RNA–Protein interactions for RNA: ENST00000592546.5

RFX2-222, Transcript of regulatory factor X2, human

APPRIS ALT1 TSL 2 BASIC

Gene RFX2, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-222	ENST00000592546	ORC5	O43913	435 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	TSC22D2	O75157	780 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	RFPL3	O75679	317 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	ABLIM3	O94929	683 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	CLDN7	O95471	211 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	TRBC1	P01850	177 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	MVD	P53602	400 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	ZNF91	Q05481	1191 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	ELOA	Q14241	798 aa	Known RBP	13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	ANGPT1	Q15389	498 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	ZNF770	Q6IQ21	691 aa	Predicted RBP	13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	PDZD3	Q86UT5	571 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	NPAS3	Q8IXF0	933 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	ARL14EP	Q8N8R7	260 aa	Predicted RBP	13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	MAGEB10	Q96LZ2	347 aa	Predicted RBP	13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	MED18	Q9BUE0	208 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	NMNAT1	Q9HAN9	279 aa	Predicted RBP	13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	B3GAT2	Q9NPZ5	323 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	C12orf4	Q9NQ89	552 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	NDOR1	Q9UHB4	597 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	BACE2	Q9Y5Z0	518 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	SCN5A	Q14524	2016 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	SMIM30	A4D0T7	59 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	SNTN	A6NMZ2	147 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	GABRR3	A8MPY1	467 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	GREM1	O60565	184 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	PLOD3	O60568	738 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	ETFA	P13804	333 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	TNNI3	P19429	210 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	NFATC2	Q13469	925 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	GANAB	Q14697	944 aa	Known RBP	13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	MFSD13A	Q14CX5	517 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	P2RY14	Q15391	338 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	COX20	Q5RI15	118 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	TXNDC8	Q6A555	127 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	CNIH2	Q6PI25	160 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	TEX261	Q6UWH6	196 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	MACC1	Q6ZN28	852 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	DEFB128	Q7Z7B8	93 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	GPR65	Q8IYL9	337 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	AP3S1	Q92572	193 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	AKAP1	Q92667	903 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	TMEM203	Q969S6	136 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	MYO19	Q96H55	970 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	IGSF21	Q96ID5	467 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	KCTD7	Q96MP8	289 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	STOML2	Q9UJZ1	356 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	CLEC4E	Q9ULY5	219 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	13.77	□□□□□ -0.21
RFX2-222	ENST00000592546		U3KQ87	197 aa		13.77	□□□□□ -0.21
RFX2-222	ENST00000592546	HOXA2	O43364	376 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	CPE	P16870	476 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	AOAH	P28039	575 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	FEN1	P39748	380 aa	Known RBP	13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	CRAT	P43155	626 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	STK19	P49842	368 aa	Predicted RBP	13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	ATN1	P54259	1190 aa	Predicted RBP	13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	CASP9	P55211	416 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	RGS1	Q08116	209 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	NFE2L1	Q14494	772 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	SF1	Q15637	639 aa	Known RBP	13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	TMIGD1	Q6UXZ0	262 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	ADGRG2	Q8IZP9	1017 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	ZNF680	Q8NEM1	530 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	GEMIN6	Q8WXD5	167 aa	Known RBP	13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	AUTS2	Q8WXX7	1259 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	KCNJ15	Q99712	375 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	TMEM43	Q9BTV4	400 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	ZFYVE1	Q9HBF4	777 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	RPL36	Q9Y3U8	105 aa	Known RBP	13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	TRBV5-4	A0A0C4DH59	114 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	PRAMEF33	A0A0G2JMD5	474 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	FAM227A	F5H4B4	570 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546		I3L521	148 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	PRAMEF10	O60809	474 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	ZNF250	P15622	560 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	DDX5	P17844	614 aa	Known RBP	13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	ACRV1	P26436	265 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	SLC6A12	P48065	614 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	PPP3R1	P63098	170 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	FOXD4	Q12950	439 aa	Predicted RBP	13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	CDH18	Q13634	790 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	SUZ12	Q15022	739 aa	Known RBP	13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	LEXM	Q3ZCV2	418 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	FLYWCH1	Q4VC44	716 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	CPTP	Q5TA50	214 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	ANKRD54	Q6NXT1	300 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	WDR53	Q7Z5U6	358 aa	Predicted RBP	13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	TMCO2	Q7Z6W1	182 aa	Predicted RBP	13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	SYT14	Q8NB59	555 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	SLC37A3	Q8NCC5	494 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	TSSK6	Q9BXA6	273 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	RERGL	Q9H628	205 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	VPS29	Q9UBQ0	182 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	RUVBL1	Q9Y265	456 aa	Known RBP	13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	CDH10	Q9Y6N8	788 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	ENPP4	Q9Y6X5	453 aa		13.76	□□□□□ -0.21
RFX2-222	ENST00000592546	LOC102723532	A0A0G2JNH3	316 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms