa12.25□□□□□ -0.45
H3F3B-213ENST00000593254 REPS1Q96D71 796 aa12.25□□□□□ -0.45
H3F3B-213ENST00000593254 MAGED4Q96JG8 741 aa12.25□□□□□ -0.45
H3F3B-213ENST00000593254 CENPKQ9BS16 269 aa12.25□□□□□ -0.45
H3F3B-213ENST00000593254 ZNF717Q9BY31 904 aaPredicted RBP12.25□□□□□ -0.45
H3F3B-213ENST00000593254 OR8D2Q9GZM6 311 aa12.25□□□□□ -0.45
H3F3B-213ENST00000593254 MS4A12Q9NXJ0 267 aa12.25□□□□□ -0.45
H3F3B-213ENST00000593254 ZNF180Q9UJW8 692 aa12.25□□□□□ -0.45
H3F3B-213ENST00000593254 IKBKGQ9Y6K9 419 aa12.25□□□□□ -0.45
H3F3B-213ENST00000593254 KLRC4-KLRK1H3BQV0 150 aa12.24□□□□□ -0.45
H3F3B-213ENST00000593254 STX16-NPEPL1H3BU86 382 aa12.24□□□□□ -0.45
H3F3B-213ENST00000593254 KIF2AO00139 706 aaPredicted RBP12.24□□□□□ -0.45
H3F3B-213ENST00000593254 STX16O14662 325 aa12.24□□□□□ -0.45
H3F3B-213ENST00000593254 FGF17O60258 216 aa12.24□□□□□ -0.45
H3F3B-213ENST00000593254 OR2J2O76002 312 aa12.24□□□□□ -0.45
H3F3B-213ENST00000593254 RBP1P09455 135 aa12.24□□□□□ -0.45
H3F3B-213ENST00000593254 ESRRAP11474 423 aaPredicted RBP12.24□□□□□ -0.45
H3F3B-213ENST00000593254 COL6A2P12110 1019 aa12.24□□□□□ -0.45
H3F3B-213ENST00000593254 PTX3P26022 381 aaPredicted RBP12.24□□□□□ -0.45
H3F3B-213ENST00000593254 CNTFP26441 200 aa12.24□□□□□ -0.45
H3F3B-213ENST00000593254 MEOX1P50221 254 aa12.24□□□□□ -0.45
H3F3B-213ENST00000593254 HK2P52789 917 aa12.24□□□□□ -0.45
H3F3B-213ENST00000593254 HNRNPH2P55795 449 aaKnown RBP12.24□□□□□ -0.45
H3F3B-213ENST00000593254 PHEXP78562 749 aa12.24□□□□□ -0.45
H3F3B-213ENST00000593254 TNFRSF17Q02223 184 aa12.24□□□□□ -0.45
H3F3B-213ENST00000593254 SLAMF1Q13291 335 aa12.24□□□□□ -0.45
H3F3B-213ENST00000593254 CUL3Q13618 768 aa12.24□□□□□ -0.45
H3F3B-213ENST00000593254 TSNAXIP1Q2TAA8 658 aa12.24□□□□□ -0.45
H3F3B-213ENST00000593254 MRM1Q6IN84 353 aaKnown RBP12.24□□□□□ -0.45
H3F3B-213ENST00000593254 GPR180Q86V85 440 aa12.24□□□□□ -0.45
H3F3B-213ENST00000593254 SULF2Q8IWU5 870 aa12.24□□□□□ -0.45
H3F3B-213ENST00000593254 GPALPP1Q8IXQ4 340 aa12.24□□□□□ -0.45
H3F3B-213ENST00000593254 ZNF321PQ8N8H1 164 aa12.24□□□□□ -0.45
H3F3B-213ENST00000593254 PTGR2Q8N8N7 351 aaPredicted RBP12.24□□□□□ -0.45
H3F3B-213ENST00000593254 ZFP62Q8NB50 900 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms