RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 CSTF3Q12996 717 aaKnown RBP9.41□□□□□ -0.9
BRCA1-227ENST00000591849 TERF2Q15554 542 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 TCHHL1Q5QJ38 904 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-227ENST00000591849 CEP85LQ5SZL2 805 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 C6orf163Q5TEZ5 329 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 ACSM2BQ68CK6 577 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 SCIMPQ6UWF3 145 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 FAM180AQ6UWF9 173 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 COMMD6Q7Z4G1 85 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 C10orf107Q8IVU9 208 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 METTL4Q8N3J2 472 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 BANPQ8N9N5 519 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 Q8NA96 180 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 MORN4Q8NDC4 146 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 NFAM1Q8NET5 270 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-227ENST00000591849 OR14A16Q8NHC5 309 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 ELP5Q8TE02 316 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 THAP3Q8WTV1 239 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-227ENST00000591849 NCLNQ969V3 563 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 SNRNP40Q96DI7 357 aaKnown RBP9.41□□□□□ -0.9
BRCA1-227ENST00000591849 C5orf34Q96MH7 638 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 HBEGFQ99075 208 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 PELOQ9BRX2 385 aaKnown RBP9.41□□□□□ -0.9
BRCA1-227ENST00000591849 TMEM109Q9BVC6 243 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 FAIM2Q9BWQ8 316 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 SHCBP1LQ9BZQ2 653 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 GSTO2Q9H4Y5 243 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 OXSMQ9NWU1 459 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 ANKRD10Q9NXR5 420 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 SENP1Q9P0U3 644 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 VTI1BQ9UEU0 232 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 ADAM29Q9UKF5 820 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 PSME2Q9UL46 239 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 FIS1Q9Y3D6 152 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 ASB4Q9Y574 426 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 CSAG2Q9Y5P2 127 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 PCSK5Q92824 1860 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 SPTAN1Q13813 2472 aaKnown RBP9.4□□□□□ -0.9
BRCA1-227ENST00000591849 GNG14A0A1W2PPG7 69 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 A0A1W2PR48 441 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 TMPRSS11DO60235 418 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 FGF17O60258 216 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 AIFM1O95831 613 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 CD46P15529 392 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 STT3AP46977 705 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 ALDH9A1P49189 494 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 ST13P50502 369 aaKnown RBP9.4□□□□□ -0.9
BRCA1-227ENST00000591849 TNFSF10P50591 281 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 FOLH1Q04609 750 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 OR1C1Q15619 314 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 PRR30Q53SZ7 412 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-227ENST00000591849 ZNF766Q5HY98 468 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 OR52E8Q6IFG1 317 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 MRM1Q6IN84 353 aaKnown RBP9.4□□□□□ -0.9
BRCA1-227ENST00000591849 H3F3CQ6NXT2 135 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 HSDL2Q6YN16 418 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 FRMD7Q6ZUT3 714 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 LGI4Q8N135 537 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 TMEM156Q8N614 296 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 C1orf52Q8N6N3 182 aaKnown RBP9.4□□□□□ -0.9
BRCA1-227ENST00000591849 GALNT11Q8NCW6 608 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 OR4K14Q8NGD5 310 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 OR5L2Q8NGL0 311 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 TCP10LQ8TDR4 215 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 AGAP11Q8TF27 550 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 TMEM125Q96AQ2 219 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 MIB2Q96AX9 1013 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 ANKRD9Q96BM1 317 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-227ENST00000591849 PPWD1Q96BP3 646 aaKnown RBP9.4□□□□□ -0.9
BRCA1-227ENST00000591849 ZBTB9Q96C00 473 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 C19orf60Q96EN9 201 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 ART5Q96L15 291 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 KCNA7Q96RP8 456 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 RNF32Q9H0A6 362 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 EML4Q9HC35 981 aaKnown RBP9.4□□□□□ -0.9
BRCA1-227ENST00000591849 KCNK9Q9NPC2 374 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 RRAGDQ9NQL2 400 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-227ENST00000591849 PFDN4Q9NQP4 134 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 KLHL1Q9NR64 748 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 ASF1BQ9NVP2 202 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.4□□□□□ -0.9
BRCA1-227ENST00000591849 MKS1Q9NXB0 559 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 ZNF225Q9UK10 706 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 PCDHGA10Q9Y5H3 936 aa9.4□□□□□ -0.9
BRCA1-227ENST00000591849 RP1L1Q8IWN7 2480 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-227ENST00000591849 GOLGA6L10A6NI86 522 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 TGFBR3LH3BV60 316 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 PGRMC2O15173 223 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 PCDH7O60245 1069 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 PRKRAO75569 313 aaKnown RBP9.39□□□□□ -0.91
BRCA1-227ENST00000591849 ERAL1O75616 437 aaKnown RBP9.39□□□□□ -0.91
BRCA1-227ENST00000591849 RASAL1O95294 804 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 UROSP10746 265 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 TPP2P29144 1249 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-227ENST00000591849 SERPINB3P29508 390 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 ALDH3A1P30838 453 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 CD96P40200 585 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 CYB561P49447 251 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 XKP51811 444 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 MLF1P58340 268 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms